RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 LPAL2Q16609 132 aa18.44■□□□□ 0.54
RPUSD4-207ENST00000532800 ARHGAP15Q53QZ3 475 aa18.44■□□□□ 0.54
RPUSD4-207ENST00000532800 MAMSTRQ6ZN01 415 aa18.44■□□□□ 0.54
RPUSD4-207ENST00000532800 STKLD1Q8NE28 680 aa18.44■□□□□ 0.54
RPUSD4-207ENST00000532800 SAAL1Q96ER3 474 aa18.44■□□□□ 0.54
RPUSD4-207ENST00000532800 MSANTD3Q96H12 275 aa18.44■□□□□ 0.54
RPUSD4-207ENST00000532800 FAM213AQ9BRX8 229 aa18.44■□□□□ 0.54
RPUSD4-207ENST00000532800 FGFBP2Q9BYJ0 223 aa18.44■□□□□ 0.54
RPUSD4-207ENST00000532800 TASP1Q9H6P5 420 aa18.44■□□□□ 0.54
RPUSD4-207ENST00000532800 C8orf33Q9H7E9 229 aaPredicted RBP18.44■□□□□ 0.54
RPUSD4-207ENST00000532800 MRPL44Q9H9J2 332 aaKnown RBP18.44■□□□□ 0.54
RPUSD4-207ENST00000532800 TMLHEQ9NVH6 421 aa18.44■□□□□ 0.54
RPUSD4-207ENST00000532800 MYBPHLA2RUH7 354 aa18.43■□□□□ 0.54
RPUSD4-207ENST00000532800 KPNA7A9QM74 516 aa18.43■□□□□ 0.54
RPUSD4-207ENST00000532800 HAPLN1P10915 354 aaPredicted RBP18.43■□□□□ 0.54
RPUSD4-207ENST00000532800 CEBPZQ03701 1054 aaKnown RBP18.43■□□□□ 0.54
RPUSD4-207ENST00000532800 TNK2Q07912 1038 aa18.43■□□□□ 0.54
RPUSD4-207ENST00000532800 SV2CQ496J9 727 aa18.43■□□□□ 0.54
RPUSD4-207ENST00000532800 ARHGAP29Q52LW3 1261 aa18.43■□□□□ 0.54
RPUSD4-207ENST00000532800 L1TD1Q5T7N2 865 aaKnown RBP18.43■□□□□ 0.54
RPUSD4-207ENST00000532800 RRAGBQ5VZM2 374 aa18.43■□□□□ 0.54
RPUSD4-207ENST00000532800 SCARA3Q6AZY7 606 aa18.43■□□□□ 0.54
RPUSD4-207ENST00000532800 THEM5Q8N1Q8 247 aa18.43■□□□□ 0.54
RPUSD4-207ENST00000532800 SPPL2BQ8TCT7 592 aa18.43■□□□□ 0.54
RPUSD4-207ENST00000532800 C2orf42Q9NWW7 574 aa18.43■□□□□ 0.54
RPUSD4-207ENST00000532800 OBP2AQ9NY56 170 aa18.43■□□□□ 0.54
RPUSD4-207ENST00000532800 SEL1LQ9UBV2 794 aa18.43■□□□□ 0.54
RPUSD4-207ENST00000532800 CCDC39Q9UFE4 941 aa18.43■□□□□ 0.54
RPUSD4-207ENST00000532800 SRPRBQ9Y5M8 271 aaKnown RBP18.43■□□□□ 0.54
RPUSD4-207ENST00000532800 IL18RAPO95256 599 aa18.42■□□□□ 0.54
RPUSD4-207ENST00000532800 GCNT3O95395 438 aa18.42■□□□□ 0.54
RPUSD4-207ENST00000532800 TGM1P22735 817 aa18.42■□□□□ 0.54
RPUSD4-207ENST00000532800 CDC25CP30307 473 aa18.42■□□□□ 0.54
RPUSD4-207ENST00000532800 POLR2BP30876 1174 aaKnown RBP18.42■□□□□ 0.54
RPUSD4-207ENST00000532800 HOXC13P31276 330 aa18.42■□□□□ 0.54
RPUSD4-207ENST00000532800 CXCL12P48061 93 aa18.42■□□□□ 0.54
RPUSD4-207ENST00000532800 GPR15P49685 360 aa18.42■□□□□ 0.54
RPUSD4-207ENST00000532800 NRLP54845 237 aa18.42■□□□□ 0.54
RPUSD4-207ENST00000532800 TFAMQ00059 246 aaKnown RBP18.42■□□□□ 0.54
RPUSD4-207ENST00000532800 POU5F1Q01860 360 aaKnown RBP18.42■□□□□ 0.54
RPUSD4-207ENST00000532800 LRRC32Q14392 662 aa18.42■□□□□ 0.54
RPUSD4-207ENST00000532800 PPP2R5DQ14738 602 aa18.42■□□□□ 0.54
RPUSD4-207ENST00000532800 POSTNQ15063 836 aa18.42■□□□□ 0.54
RPUSD4-207ENST00000532800 PON2Q15165 354 aa18.42■□□□□ 0.54
RPUSD4-207ENST00000532800 TMEM150AQ86TG1 271 aa18.42■□□□□ 0.54
RPUSD4-207ENST00000532800 BRSK2Q8IWQ3 736 aa18.42■□□□□ 0.54
RPUSD4-207ENST00000532800 BPIFB1Q8TDL5 484 aa18.42■□□□□ 0.54
RPUSD4-207ENST00000532800 C2orf15Q8WU43 125 aaKnown RBP18.42■□□□□ 0.54
RPUSD4-207ENST00000532800 SECISBP2LQ93073 1101 aaKnown RBP18.42■□□□□ 0.54
RPUSD4-207ENST00000532800 ZNF560Q96MR9 790 aa18.42■□□□□ 0.54
RPUSD4-207ENST00000532800 GCNAQ96QF7 691 aa18.42■□□□□ 0.54
RPUSD4-207ENST00000532800 SLC46A2Q9BY10 475 aa18.42■□□□□ 0.54
RPUSD4-207ENST00000532800 PARD6AQ9NPB6 346 aa18.42■□□□□ 0.54
RPUSD4-207ENST00000532800 ZNF638Q14966 1978 aaKnown RBP18.42■□□□□ 0.54
RPUSD4-207ENST00000532800 A0A087X0B3 334 aa18.41■□□□□ 0.54
RPUSD4-207ENST00000532800 GOLGA8IPA6NC78 632 aa18.41■□□□□ 0.54
RPUSD4-207ENST00000532800 GOLGA8JA6NMD2 632 aa18.41■□□□□ 0.54
RPUSD4-207ENST00000532800 CHURC1-FNTBB4DL54 471 aa18.41■□□□□ 0.54
RPUSD4-207ENST00000532800 ITGB3P05106 788 aa18.41■□□□□ 0.54
RPUSD4-207ENST00000532800 GAP43P17677 238 aa18.41■□□□□ 0.54
RPUSD4-207ENST00000532800 FNTBP49356 437 aa18.41■□□□□ 0.54
RPUSD4-207ENST00000532800 SRSF5Q13243 272 aaKnown RBP18.41■□□□□ 0.54
RPUSD4-207ENST00000532800 TAF12Q16514 161 aa18.41■□□□□ 0.54
RPUSD4-207ENST00000532800 C1orf228Q6PIY5 440 aa18.41■□□□□ 0.54
RPUSD4-207ENST00000532800 SV2BQ7L1I2 683 aa18.41■□□□□ 0.54
RPUSD4-207ENST00000532800 RALGPS2Q86X27 583 aaPredicted RBP18.41■□□□□ 0.54
RPUSD4-207ENST00000532800 PDCL2Q8N4E4 241 aa18.41■□□□□ 0.54
RPUSD4-207ENST00000532800 SPEM1Q8N4L4 309 aa18.41■□□□□ 0.54
RPUSD4-207ENST00000532800 C1orf127Q8N9H9 656 aa18.41■□□□□ 0.54
RPUSD4-207ENST00000532800 ACCSQ96QU6 501 aa18.41■□□□□ 0.54
RPUSD4-207ENST00000532800 PI4K2AQ9BTU6 479 aa18.41■□□□□ 0.54
RPUSD4-207ENST00000532800 USP18Q9UMW8 372 aa18.41■□□□□ 0.54
RPUSD4-207ENST00000532800 L1RE1Q9UN81 338 aa18.41■□□□□ 0.54
RPUSD4-207ENST00000532800 EXOC7Q9UPT5 735 aa18.41■□□□□ 0.54
RPUSD4-207ENST00000532800 NCOR2Q9Y618 2525 aa18.41■□□□□ 0.54
RPUSD4-207ENST00000532800 K7ESF4 209 aa18.4■□□□□ 0.54
RPUSD4-207ENST00000532800 IDEP14735 1019 aa18.4■□□□□ 0.54
RPUSD4-207ENST00000532800 HMGA1P17096 107 aaKnown RBP18.4■□□□□ 0.54
RPUSD4-207ENST00000532800 PDCP20941 246 aa18.4■□□□□ 0.54
RPUSD4-207ENST00000532800 SYT1P21579 422 aa18.4■□□□□ 0.54
RPUSD4-207ENST00000532800 WEE1P30291 646 aa18.4■□□□□ 0.54
RPUSD4-207ENST00000532800 TXLNAP40222 546 aa18.4■□□□□ 0.54
RPUSD4-207ENST00000532800 SMARCB1Q12824 385 aa18.4■□□□□ 0.54
RPUSD4-207ENST00000532800 CCDC142Q17RM4 750 aa18.4■□□□□ 0.54
RPUSD4-207ENST00000532800 SDHAF4Q5VUM1 108 aa18.4■□□□□ 0.54
RPUSD4-207ENST00000532800 PRR23BQ6ZRT6 265 aa18.4■□□□□ 0.54
RPUSD4-207ENST00000532800 NT5DC4Q86YG4 428 aa18.4■□□□□ 0.54
RPUSD4-207ENST00000532800 DCP1BQ8IZD4 617 aaKnown RBP18.4■□□□□ 0.54
RPUSD4-207ENST00000532800 USP28Q96RU2 1077 aa18.4■□□□□ 0.54
RPUSD4-207ENST00000532800 CBWD1Q9BRT8 395 aa18.4■□□□□ 0.54
RPUSD4-207ENST00000532800 PANK2Q9BZ23 570 aa18.4■□□□□ 0.54
RPUSD4-207ENST00000532800 OLFML3Q9NRN5 406 aa18.4■□□□□ 0.54
RPUSD4-207ENST00000532800 RBAKQ9NYW8 714 aaPredicted RBP18.4■□□□□ 0.54
RPUSD4-207ENST00000532800 GMEB2Q9UKD1 530 aa18.4■□□□□ 0.54
RPUSD4-207ENST00000532800 AGAP1Q9UPQ3 857 aa18.4■□□□□ 0.54
RPUSD4-207ENST00000532800 CCL26Q9Y258 94 aa18.4■□□□□ 0.54
RPUSD4-207ENST00000532800 PCDHB5Q9Y5E4 795 aa18.4■□□□□ 0.54
RPUSD4-207ENST00000532800 F11P03951 625 aa18.39■□□□□ 0.53
RPUSD4-207ENST00000532800 ACAT1P24752 427 aaKnown RBP18.39■□□□□ 0.53
RPUSD4-207ENST00000532800 PNPLA4P41247 253 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms