RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 SCINQ9Y6U3 715 aa16.1■□□□□ 0.17
SRPRA-206ENST00000532259 SMIM35A0A1B0GVV1 85 aa16.1■□□□□ 0.17
SRPRA-206ENST00000532259 CILPO75339 1184 aa16.1■□□□□ 0.17
SRPRA-206ENST00000532259 IGHA2P01877 340 aa16.1■□□□□ 0.17
SRPRA-206ENST00000532259 IBSPP21815 317 aaPredicted RBP16.1■□□□□ 0.17
SRPRA-206ENST00000532259 PTGIRP43119 386 aa16.1■□□□□ 0.17
SRPRA-206ENST00000532259 SNX17Q15036 470 aa16.1■□□□□ 0.17
SRPRA-206ENST00000532259 EMC1Q8N766 993 aa16.1■□□□□ 0.17
SRPRA-206ENST00000532259 CPXM1Q96SM3 734 aa16.1■□□□□ 0.17
SRPRA-206ENST00000532259 PLAAQ9Y263 795 aa16.1■□□□□ 0.17
SRPRA-206ENST00000532259 ATP8A1Q9Y2Q0 1164 aa16.1■□□□□ 0.17
SRPRA-206ENST00000532259 PASKQ96RG2 1323 aa16.1■□□□□ 0.17
SRPRA-206ENST00000532259 M0QYV0 167 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 KRT10P13645 584 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 CHRNA3P32297 505 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 HSD17B3P37058 310 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 COILP38432 576 aaPredicted RBP16.09■□□□□ 0.17
SRPRA-206ENST00000532259 VPS41P49754 854 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 CPT1AP50416 773 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 NDST1P52848 882 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 PURAQ00577 322 aaKnown RBP16.09■□□□□ 0.17
SRPRA-206ENST00000532259 UAP1Q16222 522 aaPredicted RBP16.09■□□□□ 0.17
SRPRA-206ENST00000532259 SLC27A1Q6PCB7 646 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 CXCL17Q6UXB2 119 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 TRIB2Q92519 343 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 VCPIP1Q96JH7 1222 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 RAB17Q9H0T7 212 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.09■□□□□ 0.17
SRPRA-206ENST00000532259 NME7Q9Y5B8 376 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 SNX9Q9Y5X1 595 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 TMEM191CA6NGB0 347 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 RECQL4O94761 1208 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 CYP3A5P20815 502 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 SLC1A1P43005 524 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 PSMC4P43686 418 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 RPL21P46778 160 aaKnown RBP16.09■□□□□ 0.17
SRPRA-206ENST00000532259 PTPN11Q06124 597 aaPredicted RBP16.09■□□□□ 0.17
SRPRA-206ENST00000532259 DHX9Q08211 1270 aaKnown RBP16.09■□□□□ 0.17
SRPRA-206ENST00000532259 ADCY2Q08462 1091 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 NNTQ13423 1086 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 TTMPQ5BVD1 217 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 DUPD1Q68J44 220 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 JOSD2Q8TAC2 188 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 FBXO25Q8TCJ0 367 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 TMEM176AQ96HP8 235 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 GOLGA2P5Q9HBQ8 144 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 PCDHGC3Q9UN70 934 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 C2CD2Q9Y426 696 aa16.09■□□□□ 0.17
SRPRA-206ENST00000532259 GOLGA6CA6NDK9 693 aa16.08■□□□□ 0.17
SRPRA-206ENST00000532259 CALB1P05937 261 aa16.08■□□□□ 0.17
SRPRA-206ENST00000532259 GOLGA6DP0CG33 693 aa16.08■□□□□ 0.17
SRPRA-206ENST00000532259 ATF7P17544 494 aaPredicted RBP16.08■□□□□ 0.17
SRPRA-206ENST00000532259 IGFBP6P24592 240 aaPredicted RBP16.08■□□□□ 0.17
SRPRA-206ENST00000532259 RFC1P35251 1148 aaPredicted RBP16.08■□□□□ 0.17
SRPRA-206ENST00000532259 PSMC1P62191 440 aaKnown RBP16.08■□□□□ 0.17
SRPRA-206ENST00000532259 SMTNL2Q2TAL5 461 aa16.08■□□□□ 0.17
SRPRA-206ENST00000532259 GNASQ5JWF2 1037 aa16.08■□□□□ 0.17
SRPRA-206ENST00000532259 TTC19Q6DKK2 380 aaPredicted RBP16.08■□□□□ 0.17
SRPRA-206ENST00000532259 CYP4F22Q6NT55 531 aa16.08■□□□□ 0.17
SRPRA-206ENST00000532259 PRUNE1Q86TP1 453 aa16.08■□□□□ 0.17
SRPRA-206ENST00000532259 RHOT1Q8IXI2 618 aa16.08■□□□□ 0.17
SRPRA-206ENST00000532259 IQCKQ8N0W5 287 aa16.08■□□□□ 0.17
SRPRA-206ENST00000532259 WNT8BQ93098 351 aa16.08■□□□□ 0.17
SRPRA-206ENST00000532259 SNX27Q96L92 541 aa16.08■□□□□ 0.17
SRPRA-206ENST00000532259 CCDC114Q96M63 670 aa16.08■□□□□ 0.17
SRPRA-206ENST00000532259 MRPL45Q9BRJ2 306 aaKnown RBP16.08■□□□□ 0.17
SRPRA-206ENST00000532259 GOLGA6AQ9NYA3 693 aa16.08■□□□□ 0.17
SRPRA-206ENST00000532259 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.08■□□□□ 0.17
SRPRA-206ENST00000532259 MICAL2O94851 1124 aa16.08■□□□□ 0.16
SRPRA-206ENST00000532259 LSM8O95777 96 aaKnown RBP16.08■□□□□ 0.16
SRPRA-206ENST00000532259 YWHAEP62258 255 aaKnown RBP16.08■□□□□ 0.16
SRPRA-206ENST00000532259 RBP5P82980 135 aa16.08■□□□□ 0.16
SRPRA-206ENST00000532259 DHX34Q14147 1143 aaKnown RBP16.08■□□□□ 0.16
SRPRA-206ENST00000532259 PPP1R7Q15435 360 aa16.08■□□□□ 0.16
SRPRA-206ENST00000532259 NOTUMQ6P988 496 aa16.08■□□□□ 0.16
SRPRA-206ENST00000532259 FMO2Q99518 471 aa16.08■□□□□ 0.16
SRPRA-206ENST00000532259 OSBPL7Q9BZF2 842 aa16.08■□□□□ 0.16
SRPRA-206ENST00000532259 FAM114A2Q9NRY5 505 aa16.08■□□□□ 0.16
SRPRA-206ENST00000532259 TLL2Q9Y6L7 1015 aa16.08■□□□□ 0.16
SRPRA-206ENST00000532259 ERBB2P04626 1255 aa16.07■□□□□ 0.16
SRPRA-206ENST00000532259 CDH5P33151 784 aaPredicted RBP16.07■□□□□ 0.16
SRPRA-206ENST00000532259 HSPA9P38646 679 aaKnown RBP16.07■□□□□ 0.16
SRPRA-206ENST00000532259 KCNT1Q5JUK3 1230 aa16.07■□□□□ 0.16
SRPRA-206ENST00000532259 PPP1R15BQ5SWA1 713 aa16.07■□□□□ 0.16
SRPRA-206ENST00000532259 CEP85LQ5SZL2 805 aa16.07■□□□□ 0.16
SRPRA-206ENST00000532259 UBAP2Q5T6F2 1119 aaKnown RBP16.07■□□□□ 0.16
SRPRA-206ENST00000532259 ALS2CLQ60I27 953 aa16.07■□□□□ 0.16
SRPRA-206ENST00000532259 C7orf31Q8N865 590 aa16.07■□□□□ 0.16
SRPRA-206ENST00000532259 ARRDC4Q8NCT1 418 aa16.07■□□□□ 0.16
SRPRA-206ENST00000532259 UHMK1Q8TAS1 419 aaKnown RBP16.07■□□□□ 0.16
SRPRA-206ENST00000532259 SEC14L1Q92503 715 aa16.07■□□□□ 0.16
SRPRA-206ENST00000532259 HAUS1Q96CS2 278 aa16.07■□□□□ 0.16
SRPRA-206ENST00000532259 PLVAPQ9BX97 442 aa16.07■□□□□ 0.16
SRPRA-206ENST00000532259 LRRC4CQ9HCJ2 640 aa16.07■□□□□ 0.16
SRPRA-206ENST00000532259 FAM49BQ9NUQ9 324 aa16.07■□□□□ 0.16
SRPRA-206ENST00000532259 CACNG4Q9UBN1 327 aa16.07■□□□□ 0.16
SRPRA-206ENST00000532259 PARP2Q9UGN5 583 aa16.07■□□□□ 0.16
SRPRA-206ENST00000532259 IP6K2Q9UHH9 426 aa16.07■□□□□ 0.16
SRPRA-206ENST00000532259 RASAL2Q9UJF2 1139 aa16.07■□□□□ 0.16
SRPRA-206ENST00000532259 ITGA11Q9UKX5 1188 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms