RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 DNASE1L2Q92874 299 aa13.5□□□□□ -0.25
C11orf54-210ENST00000531516 TCEAL4Q96EI5 215 aa13.5□□□□□ -0.25
C11orf54-210ENST00000531516 ASB16Q96NS5 453 aa13.5□□□□□ -0.25
C11orf54-210ENST00000531516 ABCB6Q9NP58 842 aa13.5□□□□□ -0.25
C11orf54-210ENST00000531516 HOOK1Q9UJC3 728 aaKnown RBP13.5□□□□□ -0.25
C11orf54-210ENST00000531516 FRMD4BQ9Y2L6 1034 aa13.5□□□□□ -0.25
C11orf54-210ENST00000531516 DENND4AQ7Z401 1863 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 H0Y858 1186 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 MAN2B1O00754 1011 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 ZNF263O14978 683 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 TGFB1I1O43294 461 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 ACTN4O43707 911 aaKnown RBP13.49□□□□□ -0.25
C11orf54-210ENST00000531516 CALUO43852 315 aaPredicted RBP13.49□□□□□ -0.25
C11orf54-210ENST00000531516 CSH1P0DML2 217 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 CSH2P0DML3 217 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 HAPLN1P10915 354 aaPredicted RBP13.49□□□□□ -0.25
C11orf54-210ENST00000531516 PSMC3P17980 439 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 GABRR2P28476 465 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 CASP1P29466 404 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 CYP24A1Q07973 514 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 EHHADHQ08426 723 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 BIRC3Q13489 604 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 SNW1Q13573 536 aaKnown RBP13.49□□□□□ -0.25
C11orf54-210ENST00000531516 TEAD2Q15562 447 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 KMT5BQ4FZB7 885 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 FAM78AQ5JUQ0 283 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 CWF19L1Q69YN2 538 aaKnown RBP13.49□□□□□ -0.25
C11orf54-210ENST00000531516 TANGO2Q6ICL3 276 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 C1orf228Q6PIY5 440 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 ZNF852Q6ZMS4 543 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 TRAPPC11Q7Z392 1133 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 CCDC105Q8IYK2 499 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 GRAMD1CQ8IYS0 662 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 DTWD2Q8NBA8 298 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 ZSWIM2Q8NEG5 633 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 ST13P5Q8NFI4 369 aaPredicted RBP13.49□□□□□ -0.25
C11orf54-210ENST00000531516 CSGALNACT1Q8TDX6 532 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 SYAP1Q96A49 352 aaPredicted RBP13.49□□□□□ -0.25
C11orf54-210ENST00000531516 BORCS6Q96GS4 357 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 TMEM209Q96SK2 561 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 CGRRF1Q99675 332 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 RPP25Q9BUL9 199 aaKnown RBP13.49□□□□□ -0.25
C11orf54-210ENST00000531516 BCO2Q9BYV7 579 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 DNAI2Q9GZS0 605 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 SNX25Q9H3E2 840 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 THG1LQ9NWX6 298 aaKnown RBP13.49□□□□□ -0.25
C11orf54-210ENST00000531516 EHD2Q9NZN4 543 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 UXTQ9UBK9 157 aaPredicted RBP13.49□□□□□ -0.25
C11orf54-210ENST00000531516 L1RE1Q9UN81 338 aa13.49□□□□□ -0.25
C11orf54-210ENST00000531516 KANSL1LA0AUZ9 987 aa13.48□□□□□ -0.25
C11orf54-210ENST00000531516 KRBA1A5PL33 1030 aa13.48□□□□□ -0.25
C11orf54-210ENST00000531516 PDXKO00764 312 aa13.48□□□□□ -0.25
C11orf54-210ENST00000531516 RPN1P04843 607 aaKnown RBP13.48□□□□□ -0.25
C11orf54-210ENST00000531516 FAM163BP0C2L3 166 aa13.48□□□□□ -0.25
C11orf54-210ENST00000531516 P4HA1P13674 534 aa13.48□□□□□ -0.25
C11orf54-210ENST00000531516 NPR3P17342 541 aa13.48□□□□□ -0.25
C11orf54-210ENST00000531516 RPL13P26373 211 aaKnown RBP13.48□□□□□ -0.25
C11orf54-210ENST00000531516 HOXD11P31277 338 aaPredicted RBP13.48□□□□□ -0.25
C11orf54-210ENST00000531516 ATICP31939 592 aa13.48□□□□□ -0.25
C11orf54-210ENST00000531516 MAGEA9P43362 315 aa13.48□□□□□ -0.25
C11orf54-210ENST00000531516 STARD6P59095 220 aa13.48□□□□□ -0.25
C11orf54-210ENST00000531516 UBXN2BQ14CS0 331 aa13.48□□□□□ -0.25
C11orf54-210ENST00000531516 INTS6LQ5JSJ4 861 aaKnown RBP13.48□□□□□ -0.25
C11orf54-210ENST00000531516 GPR158Q5T848 1215 aa13.48□□□□□ -0.25
C11orf54-210ENST00000531516 LMBRD2Q68DH5 695 aaPredicted RBP13.48□□□□□ -0.25
C11orf54-210ENST00000531516 ALYREFQ86V81 257 aaKnown RBP13.48□□□□□ -0.25
C11orf54-210ENST00000531516 MRPS31Q92665 395 aaKnown RBP13.48□□□□□ -0.25
C11orf54-210ENST00000531516 FUBP3Q96I24 572 aaKnown RBP eCLIP13.48□□□□□ -0.25
C11orf54-210ENST00000531516 OSBPL6Q9BZF3 934 aa13.48□□□□□ -0.25
C11orf54-210ENST00000531516 TRPV4Q9HBA0 871 aa13.48□□□□□ -0.25
C11orf54-210ENST00000531516 RMND1Q9NWS8 449 aa13.48□□□□□ -0.25
C11orf54-210ENST00000531516 CDH9Q9ULB4 789 aa13.48□□□□□ -0.25
C11orf54-210ENST00000531516 HPSEQ9Y251 543 aa13.48□□□□□ -0.25
C11orf54-210ENST00000531516 MTCL1Q9Y4B5 1905 aaKnown RBP13.48□□□□□ -0.25
C11orf54-210ENST00000531516 VWA8A3KMH1 1905 aa13.47□□□□□ -0.25
C11orf54-210ENST00000531516 GJA1P17302 382 aa13.47□□□□□ -0.25
C11orf54-210ENST00000531516 DDX6P26196 483 aaKnown RBP eCLIP13.47□□□□□ -0.25
C11orf54-210ENST00000531516 ANXA13P27216 316 aa13.47□□□□□ -0.25
C11orf54-210ENST00000531516 GDI1P31150 447 aa13.47□□□□□ -0.25
C11orf54-210ENST00000531516 HOXD13P35453 343 aa13.47□□□□□ -0.25
C11orf54-210ENST00000531516 AVPR1AP37288 418 aa13.47□□□□□ -0.25
C11orf54-210ENST00000531516 CCR2P41597 374 aa13.47□□□□□ -0.25
C11orf54-210ENST00000531516 MRE11P49959 708 aa13.47□□□□□ -0.25
C11orf54-210ENST00000531516 NDUFA8P51970 172 aa13.47□□□□□ -0.25
C11orf54-210ENST00000531516 WNT7BP56706 349 aa13.47□□□□□ -0.25
C11orf54-210ENST00000531516 TCF15Q12870 199 aa13.47□□□□□ -0.25
C11orf54-210ENST00000531516 STK4Q13043 487 aa13.47□□□□□ -0.25
C11orf54-210ENST00000531516 KRBA2Q6ZNG9 492 aa13.47□□□□□ -0.25
C11orf54-210ENST00000531516 MFSD6LQ8IWD5 586 aa13.47□□□□□ -0.25
C11orf54-210ENST00000531516 OR5B17Q8NGF7 314 aa13.47□□□□□ -0.25
C11orf54-210ENST00000531516 SHKBP1Q8TBC3 707 aa13.47□□□□□ -0.25
C11orf54-210ENST00000531516 GIPC2Q8TF65 315 aa13.47□□□□□ -0.25
C11orf54-210ENST00000531516 MSANTD3Q96H12 275 aa13.47□□□□□ -0.25
C11orf54-210ENST00000531516 SYT15Q9BQS2 421 aa13.47□□□□□ -0.25
C11orf54-210ENST00000531516 PI4K2AQ9BTU6 479 aa13.47□□□□□ -0.25
C11orf54-210ENST00000531516 GTPBP4Q9BZE4 634 aaKnown RBP13.47□□□□□ -0.25
C11orf54-210ENST00000531516 DNAJC25Q9H1X3 360 aa13.47□□□□□ -0.25
C11orf54-210ENST00000531516 CRISPLD1Q9H336 500 aa13.47□□□□□ -0.25
C11orf54-210ENST00000531516 TASP1Q9H6P5 420 aa13.47□□□□□ -0.25
C11orf54-210ENST00000531516 MAGEC2Q9UBF1 373 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms