RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 PLXNB3Q9ULL4 1909 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 SPAARA0A1B0GVQ0 90 aa9.75□□□□□ -0.85
USF1-210ENST00000531842 BCLAF3A2AJT9 711 aaKnown RBP9.75□□□□□ -0.85
USF1-210ENST00000531842 LACTBL1A8MY62 500 aa9.75□□□□□ -0.85
USF1-210ENST00000531842 OR52Z1P0C646 297 aa9.75□□□□□ -0.85
USF1-210ENST00000531842 MCM2P49736 904 aa9.75□□□□□ -0.85
USF1-210ENST00000531842 SEC13P55735 322 aa9.75□□□□□ -0.85
USF1-210ENST00000531842 IRX4P78413 519 aa9.75□□□□□ -0.85
USF1-210ENST00000531842 PSMD2Q13200 908 aa9.75□□□□□ -0.85
USF1-210ENST00000531842 GPR17Q13304 367 aa9.75□□□□□ -0.85
USF1-210ENST00000531842 RUNX3Q13761 415 aa9.75□□□□□ -0.85
USF1-210ENST00000531842 TXNDC8Q6A555 127 aa9.75□□□□□ -0.85
USF1-210ENST00000531842 SCARA3Q6AZY7 606 aa9.75□□□□□ -0.85
USF1-210ENST00000531842 OVOS1Q6IE37 1185 aa9.75□□□□□ -0.85
USF1-210ENST00000531842 ARMCX6Q7L4S7 300 aa9.75□□□□□ -0.85
USF1-210ENST00000531842 HAUS6Q7Z4H7 955 aa9.75□□□□□ -0.85
USF1-210ENST00000531842 TTC30AQ86WT1 665 aa9.75□□□□□ -0.85
USF1-210ENST00000531842 ZCCHC14Q8WYQ9 949 aaKnown RBP9.75□□□□□ -0.85
USF1-210ENST00000531842 KIFAP3Q92845 792 aa9.75□□□□□ -0.85
USF1-210ENST00000531842 E2F7Q96AV8 911 aa9.75□□□□□ -0.85
USF1-210ENST00000531842 MSANTD3Q96H12 275 aa9.75□□□□□ -0.85
USF1-210ENST00000531842 LOXL4Q96JB6 756 aa9.75□□□□□ -0.85
USF1-210ENST00000531842 ZC3H10Q96K80 434 aaKnown RBP9.75□□□□□ -0.85
USF1-210ENST00000531842 FAM84AQ96KN4 292 aa9.75□□□□□ -0.85
USF1-210ENST00000531842 SENP8Q96LD8 212 aa9.75□□□□□ -0.85
USF1-210ENST00000531842 PLIN2Q99541 437 aa9.75□□□□□ -0.85
USF1-210ENST00000531842 FAM83CQ9BQN1 747 aa9.75□□□□□ -0.85
USF1-210ENST00000531842 GPR88Q9GZN0 384 aa9.75□□□□□ -0.85
USF1-210ENST00000531842 TASP1Q9H6P5 420 aa9.75□□□□□ -0.85
USF1-210ENST00000531842 ZDHHC4Q9NPG8 344 aa9.75□□□□□ -0.85
USF1-210ENST00000531842 LHX6Q9UPM6 363 aa9.75□□□□□ -0.85
USF1-210ENST00000531842 ATXN2Q99700 1313 aaKnown RBP9.75□□□□□ -0.85
USF1-210ENST00000531842 TTC26A0AVF1 554 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 TAF4O00268 1085 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 FOXD2O60548 495 aaPredicted RBP9.74□□□□□ -0.85
USF1-210ENST00000531842 HNRNPLP14866 589 aaKnown RBP eCLIP9.74□□□□□ -0.85
USF1-210ENST00000531842 MATR3P43243 847 aaKnown RBP eCLIP9.74□□□□□ -0.85
USF1-210ENST00000531842 AARSP49588 968 aaKnown RBP eCLIP9.74□□□□□ -0.85
USF1-210ENST00000531842 DGKEP52429 567 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 FAM193AP78312 1265 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 GRSF1Q12849 480 aaKnown RBP eCLIP9.74□□□□□ -0.85
USF1-210ENST00000531842 DMC1Q14565 340 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 NOLC1Q14978 699 aaKnown RBP eCLIP9.74□□□□□ -0.85
USF1-210ENST00000531842 ANKRD1Q15327 319 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 ZRSR1Q15695 479 aaKnown RBP9.74□□□□□ -0.85
USF1-210ENST00000531842 ZBTB6Q15916 424 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 IL17AQ16552 155 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 MGAT5BQ3V5L5 792 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 C8orf34Q49A92 452 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 ARHGAP15Q53QZ3 475 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 RINT1Q6NUQ1 792 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 C19orf48Q6RUI8 117 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 LRSAM1Q6UWE0 723 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 USP37Q86T82 979 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 CMTM8Q8IZV2 173 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 SYNPOQ8N3V7 929 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 C4orf32Q8N8J7 132 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 OR2I1PQ8NGU4 316 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 SNX29Q8TEQ0 813 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 RLN3Q8WXF3 142 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 GTF3C6Q969F1 213 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 FAM212AQ96EL1 285 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 SLC22A12Q96S37 553 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 CYP2S1Q96SQ9 504 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 IKZF4Q9H2S9 585 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 TMEM134Q9H6X4 195 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 TMLHEQ9NVH6 421 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 WNT6Q9Y6F9 365 aa9.74□□□□□ -0.85
USF1-210ENST00000531842 TISP43B9A030 160 aa9.73□□□□□ -0.85
USF1-210ENST00000531842 TRDMT1O14717 391 aaKnown RBP9.73□□□□□ -0.85
USF1-210ENST00000531842 SCAMP3O14828 347 aaKnown RBP9.73□□□□□ -0.85
USF1-210ENST00000531842 NFICP08651 508 aa9.73□□□□□ -0.85
USF1-210ENST00000531842 LRPAP1P30533 357 aa9.73□□□□□ -0.85
USF1-210ENST00000531842 GJA4P35212 333 aa9.73□□□□□ -0.85
USF1-210ENST00000531842 MAPK8P45983 427 aa9.73□□□□□ -0.85
USF1-210ENST00000531842 DHPSP49366 369 aaPredicted RBP9.73□□□□□ -0.85
USF1-210ENST00000531842 MESP2Q0VG99 397 aa9.73□□□□□ -0.85
USF1-210ENST00000531842 DMP1Q13316 513 aaPredicted RBP9.73□□□□□ -0.85
USF1-210ENST00000531842 TRIM29Q14134 588 aa9.73□□□□□ -0.85
USF1-210ENST00000531842 ENOX2Q16206 610 aaKnown RBP9.73□□□□□ -0.85
USF1-210ENST00000531842 ZC2HC1CQ53FD0 456 aaPredicted RBP9.73□□□□□ -0.85
USF1-210ENST00000531842 JADE1Q6IE81 842 aa9.73□□□□□ -0.85
USF1-210ENST00000531842 C1orf186Q6ZWK4 172 aa9.73□□□□□ -0.85
USF1-210ENST00000531842 APBB1IPQ7Z5R6 666 aaPredicted RBP9.73□□□□□ -0.85
USF1-210ENST00000531842 CCDC33Q8N5R6 958 aa9.73□□□□□ -0.85
USF1-210ENST00000531842 DEFB119Q8N690 84 aa9.73□□□□□ -0.85
USF1-210ENST00000531842 ERMNQ8TAM6 284 aa9.73□□□□□ -0.85
USF1-210ENST00000531842 ERLEC1Q96DZ1 483 aa9.73□□□□□ -0.85
USF1-210ENST00000531842 KIF2CQ99661 725 aa9.73□□□□□ -0.85
USF1-210ENST00000531842 MMTAG2Q9BU76 263 aaKnown RBP9.73□□□□□ -0.85
USF1-210ENST00000531842 ABI2Q9NYB9 513 aaPredicted RBP9.73□□□□□ -0.85
USF1-210ENST00000531842 LRWD1Q9UFC0 647 aa9.73□□□□□ -0.85
USF1-210ENST00000531842 CIZ1Q9ULV3 898 aaPredicted RBP9.73□□□□□ -0.85
USF1-210ENST00000531842 MAGED2Q9UNF1 606 aaPredicted RBP9.73□□□□□ -0.85
USF1-210ENST00000531842 PCDHGA5Q9Y5G8 931 aa9.73□□□□□ -0.85
USF1-210ENST00000531842 APC2O95996 2303 aa9.72□□□□□ -0.85
USF1-210ENST00000531842 PTPRBP23467 1997 aa9.72□□□□□ -0.85
USF1-210ENST00000531842 CCDC163A0A0D9SF12 145 aa9.72□□□□□ -0.85
USF1-210ENST00000531842 OR6C75A6NL08 312 aa9.72□□□□□ -0.85
USF1-210ENST00000531842 HCRTO43612 131 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms