RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 K7ESF4 209 aa19.91■□□□□ 0.78
SSSCA1-206ENST00000531405 SDHBP21912 280 aa19.91■□□□□ 0.78
SSSCA1-206ENST00000531405 TUFMP49411 452 aaKnown RBP19.91■□□□□ 0.78
SSSCA1-206ENST00000531405 TAF6P49848 677 aa19.91■□□□□ 0.78
SSSCA1-206ENST00000531405 SIM2Q14190 667 aaPredicted RBP19.91■□□□□ 0.78
SSSCA1-206ENST00000531405 VEPH1Q14D04 833 aa19.91■□□□□ 0.78
SSSCA1-206ENST00000531405 SF3A1Q15459 793 aaKnown RBP19.91■□□□□ 0.78
SSSCA1-206ENST00000531405 WSCD1Q658N2 575 aa19.91■□□□□ 0.78
SSSCA1-206ENST00000531405 C1orf228Q6PIY5 440 aa19.91■□□□□ 0.78
SSSCA1-206ENST00000531405 USP49Q70CQ1 688 aa19.91■□□□□ 0.78
SSSCA1-206ENST00000531405 METTL23Q86XA0 190 aa19.91■□□□□ 0.78
SSSCA1-206ENST00000531405 EFCAB13Q8IY85 973 aa19.91■□□□□ 0.78
SSSCA1-206ENST00000531405 BPIFB1Q8TDL5 484 aa19.91■□□□□ 0.78
SSSCA1-206ENST00000531405 ASB7Q9H672 318 aa19.91■□□□□ 0.78
SSSCA1-206ENST00000531405 TASP1Q9H6P5 420 aa19.91■□□□□ 0.78
SSSCA1-206ENST00000531405 DSEQ9UL01 958 aa19.91■□□□□ 0.78
SSSCA1-206ENST00000531405 C2CD2Q9Y426 696 aa19.91■□□□□ 0.78
SSSCA1-206ENST00000531405 HELZP42694 1942 aaKnown RBP19.91■□□□□ 0.78
SSSCA1-206ENST00000531405 CHD8Q9HCK8 2581 aa19.9■□□□□ 0.78
SSSCA1-206ENST00000531405 KMT2BQ9UMN6 2715 aaPredicted RBP19.9■□□□□ 0.78
SSSCA1-206ENST00000531405 TULP1O00294 542 aaPredicted RBP19.9■□□□□ 0.78
SSSCA1-206ENST00000531405 PAX3P23760 479 aa19.9■□□□□ 0.78
SSSCA1-206ENST00000531405 DGKKQ5KSL6 1271 aa19.9■□□□□ 0.78
SSSCA1-206ENST00000531405 CRELD2Q6UXH1 353 aaPredicted RBP19.9■□□□□ 0.78
SSSCA1-206ENST00000531405 DYMQ7RTS9 669 aa19.9■□□□□ 0.78
SSSCA1-206ENST00000531405 SFR1Q86XK3 245 aa19.9■□□□□ 0.78
SSSCA1-206ENST00000531405 STKLD1Q8NE28 680 aa19.9■□□□□ 0.78
SSSCA1-206ENST00000531405 EPSTI1Q96J88 318 aa19.9■□□□□ 0.78
SSSCA1-206ENST00000531405 GCNAQ96QF7 691 aa19.9■□□□□ 0.78
SSSCA1-206ENST00000531405 SLC46A2Q9BY10 475 aa19.9■□□□□ 0.78
SSSCA1-206ENST00000531405 OBP2AQ9NY56 170 aa19.9■□□□□ 0.78
SSSCA1-206ENST00000531405 ABI2Q9NYB9 513 aaPredicted RBP19.9■□□□□ 0.78
SSSCA1-206ENST00000531405 STYXL1Q9Y6J8 313 aa19.9■□□□□ 0.78
SSSCA1-206ENST00000531405 CDC25CP30307 473 aa19.89■□□□□ 0.77
SSSCA1-206ENST00000531405 CCINQ13939 588 aa19.89■□□□□ 0.77
SSSCA1-206ENST00000531405 TAF12Q16514 161 aa19.89■□□□□ 0.77
SSSCA1-206ENST00000531405 SLFN12LQ6IEE8 588 aa19.89■□□□□ 0.77
SSSCA1-206ENST00000531405 THEM5Q8N1Q8 247 aa19.89■□□□□ 0.77
SSSCA1-206ENST00000531405 POMGNT1Q8WZA1 660 aa19.89■□□□□ 0.77
SSSCA1-206ENST00000531405 ST6GALNAC4Q9H4F1 302 aa19.89■□□□□ 0.77
SSSCA1-206ENST00000531405 TMLHEQ9NVH6 421 aa19.89■□□□□ 0.77
SSSCA1-206ENST00000531405 CNOT1A5YKK6 2376 aaKnown RBP19.88■□□□□ 0.77
SSSCA1-206ENST00000531405 PAPSS2O95340 614 aaPredicted RBP19.88■□□□□ 0.77
SSSCA1-206ENST00000531405 BMP15O95972 392 aa19.88■□□□□ 0.77
SSSCA1-206ENST00000531405 RETP07949 1114 aa19.88■□□□□ 0.77
SSSCA1-206ENST00000531405 HAPLN1P10915 354 aaPredicted RBP19.88■□□□□ 0.77
SSSCA1-206ENST00000531405 WEE1P30291 646 aa19.88■□□□□ 0.77
SSSCA1-206ENST00000531405 ADSSP30520 456 aa19.88■□□□□ 0.77
SSSCA1-206ENST00000531405 ABCD1P33897 745 aa19.88■□□□□ 0.77
SSSCA1-206ENST00000531405 DDIT3P35638 169 aa19.88■□□□□ 0.77
SSSCA1-206ENST00000531405 GPR15P49685 360 aa19.88■□□□□ 0.77
SSSCA1-206ENST00000531405 MCM2P49736 904 aa19.88■□□□□ 0.77
SSSCA1-206ENST00000531405 WNT7BP56706 349 aa19.88■□□□□ 0.77
SSSCA1-206ENST00000531405 KCNA1Q09470 495 aa19.88■□□□□ 0.77
SSSCA1-206ENST00000531405 ZNF720Q7Z2F6 126 aa19.88■□□□□ 0.77
SSSCA1-206ENST00000531405 BRAPQ7Z569 592 aa19.88■□□□□ 0.77
SSSCA1-206ENST00000531405 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.88■□□□□ 0.77
SSSCA1-206ENST00000531405 TMEM150AQ86TG1 271 aa19.88■□□□□ 0.77
SSSCA1-206ENST00000531405 LONP2Q86WA8 852 aa19.88■□□□□ 0.77
SSSCA1-206ENST00000531405 KRI1Q8N9T8 703 aaKnown RBP19.88■□□□□ 0.77
SSSCA1-206ENST00000531405 ZSWIM2Q8NEG5 633 aa19.88■□□□□ 0.77
SSSCA1-206ENST00000531405 SPPL2BQ8TCT7 592 aa19.88■□□□□ 0.77
SSSCA1-206ENST00000531405 RTKNQ9BST9 563 aa19.88■□□□□ 0.77
SSSCA1-206ENST00000531405 CCSER1Q9C0I3 900 aa19.88■□□□□ 0.77
SSSCA1-206ENST00000531405 CCL26Q9Y258 94 aa19.88■□□□□ 0.77
SSSCA1-206ENST00000531405 PTPRDP23468 1912 aa19.88■□□□□ 0.77
SSSCA1-206ENST00000531405 MAP1BP46821 2468 aaKnown RBP19.87■□□□□ 0.77
SSSCA1-206ENST00000531405 KPNA7A9QM74 516 aa19.87■□□□□ 0.77
SSSCA1-206ENST00000531405 PLCB2Q00722 1185 aa19.87■□□□□ 0.77
SSSCA1-206ENST00000531405 ITPRIPL2Q3MIP1 535 aa19.87■□□□□ 0.77
SSSCA1-206ENST00000531405 SV2CQ496J9 727 aa19.87■□□□□ 0.77
SSSCA1-206ENST00000531405 SCARA3Q6AZY7 606 aa19.87■□□□□ 0.77
SSSCA1-206ENST00000531405 PKN3Q6P5Z2 889 aa19.87■□□□□ 0.77
SSSCA1-206ENST00000531405 CMTM8Q8IZV2 173 aa19.87■□□□□ 0.77
SSSCA1-206ENST00000531405 MAB21L3Q8N8X9 362 aa19.87■□□□□ 0.77
SSSCA1-206ENST00000531405 C2orf15Q8WU43 125 aaKnown RBP19.87■□□□□ 0.77
SSSCA1-206ENST00000531405 FAM84AQ96KN4 292 aa19.87■□□□□ 0.77
SSSCA1-206ENST00000531405 CNTNAP3BQ96NU0 1288 aa19.87■□□□□ 0.77
SSSCA1-206ENST00000531405 CNTNAP3Q9BZ76 1288 aa19.87■□□□□ 0.77
SSSCA1-206ENST00000531405 GKN1Q9NS71 199 aa19.87■□□□□ 0.77
SSSCA1-206ENST00000531405 SEMA4GQ9NTN9 838 aa19.87■□□□□ 0.77
SSSCA1-206ENST00000531405 TBC1D7Q9P0N9 293 aa19.87■□□□□ 0.77
SSSCA1-206ENST00000531405 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.87■□□□□ 0.77
SSSCA1-206ENST00000531405 CLIC4Q9Y696 253 aa19.87■□□□□ 0.77
SSSCA1-206ENST00000531405 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.86■□□□□ 0.77
SSSCA1-206ENST00000531405 EXTL3O43909 919 aa19.86■□□□□ 0.77
SSSCA1-206ENST00000531405 PPP1R37O75864 691 aa19.86■□□□□ 0.77
SSSCA1-206ENST00000531405 HMGA1P17096 107 aaKnown RBP19.86■□□□□ 0.77
SSSCA1-206ENST00000531405 NLRP12P59046 1061 aa19.86■□□□□ 0.77
SSSCA1-206ENST00000531405 SDHAF4Q5VUM1 108 aa19.86■□□□□ 0.77
SSSCA1-206ENST00000531405 TRIM68Q6AZZ1 485 aa19.86■□□□□ 0.77
SSSCA1-206ENST00000531405 SAAL1Q96ER3 474 aa19.86■□□□□ 0.77
SSSCA1-206ENST00000531405 FAM213AQ9BRX8 229 aa19.86■□□□□ 0.77
SSSCA1-206ENST00000531405 PI4K2AQ9BTU6 479 aa19.86■□□□□ 0.77
SSSCA1-206ENST00000531405 MRPL44Q9H9J2 332 aaKnown RBP19.86■□□□□ 0.77
SSSCA1-206ENST00000531405 HPS4Q9NQG7 708 aa19.86■□□□□ 0.77
SSSCA1-206ENST00000531405 THG1LQ9NWX6 298 aaKnown RBP19.86■□□□□ 0.77
SSSCA1-206ENST00000531405 PCDHB5Q9Y5E4 795 aa19.86■□□□□ 0.77
SSSCA1-206ENST00000531405 VPS37CA5D8V6 355 aaPredicted RBP19.85■□□□□ 0.77
SSSCA1-206ENST00000531405 OTOL1A6NHN0 477 aaPredicted RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms