RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 ZNF687Q8N1G0 1237 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 THEM5Q8N1Q8 247 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 GLIS3Q8NEA6 775 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 C2orf15Q8WU43 125 aaKnown RBP12.19□□□□□ -0.46
CLCF1-202ENST00000533438 IRF7Q92985 503 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 NELL2Q99435 816 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 BCO2Q9BYV7 579 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 LRRC27Q9C0I9 530 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 PCIF1Q9H4Z3 704 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 BRD9Q9H8M2 597 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 RBAKQ9NYW8 714 aaPredicted RBP12.19□□□□□ -0.46
CLCF1-202ENST00000533438 RCOR1Q9UKL0 485 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 GOLGA8IPA6NC78 632 aa12.18□□□□□ -0.46
CLCF1-202ENST00000533438 GOLGA8JA6NMD2 632 aa12.18□□□□□ -0.46
CLCF1-202ENST00000533438 HEPACAM2A8MVW5 462 aa12.18□□□□□ -0.46
CLCF1-202ENST00000533438 KIAA0391O15091 583 aaKnown RBP12.18□□□□□ -0.46
CLCF1-202ENST00000533438 EXTL3O43909 919 aa12.18□□□□□ -0.46
CLCF1-202ENST00000533438 FGF19O95750 216 aa12.18□□□□□ -0.46
CLCF1-202ENST00000533438 POLR2BP30876 1174 aaKnown RBP12.18□□□□□ -0.46
CLCF1-202ENST00000533438 GDI1P31150 447 aa12.18□□□□□ -0.46
CLCF1-202ENST00000533438 RPS9P46781 194 aaKnown RBP12.18□□□□□ -0.46
CLCF1-202ENST00000533438 TFAMQ00059 246 aaKnown RBP12.18□□□□□ -0.46
CLCF1-202ENST00000533438 EHHADHQ08426 723 aa12.18□□□□□ -0.46
CLCF1-202ENST00000533438 ITIH5Q86UX2 942 aa12.18□□□□□ -0.46
CLCF1-202ENST00000533438 GPD1LQ8N335 351 aa12.18□□□□□ -0.46
CLCF1-202ENST00000533438 LRRC52Q8N7C0 313 aa12.18□□□□□ -0.46
CLCF1-202ENST00000533438 SUMF1Q8NBK3 374 aa12.18□□□□□ -0.46
CLCF1-202ENST00000533438 SPPL2BQ8TCT7 592 aa12.18□□□□□ -0.46
CLCF1-202ENST00000533438 CACTINQ8WUQ7 758 aaKnown RBP12.18□□□□□ -0.46
CLCF1-202ENST00000533438 LEO1Q8WVC0 666 aaPredicted RBP12.18□□□□□ -0.46
CLCF1-202ENST00000533438 HPS3Q969F9 1004 aa12.18□□□□□ -0.46
CLCF1-202ENST00000533438 E2F7Q96AV8 911 aa12.18□□□□□ -0.46
CLCF1-202ENST00000533438 RSPRY1Q96DX4 576 aa12.18□□□□□ -0.46
CLCF1-202ENST00000533438 SEPT5Q99719 369 aaPredicted RBP12.18□□□□□ -0.46
CLCF1-202ENST00000533438 LPIN3Q9BQK8 851 aa12.18□□□□□ -0.46
CLCF1-202ENST00000533438 SLITRK6Q9H5Y7 841 aa12.18□□□□□ -0.46
CLCF1-202ENST00000533438 SIX4Q9UIU6 781 aa12.18□□□□□ -0.46
CLCF1-202ENST00000533438 ITGA11Q9UKX5 1188 aa12.18□□□□□ -0.46
CLCF1-202ENST00000533438 AGAP1Q9UPQ3 857 aa12.18□□□□□ -0.46
CLCF1-202ENST00000533438 MRPS17Q9Y2R5 130 aaKnown RBP12.18□□□□□ -0.46
CLCF1-202ENST00000533438 R4GN57 208 aa12.18□□□□□ -0.46
CLCF1-202ENST00000533438 GREB1Q4ZG55 1949 aa12.17□□□□□ -0.46
CLCF1-202ENST00000533438 MAN2B1O00754 1011 aa12.17□□□□□ -0.46
CLCF1-202ENST00000533438 EIF3DO15371 548 aaKnown RBP eCLIP12.17□□□□□ -0.46
CLCF1-202ENST00000533438 NCAM2O15394 837 aa12.17□□□□□ -0.46
CLCF1-202ENST00000533438 HAPLN1P10915 354 aaPredicted RBP12.17□□□□□ -0.46
CLCF1-202ENST00000533438 GABRR2P28476 465 aa12.17□□□□□ -0.46
CLCF1-202ENST00000533438 WEE1P30291 646 aa12.17□□□□□ -0.46
CLCF1-202ENST00000533438 HOXD13P35453 343 aa12.17□□□□□ -0.46
CLCF1-202ENST00000533438 AMPD3Q01432 767 aa12.17□□□□□ -0.46
CLCF1-202ENST00000533438 FCHO2Q0JRZ9 810 aa12.17□□□□□ -0.46
CLCF1-202ENST00000533438 ZNF528Q3MIS6 628 aa12.17□□□□□ -0.46
CLCF1-202ENST00000533438 MGAT5BQ3V5L5 792 aa12.17□□□□□ -0.46
CLCF1-202ENST00000533438 ZC3H14Q6PJT7 736 aaKnown RBP12.17□□□□□ -0.46
CLCF1-202ENST00000533438 STXBP4Q6ZWJ1 553 aa12.17□□□□□ -0.46
CLCF1-202ENST00000533438 EPM2AIP1Q7L775 607 aaPredicted RBP12.17□□□□□ -0.46
CLCF1-202ENST00000533438 ARID3BQ8IVW6 561 aaPredicted RBP12.17□□□□□ -0.46
CLCF1-202ENST00000533438 DCP1BQ8IZD4 617 aaKnown RBP12.17□□□□□ -0.46
CLCF1-202ENST00000533438 PDCL2Q8N4E4 241 aa12.17□□□□□ -0.46
CLCF1-202ENST00000533438 KCNG4Q8TDN1 519 aa12.17□□□□□ -0.46
CLCF1-202ENST00000533438 DHX58Q96C10 678 aa12.17□□□□□ -0.46
CLCF1-202ENST00000533438 FAM84AQ96KN4 292 aa12.17□□□□□ -0.46
CLCF1-202ENST00000533438 SPATA32Q96LK8 384 aa12.17□□□□□ -0.46
CLCF1-202ENST00000533438 MTMR12Q9C0I1 747 aa12.17□□□□□ -0.46
CLCF1-202ENST00000533438 ATXN3LQ9H3M9 355 aa12.17□□□□□ -0.46
CLCF1-202ENST00000533438 IL21Q9HBE4 155 aa12.17□□□□□ -0.46
CLCF1-202ENST00000533438 PDE11AQ9HCR9 933 aa12.17□□□□□ -0.46
CLCF1-202ENST00000533438 TMLHEQ9NVH6 421 aa12.17□□□□□ -0.46
CLCF1-202ENST00000533438 GDAP2Q9NXN4 497 aa12.17□□□□□ -0.46
CLCF1-202ENST00000533438 FBXO4Q9UKT5 387 aa12.17□□□□□ -0.46
CLCF1-202ENST00000533438 L1RE1Q9UN81 338 aa12.17□□□□□ -0.46
CLCF1-202ENST00000533438 KMT2BQ9UMN6 2715 aaPredicted RBP12.17□□□□□ -0.46
CLCF1-202ENST00000533438 ZNF638Q14966 1978 aaKnown RBP12.17□□□□□ -0.46
CLCF1-202ENST00000533438 PTPRDP23468 1912 aa12.17□□□□□ -0.46
CLCF1-202ENST00000533438 PTPRJQ12913 1337 aa12.16□□□□□ -0.46
CLCF1-202ENST00000533438 ANAPC1Q9H1A4 1944 aa12.16□□□□□ -0.46
CLCF1-202ENST00000533438 GOLGA6L22H0YM25 854 aa12.16□□□□□ -0.46
CLCF1-202ENST00000533438 ZNF263O14978 683 aa12.16□□□□□ -0.46
CLCF1-202ENST00000533438 CHADO15335 359 aa12.16□□□□□ -0.46
CLCF1-202ENST00000533438 LAMTOR5O43504 91 aa12.16□□□□□ -0.46
CLCF1-202ENST00000533438 CDR1P51861 262 aa12.16□□□□□ -0.46
CLCF1-202ENST00000533438 MLLT6P55198 1093 aaPredicted RBP12.16□□□□□ -0.46
CLCF1-202ENST00000533438 VEPH1Q14D04 833 aa12.16□□□□□ -0.46
CLCF1-202ENST00000533438 TMEM86AQ8N2M4 240 aa12.16□□□□□ -0.46
CLCF1-202ENST00000533438 CSGALNACT2Q8N6G5 542 aa12.16□□□□□ -0.46
CLCF1-202ENST00000533438 IQUBQ8NA54 791 aa12.16□□□□□ -0.46
CLCF1-202ENST00000533438 SPATA18Q8TC71 538 aa12.16□□□□□ -0.46
CLCF1-202ENST00000533438 ZNF507Q8TCN5 953 aa12.16□□□□□ -0.46
CLCF1-202ENST00000533438 RUBCNQ92622 972 aa12.16□□□□□ -0.46
CLCF1-202ENST00000533438 NELL1Q92832 810 aa12.16□□□□□ -0.46
CLCF1-202ENST00000533438 LRRC3BQ96PB8 259 aa12.16□□□□□ -0.46
CLCF1-202ENST00000533438 PKMYT1Q99640 499 aa12.16□□□□□ -0.46
CLCF1-202ENST00000533438 C7orf25Q9BPX7 421 aa12.16□□□□□ -0.46
CLCF1-202ENST00000533438 ACBD6Q9BR61 282 aa12.16□□□□□ -0.46
CLCF1-202ENST00000533438 MAGEF1Q9HAY2 307 aa12.16□□□□□ -0.46
CLCF1-202ENST00000533438 GDPD2Q9HCC8 539 aa12.16□□□□□ -0.46
CLCF1-202ENST00000533438 INTS13Q9NVM9 706 aa12.16□□□□□ -0.46
CLCF1-202ENST00000533438 SPATA6Q9NWH7 488 aaPredicted RBP12.16□□□□□ -0.46
CLCF1-202ENST00000533438 OBP2AQ9NY56 170 aa12.16□□□□□ -0.46
CLCF1-202ENST00000533438 ABI2Q9NYB9 513 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms