RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 SOAT2O75908 522 aa16.48■□□□□ 0.23
CPSF1-210ENST00000532935 STAU1O95793 577 aaKnown RBP16.48■□□□□ 0.23
CPSF1-210ENST00000532935 C4BPAP04003 597 aaKnown RBP16.48■□□□□ 0.23
CPSF1-210ENST00000532935 CEBPBP17676 345 aa16.48■□□□□ 0.23
CPSF1-210ENST00000532935 ACAT1P24752 427 aaKnown RBP16.48■□□□□ 0.23
CPSF1-210ENST00000532935 PRCPP42785 496 aa16.48■□□□□ 0.23
CPSF1-210ENST00000532935 TUFMP49411 452 aaKnown RBP16.48■□□□□ 0.23
CPSF1-210ENST00000532935 MYL6P60660 151 aa16.48■□□□□ 0.23
CPSF1-210ENST00000532935 DLG4P78352 724 aa16.48■□□□□ 0.23
CPSF1-210ENST00000532935 ADAM9Q13443 819 aa16.48■□□□□ 0.23
CPSF1-210ENST00000532935 BIRC3Q13489 604 aa16.48■□□□□ 0.23
CPSF1-210ENST00000532935 HTR4Q13639 388 aa16.48■□□□□ 0.23
CPSF1-210ENST00000532935 EDRF1Q3B7T1 1238 aa16.48■□□□□ 0.23
CPSF1-210ENST00000532935 COBLL1Q53SF7 1204 aa16.48■□□□□ 0.23
CPSF1-210ENST00000532935 INTS6LQ5JSJ4 861 aaKnown RBP16.48■□□□□ 0.23
CPSF1-210ENST00000532935 CYP4A22Q5TCH4 519 aa16.48■□□□□ 0.23
CPSF1-210ENST00000532935 HS6ST3Q8IZP7 471 aa16.48■□□□□ 0.23
CPSF1-210ENST00000532935 SPPL2BQ8TCT7 592 aa16.48■□□□□ 0.23
CPSF1-210ENST00000532935 KBTBD7Q8WVZ9 684 aa16.48■□□□□ 0.23
CPSF1-210ENST00000532935 TCEAL4Q96EI5 215 aa16.48■□□□□ 0.23
CPSF1-210ENST00000532935 ASIC4Q96FT7 647 aa16.48■□□□□ 0.23
CPSF1-210ENST00000532935 MMS19Q96T76 1030 aa16.48■□□□□ 0.23
CPSF1-210ENST00000532935 SEPT5Q99719 369 aaPredicted RBP16.48■□□□□ 0.23
CPSF1-210ENST00000532935 ASAH2Q9NR71 780 aa16.48■□□□□ 0.23
CPSF1-210ENST00000532935 TMLHEQ9NVH6 421 aa16.48■□□□□ 0.23
CPSF1-210ENST00000532935 ABI2Q9NYB9 513 aaPredicted RBP16.48■□□□□ 0.23
CPSF1-210ENST00000532935 DUSP12Q9UNI6 340 aa16.48■□□□□ 0.23
CPSF1-210ENST00000532935 GREB1Q4ZG55 1949 aa16.48■□□□□ 0.23
CPSF1-210ENST00000532935 ZNF318Q5VUA4 2279 aa16.48■□□□□ 0.23
CPSF1-210ENST00000532935 OBSL1O75147 1896 aa16.48■□□□□ 0.23
CPSF1-210ENST00000532935 KMT2EQ8IZD2 1858 aa16.48■□□□□ 0.23
CPSF1-210ENST00000532935 WDFY4Q6ZS81 3184 aa16.47■□□□□ 0.23
CPSF1-210ENST00000532935 HCRTO43612 131 aa16.47■□□□□ 0.23
CPSF1-210ENST00000532935 AKAP3O75969 853 aa16.47■□□□□ 0.23
CPSF1-210ENST00000532935 MICAL2O94851 1124 aa16.47■□□□□ 0.23
CPSF1-210ENST00000532935 COL9A1P20849 921 aa16.47■□□□□ 0.23
CPSF1-210ENST00000532935 PCSK1P29120 753 aa16.47■□□□□ 0.23
CPSF1-210ENST00000532935 ATICP31939 592 aa16.47■□□□□ 0.23
CPSF1-210ENST00000532935 CCR2P41597 374 aa16.47■□□□□ 0.23
CPSF1-210ENST00000532935 EPHA5P54756 1037 aa16.47■□□□□ 0.23
CPSF1-210ENST00000532935 TNNC1P63316 161 aa16.47■□□□□ 0.23
CPSF1-210ENST00000532935 NFE2Q16621 373 aaPredicted RBP16.47■□□□□ 0.23
CPSF1-210ENST00000532935 WDR72Q3MJ13 1102 aa16.47■□□□□ 0.23
CPSF1-210ENST00000532935 MGAT5BQ3V5L5 792 aa16.47■□□□□ 0.23
CPSF1-210ENST00000532935 BMP8AQ7Z5Y6 402 aa16.47■□□□□ 0.23
CPSF1-210ENST00000532935 FAM186BQ8IYM0 893 aa16.47■□□□□ 0.23
CPSF1-210ENST00000532935 SLC44A3Q8N4M1 653 aa16.47■□□□□ 0.23
CPSF1-210ENST00000532935 LEMD2Q8NC56 503 aa16.47■□□□□ 0.23
CPSF1-210ENST00000532935 ST13P5Q8NFI4 369 aaPredicted RBP16.47■□□□□ 0.23
CPSF1-210ENST00000532935 SYAP1Q96A49 352 aaPredicted RBP16.47■□□□□ 0.23
CPSF1-210ENST00000532935 MCRS1Q96EZ8 462 aa16.47■□□□□ 0.23
CPSF1-210ENST00000532935 PKMYT1Q99640 499 aa16.47■□□□□ 0.23
CPSF1-210ENST00000532935 GTPBP4Q9BZE4 634 aaKnown RBP16.47■□□□□ 0.23
CPSF1-210ENST00000532935 XYLT2Q9H1B5 865 aa16.47■□□□□ 0.23
CPSF1-210ENST00000532935 GDE1Q9NZC3 331 aa16.47■□□□□ 0.23
CPSF1-210ENST00000532935 ASB3Q9Y575 518 aa16.47■□□□□ 0.23
CPSF1-210ENST00000532935 PCDHB5Q9Y5E4 795 aa16.47■□□□□ 0.23
CPSF1-210ENST00000532935 NUMBLQ9Y6R0 609 aa16.47■□□□□ 0.23
CPSF1-210ENST00000532935 NUP210Q8TEM1 1887 aaPredicted RBP16.46■□□□□ 0.23
CPSF1-210ENST00000532935 ZNF638Q14966 1978 aaKnown RBP16.46■□□□□ 0.23
CPSF1-210ENST00000532935 NRG2O14511 850 aaPredicted RBP16.46■□□□□ 0.23
CPSF1-210ENST00000532935 IKBKBO14920 756 aa16.46■□□□□ 0.23
CPSF1-210ENST00000532935 VNN1O95497 513 aa16.46■□□□□ 0.23
CPSF1-210ENST00000532935 HAPLN1P10915 354 aaPredicted RBP16.46■□□□□ 0.23
CPSF1-210ENST00000532935 MYL4P12829 197 aa16.46■□□□□ 0.23
CPSF1-210ENST00000532935 WARSP23381 471 aaKnown RBP16.46■□□□□ 0.23
CPSF1-210ENST00000532935 PSMC2P35998 433 aaKnown RBP16.46■□□□□ 0.23
CPSF1-210ENST00000532935 VAMP7P51809 220 aa16.46■□□□□ 0.23
CPSF1-210ENST00000532935 UBE2HP62256 183 aa16.46■□□□□ 0.23
CPSF1-210ENST00000532935 NCOA4Q13772 614 aa16.46■□□□□ 0.23
CPSF1-210ENST00000532935 ZACNQ401N2 412 aa16.46■□□□□ 0.23
CPSF1-210ENST00000532935 C1orf220Q5T0J3 134 aa16.46■□□□□ 0.23
CPSF1-210ENST00000532935 PARM1Q6UWI2 310 aa16.46■□□□□ 0.23
CPSF1-210ENST00000532935 INTS8Q75QN2 995 aaKnown RBP16.46■□□□□ 0.23
CPSF1-210ENST00000532935 MTSS1LQ765P7 747 aa16.46■□□□□ 0.23
CPSF1-210ENST00000532935 DNAJB7Q7Z6W7 309 aaPredicted RBP16.46■□□□□ 0.23
CPSF1-210ENST00000532935 ITIH5Q86UX2 942 aa16.46■□□□□ 0.23
CPSF1-210ENST00000532935 TMC8Q8IU68 726 aa16.46■□□□□ 0.23
CPSF1-210ENST00000532935 FGF14Q92915 247 aa16.46■□□□□ 0.23
CPSF1-210ENST00000532935 PSMG2Q969U7 264 aa16.46■□□□□ 0.23
CPSF1-210ENST00000532935 PBXIP1Q96AQ6 731 aa16.46■□□□□ 0.23
CPSF1-210ENST00000532935 LPIN3Q9BQK8 851 aa16.46■□□□□ 0.23
CPSF1-210ENST00000532935 LRRC3Q9BY71 257 aa16.46■□□□□ 0.23
CPSF1-210ENST00000532935 VRTNQ9H8Y1 702 aa16.46■□□□□ 0.23
CPSF1-210ENST00000532935 NXF1Q9UBU9 619 aaKnown RBP16.46■□□□□ 0.23
CPSF1-210ENST00000532935 MAN1B1Q9UKM7 699 aa16.46■□□□□ 0.23
CPSF1-210ENST00000532935 GTF3C4Q9UKN8 822 aa16.46■□□□□ 0.23
CPSF1-210ENST00000532935 ZDBF2Q9HCK1 2354 aa16.46■□□□□ 0.23
CPSF1-210ENST00000532935 NARSO43776 548 aaKnown RBP16.45■□□□□ 0.22
CPSF1-210ENST00000532935 TACC1O75410 805 aa16.45■□□□□ 0.22
CPSF1-210ENST00000532935 MOSPD3O75425 235 aa16.45■□□□□ 0.22
CPSF1-210ENST00000532935 FAM163BP0C2L3 166 aa16.45■□□□□ 0.22
CPSF1-210ENST00000532935 KRT13P13646 458 aa16.45■□□□□ 0.22
CPSF1-210ENST00000532935 ATF6P18850 670 aa16.45■□□□□ 0.22
CPSF1-210ENST00000532935 LMO2P25791 158 aa16.45■□□□□ 0.22
CPSF1-210ENST00000532935 ENPEPQ07075 957 aa16.45■□□□□ 0.22
CPSF1-210ENST00000532935 VEPH1Q14D04 833 aa16.45■□□□□ 0.22
CPSF1-210ENST00000532935 CCDC142Q17RM4 750 aa16.45■□□□□ 0.22
CPSF1-210ENST00000532935 ZNF699Q32M78 642 aa16.45■□□□□ 0.22
CPSF1-210ENST00000532935 ISM2Q6H9L7 571 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms