RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 P4HA1P13674 534 aa19.7■□□□□ 0.74
SMPD1-208ENST00000533123 CHRNB2P17787 502 aa19.7■□□□□ 0.74
SMPD1-208ENST00000533123 GALCP54803 685 aa19.7■□□□□ 0.74
SMPD1-208ENST00000533123 SV2CQ496J9 727 aa19.7■□□□□ 0.74
SMPD1-208ENST00000533123 DDX27Q96GQ7 796 aaKnown RBP19.7■□□□□ 0.74
SMPD1-208ENST00000533123 NRDE2Q9H7Z3 1164 aa19.7■□□□□ 0.74
SMPD1-208ENST00000533123 PCDHB4Q9Y5E5 795 aa19.7■□□□□ 0.74
SMPD1-208ENST00000533123 CYP11B1P15538 503 aa19.7■□□□□ 0.74
SMPD1-208ENST00000533123 OR1G1P47890 313 aa19.7■□□□□ 0.74
SMPD1-208ENST00000533123 PSRC1Q6PGN9 363 aaPredicted RBP19.7■□□□□ 0.74
SMPD1-208ENST00000533123 TMEM270Q6UE05 265 aa19.7■□□□□ 0.74
SMPD1-208ENST00000533123 PCDHB18PQ96TA0 734 aa19.7■□□□□ 0.74
SMPD1-208ENST00000533123 JRKLQ9Y4A0 524 aa19.7■□□□□ 0.74
SMPD1-208ENST00000533123 SAR1BQ9Y6B6 198 aa19.7■□□□□ 0.74
SMPD1-208ENST00000533123 ITGB1P05556 798 aa19.69■□□□□ 0.74
SMPD1-208ENST00000533123 MMEP08473 750 aa19.69■□□□□ 0.74
SMPD1-208ENST00000533123 ZNF394Q53GI3 561 aa19.69■□□□□ 0.74
SMPD1-208ENST00000533123 FAXDC2Q96IV6 333 aa19.69■□□□□ 0.74
SMPD1-208ENST00000533123 UROC1Q96N76 676 aa19.69■□□□□ 0.74
SMPD1-208ENST00000533123 MRPL9Q9BYD2 267 aaKnown RBP19.69■□□□□ 0.74
SMPD1-208ENST00000533123 LAMA3Q16787 3333 aa19.69■□□□□ 0.74
SMPD1-208ENST00000533123 BTNL10A8MVZ5 291 aa19.68■□□□□ 0.74
SMPD1-208ENST00000533123 ABCB4P21439 1286 aa19.68■□□□□ 0.74
SMPD1-208ENST00000533123 SOWAHAQ2M3V2 549 aa19.68■□□□□ 0.74
SMPD1-208ENST00000533123 UBR7Q8N806 425 aa19.68■□□□□ 0.74
SMPD1-208ENST00000533123 GDAP2Q9NXN4 497 aa19.68■□□□□ 0.74
SMPD1-208ENST00000533123 PRG3Q9Y2Y8 225 aaPredicted RBP19.68■□□□□ 0.74
SMPD1-208ENST00000533123 GRID2IPA4D2P6 1211 aa19.68■□□□□ 0.74
SMPD1-208ENST00000533123 ZNF185O15231 689 aa19.68■□□□□ 0.74
SMPD1-208ENST00000533123 KIF4AO95239 1232 aa19.68■□□□□ 0.74
SMPD1-208ENST00000533123 DCLRE1AQ6PJP8 1040 aa19.68■□□□□ 0.74
SMPD1-208ENST00000533123 CD300LGQ6UXG3 332 aa19.68■□□□□ 0.74
SMPD1-208ENST00000533123 LRRC43Q8N309 656 aa19.68■□□□□ 0.74
SMPD1-208ENST00000533123 CAPZA3Q96KX2 299 aa19.68■□□□□ 0.74
SMPD1-208ENST00000533123 PSMB7Q99436 277 aa19.68■□□□□ 0.74
SMPD1-208ENST00000533123 CYP3A43Q9HB55 503 aa19.68■□□□□ 0.74
SMPD1-208ENST00000533123 PCDHGC5Q9Y5F6 944 aa19.68■□□□□ 0.74
SMPD1-208ENST00000533123 ATP8B3O60423 1300 aa19.67■□□□□ 0.74
SMPD1-208ENST00000533123 I3L4J1 428 aa19.67■□□□□ 0.74
SMPD1-208ENST00000533123 FTCDO95954 541 aa19.67■□□□□ 0.74
SMPD1-208ENST00000533123 PBX3P40426 434 aa19.67■□□□□ 0.74
SMPD1-208ENST00000533123 NOP2P46087 812 aaKnown RBP19.67■□□□□ 0.74
SMPD1-208ENST00000533123 PDE6CP51160 858 aa19.67■□□□□ 0.74
SMPD1-208ENST00000533123 FMO1Q01740 532 aa19.67■□□□□ 0.74
SMPD1-208ENST00000533123 TUBB2AQ13885 445 aa19.67■□□□□ 0.74
SMPD1-208ENST00000533123 WHAMMP3Q1A5X7 153 aa19.67■□□□□ 0.74
SMPD1-208ENST00000533123 TIGD5Q53EQ6 642 aa19.67■□□□□ 0.74
SMPD1-208ENST00000533123 ZNF689Q96CS4 500 aaPredicted RBP19.67■□□□□ 0.74
SMPD1-208ENST00000533123 MRPL45Q9BRJ2 306 aaKnown RBP19.67■□□□□ 0.74
SMPD1-208ENST00000533123 TUBB2BQ9BVA1 445 aa19.67■□□□□ 0.74
SMPD1-208ENST00000533123 GOLPH3Q9H4A6 298 aa19.67■□□□□ 0.74
SMPD1-208ENST00000533123 INTUQ9ULD6 942 aa19.67■□□□□ 0.74
SMPD1-208ENST00000533123 PTPRSQ13332 1948 aa19.67■□□□□ 0.74
SMPD1-208ENST00000533123 EFCAB8A8MWE9 144 aa19.67■□□□□ 0.74
SMPD1-208ENST00000533123 CYB561D2O14569 222 aa19.67■□□□□ 0.74
SMPD1-208ENST00000533123 BRCC3P46736 316 aa19.67■□□□□ 0.74
SMPD1-208ENST00000533123 DSTYKQ6XUX3 929 aa19.67■□□□□ 0.74
SMPD1-208ENST00000533123 RBBP8NLQ8NC74 664 aaPredicted RBP19.67■□□□□ 0.74
SMPD1-208ENST00000533123 DDX1Q92499 740 aaKnown RBP19.67■□□□□ 0.74
SMPD1-208ENST00000533123 SENP8Q96LD8 212 aa19.67■□□□□ 0.74
SMPD1-208ENST00000533123 THAP2Q9H0W7 228 aa19.67■□□□□ 0.74
SMPD1-208ENST00000533123 HMGXB4Q9UGU5 601 aa19.67■□□□□ 0.74
SMPD1-208ENST00000533123 SNX12Q9UMY4 172 aa19.67■□□□□ 0.74
SMPD1-208ENST00000533123 L1RE1Q9UN81 338 aa19.67■□□□□ 0.74
SMPD1-208ENST00000533123 CNTN6Q9UQ52 1028 aa19.67■□□□□ 0.74
SMPD1-208ENST00000533123 NR2E3Q9Y5X4 410 aa19.67■□□□□ 0.74
SMPD1-208ENST00000533123 NRP1O14786 923 aa19.66■□□□□ 0.74
SMPD1-208ENST00000533123 HUS1O60921 280 aa19.66■□□□□ 0.74
SMPD1-208ENST00000533123 ALDH2P05091 517 aa19.66■□□□□ 0.74
SMPD1-208ENST00000533123 ORC1Q13415 861 aa19.66■□□□□ 0.74
SMPD1-208ENST00000533123 APPL2Q8NEU8 664 aa19.66■□□□□ 0.74
SMPD1-208ENST00000533123 RSPH1Q8WYR4 309 aa19.66■□□□□ 0.74
SMPD1-208ENST00000533123 HERVK_113Q902F9 699 aa19.66■□□□□ 0.74
SMPD1-208ENST00000533123 ARHGEF26Q96DR7 871 aa19.66■□□□□ 0.74
SMPD1-208ENST00000533123 TLR10Q9BXR5 811 aa19.66■□□□□ 0.74
SMPD1-208ENST00000533123 EPC1Q9H2F5 836 aa19.66■□□□□ 0.74
SMPD1-208ENST00000533123 RC3H2Q9HBD1 1191 aaKnown RBP19.66■□□□□ 0.74
SMPD1-208ENST00000533123 COL4A6Q14031 1691 aa19.66■□□□□ 0.74
SMPD1-208ENST00000533123 NT5C1B-RDH14C9J2C7 533 aa19.66■□□□□ 0.74
SMPD1-208ENST00000533123 TMEM253P0C7T8 217 aa19.66■□□□□ 0.74
SMPD1-208ENST00000533123 SLC11A1P49279 550 aa19.66■□□□□ 0.74
SMPD1-208ENST00000533123 AARSP49588 968 aaKnown RBP eCLIP19.66■□□□□ 0.74
SMPD1-208ENST00000533123 CDR2Q01850 454 aa19.66■□□□□ 0.74
SMPD1-208ENST00000533123 PTPROQ16827 1216 aa19.66■□□□□ 0.74
SMPD1-208ENST00000533123 TEX35Q5T0J7 233 aa19.66■□□□□ 0.74
SMPD1-208ENST00000533123 COG1Q8WTW3 980 aa19.66■□□□□ 0.74
SMPD1-208ENST00000533123 UBXN4Q92575 508 aa19.66■□□□□ 0.74
SMPD1-208ENST00000533123 TWNKQ96RR1 684 aa19.66■□□□□ 0.74
SMPD1-208ENST00000533123 YME1L1Q96TA2 773 aa19.66■□□□□ 0.74
SMPD1-208ENST00000533123 OSGEPQ9NPF4 335 aa19.66■□□□□ 0.74
SMPD1-208ENST00000533123 PACSIN2Q9UNF0 486 aaPredicted RBP19.66■□□□□ 0.74
SMPD1-208ENST00000533123 TIMM13Q9Y5L4 95 aaPredicted RBP19.66■□□□□ 0.74
SMPD1-208ENST00000533123 CILPO75339 1184 aa19.65■□□□□ 0.74
SMPD1-208ENST00000533123 FTLP02792 175 aaPredicted RBP19.65■□□□□ 0.74
SMPD1-208ENST00000533123 CXCR5P32302 372 aa19.65■□□□□ 0.74
SMPD1-208ENST00000533123 NDST1P52848 882 aa19.65■□□□□ 0.74
SMPD1-208ENST00000533123 YWHAEP62258 255 aaKnown RBP19.65■□□□□ 0.74
SMPD1-208ENST00000533123 BTG3Q14201 252 aaPredicted RBP19.65■□□□□ 0.74
SMPD1-208ENST00000533123 CEP112Q8N8E3 955 aa19.65■□□□□ 0.74
SMPD1-208ENST00000533123 WHAMMQ8TF30 809 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms