RNA–Protein interactions for RNA: ENST00000531297.1

SOX6-214, Transcript of SRY-box 6, humanhuman

TSL 3

Gene SOX6, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-214ENST00000531297 CASC1Q6TDU7 716 aa4.88□□□□□ -1.63
SOX6-214ENST00000531297 CHD1LQ86WJ1 897 aa4.88□□□□□ -1.63
SOX6-214ENST00000531297 SYNPOQ8N3V7 929 aa4.88□□□□□ -1.63
SOX6-214ENST00000531297 LILRA3Q8N6C8 439 aaPredicted RBP4.88□□□□□ -1.63
SOX6-214ENST00000531297 CPEB3Q8NE35 698 aaKnown RBP4.88□□□□□ -1.63
SOX6-214ENST00000531297 PIK3C3Q8NEB9 887 aa4.88□□□□□ -1.63
SOX6-214ENST00000531297 GRAPLQ8TC17 118 aaPredicted RBP4.88□□□□□ -1.63
SOX6-214ENST00000531297 GAB3Q8WWW8 586 aa4.88□□□□□ -1.63
SOX6-214ENST00000531297 LINC00476Q8WZB0 136 aa4.88□□□□□ -1.63
SOX6-214ENST00000531297 ZNF622Q969S3 477 aaKnown RBP eCLIP4.88□□□□□ -1.637e-6■■■■□ 22.7
SOX6-214ENST00000531297 SOX7Q9BT81 388 aa4.88□□□□□ -1.63
SOX6-214ENST00000531297 CPEB1Q9BZB8 566 aaKnown RBP4.88□□□□□ -1.63
SOX6-214ENST00000531297 SIL1Q9H173 461 aa4.88□□□□□ -1.63
SOX6-214ENST00000531297 ZNF768Q9H5H4 540 aaKnown RBP4.88□□□□□ -1.63
SOX6-214ENST00000531297 GREM2Q9H772 168 aa4.88□□□□□ -1.63
SOX6-214ENST00000531297 OXSMQ9NWU1 459 aa4.88□□□□□ -1.63
SOX6-214ENST00000531297 USP18Q9UMW8 372 aa4.88□□□□□ -1.63
SOX6-214ENST00000531297 CD2APQ9Y5K6 639 aa4.88□□□□□ -1.63
SOX6-214ENST00000531297 SCN7AQ01118 1682 aa4.87□□□□□ -1.63
SOX6-214ENST00000531297 ANKRD36CQ5JPF3 1778 aa4.87□□□□□ -1.63
SOX6-214ENST00000531297 BCORQ6W2J9 1755 aa4.87□□□□□ -1.63
SOX6-214ENST00000531297 INO80B-WBP1J3KQ70 363 aa4.87□□□□□ -1.63
SOX6-214ENST00000531297 LPXNO60711 386 aa4.87□□□□□ -1.63
SOX6-214ENST00000531297 SEC24DO94855 1032 aaPredicted RBP4.87□□□□□ -1.63
SOX6-214ENST00000531297 FOSP01100 380 aaPredicted RBP4.87□□□□□ -1.63
SOX6-214ENST00000531297 GASTP01350 101 aa4.87□□□□□ -1.63
SOX6-214ENST00000531297 DDR1Q08345 913 aa4.87□□□□□ -1.63
SOX6-214ENST00000531297 UBE4AQ14139 1066 aa4.87□□□□□ -1.63
SOX6-214ENST00000531297 PUM3Q15397 648 aaKnown RBP4.87□□□□□ -1.63
SOX6-214ENST00000531297 CAVIN4Q5BKX8 364 aa4.87□□□□□ -1.63
SOX6-214ENST00000531297 GPR158Q5T848 1215 aa4.87□□□□□ -1.63
SOX6-214ENST00000531297 SMIM5Q71RC9 77 aa4.87□□□□□ -1.63
SOX6-214ENST00000531297 C2CD5Q86YS7 1000 aa4.87□□□□□ -1.63
SOX6-214ENST00000531297 OR10H5Q8NGA6 315 aa4.87□□□□□ -1.63
SOX6-214ENST00000531297 LPIN2Q92539 896 aa4.87□□□□□ -1.63
SOX6-214ENST00000531297 NEUROD6Q96NK8 337 aa4.87□□□□□ -1.63
SOX6-214ENST00000531297 EYA3Q99504 573 aa4.87□□□□□ -1.63
SOX6-214ENST00000531297 ORAI3Q9BRQ5 295 aa4.87□□□□□ -1.63
SOX6-214ENST00000531297 DUSP26Q9BV47 211 aa4.87□□□□□ -1.63
SOX6-214ENST00000531297 LSM14BQ9BX40 385 aaKnown RBP4.87□□□□□ -1.63
SOX6-214ENST00000531297 INO80BQ9C086 356 aaPredicted RBP4.87□□□□□ -1.63
SOX6-214ENST00000531297 IGSF5Q9NSI5 407 aa4.87□□□□□ -1.63
SOX6-214ENST00000531297 SYBUQ9NX95 663 aa4.87□□□□□ -1.63
SOX6-214ENST00000531297 TLK1Q9UKI8 766 aa4.87□□□□□ -1.63
SOX6-214ENST00000531297 EXOC6BQ9Y2D4 811 aa4.87□□□□□ -1.63
SOX6-214ENST00000531297 CHST2Q9Y4C5 530 aa4.87□□□□□ -1.63
SOX6-214ENST00000531297 FPGT-TNNI3KV9GXZ4 949 aa4.87□□□□□ -1.63
SOX6-214ENST00000531297 QSER1Q2KHR3 1735 aa4.86□□□□□ -1.63
SOX6-214ENST00000531297 EP400Q96L91 3159 aa4.86□□□□□ -1.63
SOX6-214ENST00000531297 AK9Q5TCS8 1911 aa4.86□□□□□ -1.63
SOX6-214ENST00000531297 IGSF3O75054 1194 aa4.86□□□□□ -1.63
SOX6-214ENST00000531297 FRAT2O75474 233 aaPredicted RBP4.86□□□□□ -1.63
SOX6-214ENST00000531297 DNAJC8O75937 253 aaPredicted RBP4.86□□□□□ -1.63
SOX6-214ENST00000531297 PDE8BO95263 885 aa4.86□□□□□ -1.63
SOX6-214ENST00000531297 ESRRBO95718 433 aa4.86□□□□□ -1.63
SOX6-214ENST00000531297 UQCRFS1P1P0C7P4 283 aa4.86□□□□□ -1.63
SOX6-214ENST00000531297 SRGNP10124 158 aa4.86□□□□□ -1.63
SOX6-214ENST00000531297 GSPT1P15170 499 aaKnown RBP4.86□□□□□ -1.63
SOX6-214ENST00000531297 ZSCAN20P17040 1043 aaPredicted RBP4.86□□□□□ -1.63
SOX6-214ENST00000531297 RFX5P48382 616 aaPredicted RBP4.86□□□□□ -1.63
SOX6-214ENST00000531297 RNASE9P60153 205 aaKnown RBP4.86□□□□□ -1.63
SOX6-214ENST00000531297 ATP2B3Q16720 1220 aa4.86□□□□□ -1.63
SOX6-214ENST00000531297 CRY2Q49AN0 593 aa4.86□□□□□ -1.63
SOX6-214ENST00000531297 BMP2KLQ5H9B9 411 aa4.86□□□□□ -1.63
SOX6-214ENST00000531297 TTC39AQ5SRH9 613 aa4.86□□□□□ -1.63
SOX6-214ENST00000531297 UNQ6494/PRO21346Q6UXR6 183 aa4.86□□□□□ -1.63
SOX6-214ENST00000531297 GPRIN1Q7Z2K8 1008 aa4.86□□□□□ -1.63
SOX6-214ENST00000531297 AACSQ86V21 672 aa4.86□□□□□ -1.63
SOX6-214ENST00000531297 TICAM2Q86XR7 235 aa4.86□□□□□ -1.63
SOX6-214ENST00000531297 BOLLQ8N9W6 283 aaKnown RBP4.86□□□□□ -1.63
SOX6-214ENST00000531297 TFAP2CQ92754 450 aa4.86□□□□□ -1.63
SOX6-214ENST00000531297 KAZALD1Q96I82 304 aa4.86□□□□□ -1.63
SOX6-214ENST00000531297 MSRAQ9UJ68 235 aa4.86□□□□□ -1.63
SOX6-214ENST00000531297 PA2G4Q9UQ80 394 aaKnown RBP4.86□□□□□ -1.63
SOX6-214ENST00000531297 RIPOR2Q9Y4F9 1068 aa4.86□□□□□ -1.63
SOX6-214ENST00000531297 AOX1Q06278 1338 aa4.86□□□□□ -1.63
SOX6-214ENST00000531297 TTC41PQ6P2S7 1318 aa4.86□□□□□ -1.63
SOX6-214ENST00000531297 HIP1O00291 1037 aa4.85□□□□□ -1.63
SOX6-214ENST00000531297 PRAMEF4O60810 478 aa4.85□□□□□ -1.63
SOX6-214ENST00000531297 RFPL3O75679 317 aa4.85□□□□□ -1.63
SOX6-214ENST00000531297 LTA4HP09960 611 aaKnown RBP4.85□□□□□ -1.63
SOX6-214ENST00000531297 MX1P20591 662 aa4.85□□□□□ -1.63
SOX6-214ENST00000531297 LSP1P33241 339 aa4.85□□□□□ -1.63
SOX6-214ENST00000531297 ANP32AP39687 249 aaKnown RBP4.85□□□□□ -1.63
SOX6-214ENST00000531297 KPNA1P52294 538 aaPredicted RBP4.85□□□□□ -1.63
SOX6-214ENST00000531297 FAM189BP81408 668 aa4.85□□□□□ -1.63
SOX6-214ENST00000531297 CHRNDQ07001 517 aa4.85□□□□□ -1.63
SOX6-214ENST00000531297 MGAT5Q09328 741 aa4.85□□□□□ -1.63
SOX6-214ENST00000531297 TFCP2Q12800 502 aa4.85□□□□□ -1.63
SOX6-214ENST00000531297 ZNF460Q14592 562 aa4.85□□□□□ -1.63
SOX6-214ENST00000531297 TTF1Q15361 905 aaPredicted RBP4.85□□□□□ -1.63
SOX6-214ENST00000531297 CCDC93Q567U6 631 aa4.85□□□□□ -1.63
SOX6-214ENST00000531297 DALRD3Q5D0E6 543 aaKnown RBP4.85□□□□□ -1.63
SOX6-214ENST00000531297 COLEC12Q5KU26 742 aa4.85□□□□□ -1.63
SOX6-214ENST00000531297 ZSCAN25Q6NSZ9 544 aa4.85□□□□□ -1.63
SOX6-214ENST00000531297 TMED8Q6PL24 325 aaPredicted RBP4.85□□□□□ -1.63
SOX6-214ENST00000531297 ZNF804AQ7Z570 1209 aa4.85□□□□□ -1.63
SOX6-214ENST00000531297 C11orf74Q86VG3 221 aa4.85□□□□□ -1.63
SOX6-214ENST00000531297 CNTROBQ8N137 903 aa4.85□□□□□ -1.63
SOX6-214ENST00000531297 ZGPATQ8N5A5 531 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms