RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 ZNF560Q96MR9 790 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 GLT1D1Q96MS3 346 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 RHOXF2Q9BQY4 288 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 MRPL45Q9BRJ2 306 aaKnown RBP11.59□□□□□ -0.55
SRPRA-205ENST00000531104 NT5C1AQ9BXI3 368 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 SEZ6LQ9BYH1 1024 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 TRIM7Q9C029 511 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 TRMT13Q9NUP7 481 aaKnown RBP11.59□□□□□ -0.55
SRPRA-205ENST00000531104 PARVAQ9NVD7 372 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 ZNF446Q9NWS9 450 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 LCMT1Q9UIC8 334 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 ANAPC7Q9UJX3 599 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 PADI3Q9ULW8 664 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 PTCH2Q9Y6C5 1203 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 SCN1AP35498 2009 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 A0A0U1RQG5 324 aaPredicted RBP11.58□□□□□ -0.56
SRPRA-205ENST00000531104 TMEM191CA6NGB0 347 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 MEIS3P2A8K0S8 358 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 SPTLC1O15269 473 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 INPPL1O15357 1258 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 MICAL2O94851 1124 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 ZRANB2O95218 330 aaKnown RBP eCLIP11.58□□□□□ -0.56
SRPRA-205ENST00000531104 PFKMP08237 780 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 ITGA4P13612 1032 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 CD19P15391 556 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 CD52P31358 61 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 GPD2P43304 727 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 TAF6P49848 677 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 CDK7P50613 346 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 RAB27AP51159 221 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 DNA2P51530 1060 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 TAP1Q03518 808 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 NFX1Q12986 1120 aaKnown RBP11.58□□□□□ -0.56
SRPRA-205ENST00000531104 CLUL1Q15846 466 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 PTPROQ16827 1216 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 PTPN20Q4JDL3 420 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 C2CD6Q53TS8 623 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 SGO2Q562F6 1265 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 ZNF618Q5T7W0 954 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 ARHGAP17Q68EM7 881 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 AGMOQ6ZNB7 445 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 DPH6Q7L8W6 267 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 ERICH1Q86X53 443 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 HACE1Q8IYU2 909 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 CRYBG2Q8N1P7 616 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 UBL4BQ8N7F7 174 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 KBTBD7Q8WVZ9 684 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.58□□□□□ -0.56
SRPRA-205ENST00000531104 RNF19AQ9NV58 838 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 ARGLU1Q9NWB6 273 aaPredicted RBP11.58□□□□□ -0.56
SRPRA-205ENST00000531104 MIOSQ9NXC5 875 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 CEP83Q9Y592 693 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 SNX9Q9Y5X1 595 aa11.58□□□□□ -0.56
SRPRA-205ENST00000531104 A0A0U1RQF3 1178 aa11.57□□□□□ -0.56
SRPRA-205ENST00000531104 TMEM110-MUSTN1A8MSY1 372 aa11.57□□□□□ -0.56
SRPRA-205ENST00000531104 KPNA7A9QM74 516 aa11.57□□□□□ -0.56
SRPRA-205ENST00000531104 CCDC188H7C350 402 aa11.57□□□□□ -0.56
SRPRA-205ENST00000531104 MYO1FO00160 1098 aa11.57□□□□□ -0.56
SRPRA-205ENST00000531104 ARVCFO00192 962 aa11.57□□□□□ -0.56
SRPRA-205ENST00000531104 GHRP10912 638 aa11.57□□□□□ -0.56
SRPRA-205ENST00000531104 FGFR1P11362 822 aa11.57□□□□□ -0.56
SRPRA-205ENST00000531104 CKBP12277 381 aa11.57□□□□□ -0.56
SRPRA-205ENST00000531104 WARSP23381 471 aaKnown RBP11.57□□□□□ -0.56
SRPRA-205ENST00000531104 MARCKSL1P49006 195 aa11.57□□□□□ -0.56
SRPRA-205ENST00000531104 LILRA4P59901 499 aa11.57□□□□□ -0.56
SRPRA-205ENST00000531104 VSNL1P62760 191 aa11.57□□□□□ -0.56
SRPRA-205ENST00000531104 PAK2Q13177 524 aa11.57□□□□□ -0.56
SRPRA-205ENST00000531104 ORC1Q13415 861 aa11.57□□□□□ -0.56
SRPRA-205ENST00000531104 ZNF268Q14587 947 aaPredicted RBP11.57□□□□□ -0.56
SRPRA-205ENST00000531104 SV2CQ496J9 727 aa11.57□□□□□ -0.56
SRPRA-205ENST00000531104 CC2D1AQ6P1N0 951 aaPredicted RBP11.57□□□□□ -0.56
SRPRA-205ENST00000531104 ZNF598Q86UK7 904 aaKnown RBP11.57□□□□□ -0.56
SRPRA-205ENST00000531104 TOP6BLQ8N6T0 577 aa11.57□□□□□ -0.56
SRPRA-205ENST00000531104 NIPA2Q8N8Q9 360 aa11.57□□□□□ -0.56
SRPRA-205ENST00000531104 C3orf20Q8ND61 904 aa11.57□□□□□ -0.56
SRPRA-205ENST00000531104 RNPC3Q96LT9 517 aaKnown RBP11.57□□□□□ -0.56
SRPRA-205ENST00000531104 HEXIM2Q96MH2 286 aaKnown RBP11.57□□□□□ -0.56
SRPRA-205ENST00000531104 LRRC1Q9BTT6 524 aa11.57□□□□□ -0.56
SRPRA-205ENST00000531104 SLC38A7Q9NVC3 462 aa11.57□□□□□ -0.56
SRPRA-205ENST00000531104 WDR35Q9P2L0 1181 aa11.57□□□□□ -0.56
SRPRA-205ENST00000531104 STRIP2Q9ULQ0 834 aa11.57□□□□□ -0.56
SRPRA-205ENST00000531104 SPDYE4A6NLX3 237 aa11.56□□□□□ -0.56
SRPRA-205ENST00000531104 SIGLEC16A6NMB1 481 aa11.56□□□□□ -0.56
SRPRA-205ENST00000531104 ATP8B1O43520 1251 aa11.56□□□□□ -0.56
SRPRA-205ENST00000531104 SETSIPP0DME0 302 aa11.56□□□□□ -0.56
SRPRA-205ENST00000531104 SKIP12755 728 aa11.56□□□□□ -0.56
SRPRA-205ENST00000531104 MCM3P25205 808 aa11.56□□□□□ -0.56
SRPRA-205ENST00000531104 TNFRSF8P28908 595 aa11.56□□□□□ -0.56
SRPRA-205ENST00000531104 RPL34P49207 117 aaKnown RBP11.56□□□□□ -0.56
SRPRA-205ENST00000531104 ZNF252P-AS1Q0IIN9 211 aa11.56□□□□□ -0.56
SRPRA-205ENST00000531104 MBTPS1Q14703 1052 aa11.56□□□□□ -0.56
SRPRA-205ENST00000531104 DNAJC24Q6P3W2 148 aa11.56□□□□□ -0.56
SRPRA-205ENST00000531104 FAM43BQ6ZT52 329 aaPredicted RBP11.56□□□□□ -0.56
SRPRA-205ENST00000531104 PHLDB2Q86SQ0 1253 aa11.56□□□□□ -0.56
SRPRA-205ENST00000531104 XYLT1Q86Y38 959 aa11.56□□□□□ -0.56
SRPRA-205ENST00000531104 C18orf8Q96DM3 657 aa11.56□□□□□ -0.56
SRPRA-205ENST00000531104 MCRS1Q96EZ8 462 aa11.56□□□□□ -0.56
SRPRA-205ENST00000531104 DDX27Q96GQ7 796 aaKnown RBP11.56□□□□□ -0.56
SRPRA-205ENST00000531104 ZFP42Q96MM3 310 aa11.56□□□□□ -0.56
SRPRA-205ENST00000531104 CPXM1Q96SM3 734 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms