RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 BAG2O95816 211 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 ITGB3P05106 788 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 JMJD7P0C870 316 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 GOLGA8HP0CJ92 632 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 PDE6AP16499 860 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 KRT15P19012 456 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 SFPQP23246 707 aaKnown RBP eCLIP5.88□□□□□ -1.47
CD44-236ENST00000533222 IGFALSP35858 605 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 MC3RP41968 323 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 SLC6A11P48066 632 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 TRAPPC10P48553 1259 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 EPHB3P54753 998 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 JAM2P57087 298 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 S100A12P80511 92 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 SRSF3P84103 164 aaKnown RBP5.88□□□□□ -1.47
CD44-236ENST00000533222 DNAJC3Q13217 504 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 NR1I3Q14994 352 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 ARL13BQ3SXY8 428 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 CCNJQ5T5M9 372 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 RNASEH2BQ5TBB1 312 aaKnown RBP5.88□□□□□ -1.47
CD44-236ENST00000533222 ZNF658Q5TYW1 1059 aaPredicted RBP5.88□□□□□ -1.47
CD44-236ENST00000533222 DENND2CQ68D51 928 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 GRAMD4Q6IC98 578 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 FAM171BQ6P995 826 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 ZC3H14Q6PJT7 736 aaKnown RBP5.88□□□□□ -1.47
CD44-236ENST00000533222 DSTYKQ6XUX3 929 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 MCM10Q7L590 875 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 SLC51BQ86UW2 128 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 CROCCP3Q8IVE0 287 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 ARRDC4Q8NCT1 418 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 NSMCE1Q8WV22 266 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 FBXW5Q969U6 566 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 TMA16Q96EY4 203 aaKnown RBP5.88□□□□□ -1.47
CD44-236ENST00000533222 CCDC42Q96M95 316 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 MTMR9Q96QG7 549 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 SYT3Q9BQG1 590 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 RIOK1Q9BRS2 568 aaKnown RBP5.88□□□□□ -1.47
CD44-236ENST00000533222 KLHL4Q9C0H6 718 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 YIPF3Q9GZM5 350 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 DRC3Q9H069 523 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 C8orf33Q9H7E9 229 aaPredicted RBP5.88□□□□□ -1.47
CD44-236ENST00000533222 CNTD2Q9H8S5 307 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 SMURF1Q9HCE7 757 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 CATSPERZQ9NTU4 200 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 SLC5A4Q9NY91 659 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 KIF17Q9P2E2 1029 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 LARSQ9P2J5 1176 aaKnown RBP5.88□□□□□ -1.47
CD44-236ENST00000533222 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.88□□□□□ -1.47
CD44-236ENST00000533222 MBD1Q9UIS9 605 aaPredicted RBP5.88□□□□□ -1.47
CD44-236ENST00000533222 FGD5Q6ZNL6 1462 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 SHANK2Q9UPX8 1470 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 DISP1Q96F81 1524 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 DNMBPQ6XZF7 1577 aa5.88□□□□□ -1.47
CD44-236ENST00000533222 SYNJ2BP-COX16A0A087WUM0 186 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 A0A087X0B3 334 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 KIF28PB7ZC32 967 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 H3BQF6 201 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 ZNF561-AS1K7EIQ3 104 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 FBXO21O94952 628 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 LDHAP00338 332 aaKnown RBP5.87□□□□□ -1.47
CD44-236ENST00000533222 KRT6AP02538 564 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 KRT6BP04259 564 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 ASLP04424 464 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 CCDC192P0DO97 292 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 CYP2C9P11712 490 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 GYS1P13807 737 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 CTRB1P17538 263 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 VCLP18206 1134 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 FBLN1P23142 703 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 RRM1P23921 792 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 TBXAS1P24557 533 aaPredicted RBP5.87□□□□□ -1.47
CD44-236ENST00000533222 PMLP29590 882 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 SLC16A2P36021 539 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 HSD17B2P37059 387 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 SNX16P57768 344 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 TMEM62Q0P6H9 643 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 MESP2Q0VG99 397 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 E2F2Q14209 437 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 PCBP1Q15365 356 aaKnown RBP eCLIP5.87□□□□□ -1.47
CD44-236ENST00000533222 PKN2Q16513 984 aaKnown RBP5.87□□□□□ -1.47
CD44-236ENST00000533222 FBXO43Q4G163 708 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 EMC4Q5J8M3 183 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 FKBP15Q5T1M5 1219 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 RNF187Q5TA31 235 aaPredicted RBP5.87□□□□□ -1.47
CD44-236ENST00000533222 PIK3R6Q5UE93 754 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 DAB2IPQ5VWQ8 1189 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 CTRB2Q6GPI1 263 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 WDR93Q6P2C0 686 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 CORO6Q6QEF8 472 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 CYP26C1Q6V0L0 522 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 PPP1R21Q6ZMI0 780 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 OVCH1Q7RTY7 1134 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 PPP1R42Q7Z4L9 355 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 MILR1Q7Z6M3 343 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 LRRTM3Q86VH5 581 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 OSTM1Q86WC4 334 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 PTRH1Q86Y79 214 aaKnown RBP5.87□□□□□ -1.47
CD44-236ENST00000533222 LRRC8AQ8IWT6 810 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 ANKRD53Q8N9V6 530 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 XXYLT1Q8NBI6 393 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms