RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 MYBPHLA2RUH7 354 aa14.36□□□□□ -0.11
AMBRA1-210ENST00000531542 STX6O43752 255 aa14.36□□□□□ -0.11
AMBRA1-210ENST00000531542 EXTL3O43909 919 aa14.36□□□□□ -0.11
AMBRA1-210ENST00000531542 PPP6R2O75170 966 aa14.36□□□□□ -0.11
AMBRA1-210ENST00000531542 PAPSS2O95340 614 aaPredicted RBP14.36□□□□□ -0.11
AMBRA1-210ENST00000531542 GCNT3O95395 438 aa14.36□□□□□ -0.11
AMBRA1-210ENST00000531542 CHRNB1P11230 501 aa14.36□□□□□ -0.11
AMBRA1-210ENST00000531542 CCR3P51677 355 aa14.36□□□□□ -0.11
AMBRA1-210ENST00000531542 CASP5P51878 434 aa14.36□□□□□ -0.11
AMBRA1-210ENST00000531542 NFE2Q16621 373 aaPredicted RBP14.36□□□□□ -0.11
AMBRA1-210ENST00000531542 MGAT5BQ3V5L5 792 aa14.36□□□□□ -0.11
AMBRA1-210ENST00000531542 CNNM4Q6P4Q7 775 aa14.36□□□□□ -0.11
AMBRA1-210ENST00000531542 RALGPS2Q86X27 583 aaPredicted RBP14.36□□□□□ -0.11
AMBRA1-210ENST00000531542 C1orf127Q8N9H9 656 aa14.36□□□□□ -0.11
AMBRA1-210ENST00000531542 LINC00301Q8NCQ3 95 aa14.36□□□□□ -0.11
AMBRA1-210ENST00000531542 CSGALNACT1Q8TDX6 532 aa14.36□□□□□ -0.11
AMBRA1-210ENST00000531542 TNMDQ9H2S6 317 aa14.36□□□□□ -0.11
AMBRA1-210ENST00000531542 LMAN1LQ9HAT1 526 aa14.36□□□□□ -0.11
AMBRA1-210ENST00000531542 PANK4Q9NVE7 773 aa14.36□□□□□ -0.11
AMBRA1-210ENST00000531542 KBTBD4Q9NVX7 518 aa14.36□□□□□ -0.11
AMBRA1-210ENST00000531542 PCDHB5Q9Y5E4 795 aa14.36□□□□□ -0.11
AMBRA1-210ENST00000531542 MIA3Q5JRA6 1907 aa14.36□□□□□ -0.11
AMBRA1-210ENST00000531542 FRYLO94915 3013 aa14.36□□□□□ -0.11
AMBRA1-210ENST00000531542 COL4A2P08572 1712 aa14.35□□□□□ -0.11
AMBRA1-210ENST00000531542 A0A087X0B3 334 aa14.35□□□□□ -0.11
AMBRA1-210ENST00000531542 K7ELQ4 463 aaPredicted RBP14.35□□□□□ -0.11
AMBRA1-210ENST00000531542 DPYSL4O14531 572 aa14.35□□□□□ -0.11
AMBRA1-210ENST00000531542 SOAT2O75908 522 aa14.35□□□□□ -0.11
AMBRA1-210ENST00000531542 IDEP14735 1019 aa14.35□□□□□ -0.11
AMBRA1-210ENST00000531542 DDX6P26196 483 aaKnown RBP eCLIP14.35□□□□□ -0.11
AMBRA1-210ENST00000531542 TSPY1Q01534 308 aa14.35□□□□□ -0.11
AMBRA1-210ENST00000531542 CEBPZQ03701 1054 aaKnown RBP14.35□□□□□ -0.11
AMBRA1-210ENST00000531542 DGKKQ5KSL6 1271 aa14.35□□□□□ -0.11
AMBRA1-210ENST00000531542 STXBP5Q5T5C0 1151 aa14.35□□□□□ -0.11
AMBRA1-210ENST00000531542 GPR158Q5T848 1215 aa14.35□□□□□ -0.11
AMBRA1-210ENST00000531542 STXBP4Q6ZWJ1 553 aa14.35□□□□□ -0.11
AMBRA1-210ENST00000531542 DPH6Q7L8W6 267 aa14.35□□□□□ -0.11
AMBRA1-210ENST00000531542 CCDC65Q8IXS2 484 aa14.35□□□□□ -0.11
AMBRA1-210ENST00000531542 SYCP3Q8IZU3 236 aa14.35□□□□□ -0.11
AMBRA1-210ENST00000531542 SYNPOQ8N3V7 929 aa14.35□□□□□ -0.11
AMBRA1-210ENST00000531542 SPEM1Q8N4L4 309 aa14.35□□□□□ -0.11
AMBRA1-210ENST00000531542 LRRC3BQ96PB8 259 aa14.35□□□□□ -0.11
AMBRA1-210ENST00000531542 GCNAQ96QF7 691 aa14.35□□□□□ -0.11
AMBRA1-210ENST00000531542 SEPT5Q99719 369 aaPredicted RBP14.35□□□□□ -0.11
AMBRA1-210ENST00000531542 BACH2Q9BYV9 841 aa14.35□□□□□ -0.11
AMBRA1-210ENST00000531542 RBAKQ9NYW8 714 aaPredicted RBP14.35□□□□□ -0.11
AMBRA1-210ENST00000531542 NDRG2Q9UN36 371 aaKnown RBP14.35□□□□□ -0.11
AMBRA1-210ENST00000531542 DCHS1Q96JQ0 3298 aa14.35□□□□□ -0.11
AMBRA1-210ENST00000531542 GABRDO14764 452 aa14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 ITGB3P05106 788 aa14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 HMGA1P17096 107 aaKnown RBP14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 CCNE1P24864 410 aa14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 HOXA6P31267 233 aa14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 WNT7BP56706 349 aa14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 RBP5P82980 135 aa14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 TFAMQ00059 246 aaKnown RBP14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 LRRC32Q14392 662 aa14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 SURF1Q15526 300 aa14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 E2F4Q16254 413 aa14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 LIMS2Q7Z4I7 341 aa14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 TMEM150AQ86TG1 271 aa14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 CMTM8Q8IZV2 173 aa14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 GPD1LQ8N335 351 aa14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 PDCL2Q8N4E4 241 aa14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 TOP6BLQ8N6T0 577 aa14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 CELF5Q8N6W0 485 aaKnown RBP14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 FAM200AQ8TCP9 573 aa14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 BPIFB1Q8TDL5 484 aa14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 SAAL1Q96ER3 474 aa14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 TRMT2BQ96GJ1 504 aaKnown RBP14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 MYRFLQ96LU7 910 aa14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 PKMYT1Q99640 499 aa14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 LPIN3Q9BQK8 851 aa14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 CBWD1Q9BRT8 395 aa14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 SLC46A2Q9BY10 475 aa14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 KIAA1586Q9HCI6 787 aa14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 THG1LQ9NWX6 298 aaKnown RBP14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 TBC1D7Q9P0N9 293 aa14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 AGAP1Q9UPQ3 857 aa14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 PATJQ8NI35 1801 aa14.34□□□□□ -0.11
AMBRA1-210ENST00000531542 SPECC1L-ADORA2AF8WAN1 911 aa14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 SPTLC2O15270 562 aa14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 EIF3DO15371 548 aaKnown RBP eCLIP14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 HUS1O60921 280 aa14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 YEATS4O95619 227 aa14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 F11P03951 625 aa14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 CSH1P0DML2 217 aa14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 CSH2P0DML3 217 aa14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 POLR2BP30876 1174 aaKnown RBP14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 CTHP32929 405 aa14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 CXCL12P48061 93 aa14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 LHX1P48742 406 aa14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 KPNA1P52294 538 aaPredicted RBP14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 NLRP12P59046 1061 aa14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 SNRPFP62306 86 aaKnown RBP14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 AMPD3Q01432 767 aa14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 TAF12Q16514 161 aa14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 CFAP221Q4G0U5 840 aa14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 CSGALNACT2Q8N6G5 542 aa14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 ZSWIM2Q8NEG5 633 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms