RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 KCNMB3Q9NPA1 279 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 PCSK1NQ9UHG2 260 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 HEY1Q9Y5J3 304 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 SETD1AO15047 1707 aaKnown RBP12.22□□□□□ -0.45
CSRP1-215ENST00000532313 C3orf70A6NLC5 250 aaPredicted RBP12.22□□□□□ -0.45
CSRP1-215ENST00000532313 POLR3GO15318 223 aaPredicted RBP12.22□□□□□ -0.45
CSRP1-215ENST00000532313 MLH1P40692 756 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 PEX6Q13608 980 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 GPATCH11Q8N954 259 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 SPPL2BQ8TCT7 592 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 RFFLQ8WZ73 363 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 FAF2Q96CS3 445 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 CINPQ9BW66 212 aaPredicted RBP12.22□□□□□ -0.45
CSRP1-215ENST00000532313 PTPN22Q9Y2R2 807 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 GLI3P10071 1580 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 CCDC188H7C350 402 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 NDUFA10O95299 355 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 SGPL1O95470 568 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 CHKAP35790 457 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 METTL3Q86U44 580 aaKnown RBP12.22□□□□□ -0.45
CSRP1-215ENST00000532313 TRIM42Q8IWZ5 723 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.22□□□□□ -0.45
CSRP1-215ENST00000532313 TMEM176AQ96HP8 235 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 SENP8Q96LD8 212 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 UNC93B1Q9H1C4 597 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 RASSF10A6NK89 507 aa12.21□□□□□ -0.45
CSRP1-215ENST00000532313 LRRC53A6NM62 1247 aa12.21□□□□□ -0.45
CSRP1-215ENST00000532313 MFAP3LO75121 409 aa12.21□□□□□ -0.45
CSRP1-215ENST00000532313 ROR1Q01973 937 aa12.21□□□□□ -0.45
CSRP1-215ENST00000532313 TTC31Q49AM3 519 aaPredicted RBP12.21□□□□□ -0.45
CSRP1-215ENST00000532313 TAF1BQ53T94 588 aaPredicted RBP12.21□□□□□ -0.45
CSRP1-215ENST00000532313 NUGGCQ68CJ6 796 aa12.21□□□□□ -0.45
CSRP1-215ENST00000532313 PDE12Q6L8Q7 609 aaKnown RBP12.21□□□□□ -0.45
CSRP1-215ENST00000532313 TIGD7Q6NT04 549 aaPredicted RBP12.21□□□□□ -0.45
CSRP1-215ENST00000532313 DDIT4Q9NX09 232 aa12.21□□□□□ -0.45
CSRP1-215ENST00000532313 TRPM3Q9HCF6 1732 aaPredicted RBP12.21□□□□□ -0.45
CSRP1-215ENST00000532313 COL2A1P02458 1487 aaPredicted RBP12.21□□□□□ -0.45
CSRP1-215ENST00000532313 CCDC151A5D8V7 595 aa12.21□□□□□ -0.45
CSRP1-215ENST00000532313 NDUFS2O75306 463 aa12.21□□□□□ -0.45
CSRP1-215ENST00000532313 CTDNEP1O95476 244 aa12.21□□□□□ -0.45
CSRP1-215ENST00000532313 MDM2Q00987 491 aaPredicted RBP12.21□□□□□ -0.45
CSRP1-215ENST00000532313 CAV1Q03135 178 aa12.21□□□□□ -0.45
CSRP1-215ENST00000532313 AP1B1Q10567 949 aa12.21□□□□□ -0.45
CSRP1-215ENST00000532313 CENPUQ71F23 418 aa12.21□□□□□ -0.45
CSRP1-215ENST00000532313 CEP68Q76N32 757 aa12.21□□□□□ -0.45
CSRP1-215ENST00000532313 RCOR2Q8IZ40 523 aa12.21□□□□□ -0.45
CSRP1-215ENST00000532313 ARNTL2Q8WYA1 636 aa12.21□□□□□ -0.45
CSRP1-215ENST00000532313 SHDQ96IW2 340 aa12.21□□□□□ -0.45
CSRP1-215ENST00000532313 CIPCQ9C0C6 399 aa12.21□□□□□ -0.45
CSRP1-215ENST00000532313 ZNF214Q9UL59 606 aaPredicted RBP12.21□□□□□ -0.45
CSRP1-215ENST00000532313 PADI3Q9ULW8 664 aa12.21□□□□□ -0.45
CSRP1-215ENST00000532313 EFCAB8A8MWE9 144 aa12.21□□□□□ -0.46
CSRP1-215ENST00000532313 E5RI56 91 aa12.21□□□□□ -0.46
CSRP1-215ENST00000532313 BAIAP3O94812 1187 aa12.21□□□□□ -0.46
CSRP1-215ENST00000532313 GJA9P57773 515 aa12.21□□□□□ -0.46
CSRP1-215ENST00000532313 GPM6BQ13491 265 aa12.21□□□□□ -0.46
CSRP1-215ENST00000532313 PSMD6Q15008 389 aa12.21□□□□□ -0.46
CSRP1-215ENST00000532313 FRA10AC1Q70Z53 315 aa12.21□□□□□ -0.46
CSRP1-215ENST00000532313 HDXQ7Z353 690 aa12.21□□□□□ -0.46
CSRP1-215ENST00000532313 MRRFQ96E11 262 aaKnown RBP12.21□□□□□ -0.46
CSRP1-215ENST00000532313 SLC30A1Q9Y6M5 507 aa12.21□□□□□ -0.46
CSRP1-215ENST00000532313 CYTH3O43739 400 aa12.21□□□□□ -0.46
CSRP1-215ENST00000532313 STK4Q13043 487 aa12.21□□□□□ -0.46
CSRP1-215ENST00000532313 ACOT1Q86TX2 421 aa12.21□□□□□ -0.46
CSRP1-215ENST00000532313 CPA6Q8N4T0 437 aa12.21□□□□□ -0.46
CSRP1-215ENST00000532313 SMG7Q92540 1137 aaKnown RBP12.21□□□□□ -0.46
CSRP1-215ENST00000532313 TMEM161AQ9NX61 479 aa12.21□□□□□ -0.46
CSRP1-215ENST00000532313 VPS9D1Q9Y2B5 631 aa12.21□□□□□ -0.46
CSRP1-215ENST00000532313 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.2□□□□□ -0.46
CSRP1-215ENST00000532313 CHEK2O96017 543 aa12.2□□□□□ -0.46
CSRP1-215ENST00000532313 RHOCP08134 193 aa12.2□□□□□ -0.46
CSRP1-215ENST00000532313 KCNA3P22001 575 aa12.2□□□□□ -0.46
CSRP1-215ENST00000532313 PLPP4Q5VZY2 271 aa12.2□□□□□ -0.46
CSRP1-215ENST00000532313 ABHD15Q6UXT9 468 aa12.2□□□□□ -0.46
CSRP1-215ENST00000532313 PHLDB2Q86SQ0 1253 aa12.2□□□□□ -0.46
CSRP1-215ENST00000532313 AMIGO3Q86WK7 504 aa12.2□□□□□ -0.46
CSRP1-215ENST00000532313 PALB2Q86YC2 1186 aa12.2□□□□□ -0.46
CSRP1-215ENST00000532313 C18orf25Q96B23 403 aaPredicted RBP12.2□□□□□ -0.46
CSRP1-215ENST00000532313 UTP6Q9NYH9 597 aaKnown RBP12.2□□□□□ -0.46
CSRP1-215ENST00000532313 LIMA1Q9UHB6 759 aaKnown RBP12.2□□□□□ -0.46
CSRP1-215ENST00000532313 IGKV6D-41A0A0C4DH26 115 aa12.2□□□□□ -0.46
CSRP1-215ENST00000532313 ZMYND10O75800 440 aa12.2□□□□□ -0.46
CSRP1-215ENST00000532313 TMCC1O94876 653 aa12.2□□□□□ -0.46
CSRP1-215ENST00000532313 PAEPP09466 180 aa12.2□□□□□ -0.46
CSRP1-215ENST00000532313 TAC1P20366 129 aa12.2□□□□□ -0.46
CSRP1-215ENST00000532313 MLLT1Q03111 559 aaPredicted RBP12.2□□□□□ -0.46
CSRP1-215ENST00000532313 MIB1Q86YT6 1006 aa12.2□□□□□ -0.46
CSRP1-215ENST00000532313 SUSD6Q92537 303 aa12.2□□□□□ -0.46
CSRP1-215ENST00000532313 PPP1R16AQ96I34 528 aa12.2□□□□□ -0.46
CSRP1-215ENST00000532313 KBTBD4Q9NVX7 518 aa12.2□□□□□ -0.46
CSRP1-215ENST00000532313 TBC1D14Q9P2M4 693 aa12.2□□□□□ -0.46
CSRP1-215ENST00000532313 NFU1Q9UMS0 254 aa12.2□□□□□ -0.46
CSRP1-215ENST00000532313 SOWAHBA6NEL2 793 aa12.2□□□□□ -0.46
CSRP1-215ENST00000532313 LZTS3O60299 673 aaPredicted RBP12.2□□□□□ -0.46
CSRP1-215ENST00000532313 EFEMP1Q12805 493 aa12.2□□□□□ -0.46
CSRP1-215ENST00000532313 TMEM119Q4V9L6 283 aa12.2□□□□□ -0.46
CSRP1-215ENST00000532313 SYTL3Q4VX76 610 aa12.2□□□□□ -0.46
CSRP1-215ENST00000532313 SLC39A12Q504Y0 691 aa12.2□□□□□ -0.46
CSRP1-215ENST00000532313 TRIM48Q8IWZ4 208 aa12.2□□□□□ -0.46
CSRP1-215ENST00000532313 HOMEZQ8IX15 550 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms