RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 CSGALNACT1Q8TDX6 532 aa17.01■□□□□ 0.31
CPSF1-205ENST00000531042 CACTINQ8WUQ7 758 aaKnown RBP17.01■□□□□ 0.31
CPSF1-205ENST00000531042 NELL1Q92832 810 aa17.01■□□□□ 0.31
CPSF1-205ENST00000531042 LRRC3BQ96PB8 259 aa17.01■□□□□ 0.31
CPSF1-205ENST00000531042 CBWD1Q9BRT8 395 aa17.01■□□□□ 0.31
CPSF1-205ENST00000531042 CHRDQ9H2X0 955 aa17.01■□□□□ 0.31
CPSF1-205ENST00000531042 TMEM206Q9H813 350 aa17.01■□□□□ 0.31
CPSF1-205ENST00000531042 IL21Q9HBE4 155 aa17.01■□□□□ 0.31
CPSF1-205ENST00000531042 PRMT8Q9NR22 394 aaPredicted RBP17.01■□□□□ 0.31
CPSF1-205ENST00000531042 AGAP1Q9UPQ3 857 aa17.01■□□□□ 0.31
CPSF1-205ENST00000531042 PCDHGA2Q9Y5H1 932 aa17.01■□□□□ 0.31
CPSF1-205ENST00000531042 EP300Q09472 2414 aaPredicted RBP17.01■□□□□ 0.31
CPSF1-205ENST00000531042 F5P12259 2224 aa17.01■□□□□ 0.31
CPSF1-205ENST00000531042 DCHS1Q96JQ0 3298 aa17.01■□□□□ 0.31
CPSF1-205ENST00000531042 SPTLC2O15270 562 aa17■□□□□ 0.31
CPSF1-205ENST00000531042 WEE1P30291 646 aa17■□□□□ 0.31
CPSF1-205ENST00000531042 TSSK4Q6SA08 328 aa17■□□□□ 0.31
CPSF1-205ENST00000531042 MAMSTRQ6ZN01 415 aa17■□□□□ 0.31
CPSF1-205ENST00000531042 PDCL2Q8N4E4 241 aa17■□□□□ 0.31
CPSF1-205ENST00000531042 ZBTB44Q8NCP5 570 aa17■□□□□ 0.31
CPSF1-205ENST00000531042 CXorf38Q8TB03 319 aa17■□□□□ 0.31
CPSF1-205ENST00000531042 GIPC2Q8TF65 315 aa17■□□□□ 0.31
CPSF1-205ENST00000531042 PCIF1Q9H4Z3 704 aa17■□□□□ 0.31
CPSF1-205ENST00000531042 TASP1Q9H6P5 420 aa17■□□□□ 0.31
CPSF1-205ENST00000531042 LMAN1LQ9HAT1 526 aa17■□□□□ 0.31
CPSF1-205ENST00000531042 ZSCAN32Q9NX65 697 aa17■□□□□ 0.31
CPSF1-205ENST00000531042 OBP2AQ9NY56 170 aa17■□□□□ 0.31
CPSF1-205ENST00000531042 ABI2Q9NYB9 513 aaPredicted RBP17■□□□□ 0.31
CPSF1-205ENST00000531042 DPYSL4O14531 572 aa16.99■□□□□ 0.31
CPSF1-205ENST00000531042 PPP6R2O75170 966 aa16.99■□□□□ 0.31
CPSF1-205ENST00000531042 CCNE1P24864 410 aa16.99■□□□□ 0.31
CPSF1-205ENST00000531042 CDC25CP30307 473 aa16.99■□□□□ 0.31
CPSF1-205ENST00000531042 CYP4F8P98187 520 aa16.99■□□□□ 0.31
CPSF1-205ENST00000531042 E2F4Q16254 413 aa16.99■□□□□ 0.31
CPSF1-205ENST00000531042 TAF12Q16514 161 aa16.99■□□□□ 0.31
CPSF1-205ENST00000531042 ARHGAP29Q52LW3 1261 aa16.99■□□□□ 0.31
CPSF1-205ENST00000531042 SCARA3Q6AZY7 606 aa16.99■□□□□ 0.31
CPSF1-205ENST00000531042 GPD1LQ8N335 351 aa16.99■□□□□ 0.31
CPSF1-205ENST00000531042 CSGALNACT2Q8N6G5 542 aa16.99■□□□□ 0.31
CPSF1-205ENST00000531042 LRRC52Q8N7C0 313 aa16.99■□□□□ 0.31
CPSF1-205ENST00000531042 NOC3LQ8WTT2 800 aaKnown RBP16.99■□□□□ 0.31
CPSF1-205ENST00000531042 ATRIPQ8WXE1 791 aa16.99■□□□□ 0.31
CPSF1-205ENST00000531042 RUBCNQ92622 972 aa16.99■□□□□ 0.31
CPSF1-205ENST00000531042 MSANTD3Q96H12 275 aa16.99■□□□□ 0.31
CPSF1-205ENST00000531042 FAM84AQ96KN4 292 aa16.99■□□□□ 0.31
CPSF1-205ENST00000531042 ZNF396Q96N95 335 aaPredicted RBP16.99■□□□□ 0.31
CPSF1-205ENST00000531042 IER2Q9BTL4 223 aa16.99■□□□□ 0.31
CPSF1-205ENST00000531042 LRRC27Q9C0I9 530 aa16.99■□□□□ 0.31
CPSF1-205ENST00000531042 TNMDQ9H2S6 317 aa16.99■□□□□ 0.31
CPSF1-205ENST00000531042 C8orf33Q9H7E9 229 aaPredicted RBP16.99■□□□□ 0.31
CPSF1-205ENST00000531042 PDE11AQ9HCR9 933 aa16.99■□□□□ 0.31
CPSF1-205ENST00000531042 TMLHEQ9NVH6 421 aa16.99■□□□□ 0.31
CPSF1-205ENST00000531042 KBTBD4Q9NVX7 518 aa16.99■□□□□ 0.31
CPSF1-205ENST00000531042 TFIP11Q9UBB9 837 aaKnown RBP16.99■□□□□ 0.31
CPSF1-205ENST00000531042 ITGA11Q9UKX5 1188 aa16.99■□□□□ 0.31
CPSF1-205ENST00000531042 L1RE1Q9UN81 338 aa16.99■□□□□ 0.31
CPSF1-205ENST00000531042 PCDHB5Q9Y5E4 795 aa16.99■□□□□ 0.31
CPSF1-205ENST00000531042 DENND4CQ5VZ89 1909 aa16.99■□□□□ 0.31
CPSF1-205ENST00000531042 OTOGLQ3ZCN5 2332 aa16.98■□□□□ 0.31
CPSF1-205ENST00000531042 KIAA0391O15091 583 aaKnown RBP16.98■□□□□ 0.31
CPSF1-205ENST00000531042 HUS1O60921 280 aa16.98■□□□□ 0.31
CPSF1-205ENST00000531042 LILRB5O75023 590 aa16.98■□□□□ 0.31
CPSF1-205ENST00000531042 PRAMEF12O95522 483 aa16.98■□□□□ 0.31
CPSF1-205ENST00000531042 CHRNB1P11230 501 aa16.98■□□□□ 0.31
CPSF1-205ENST00000531042 ID4P47928 161 aa16.98■□□□□ 0.31
CPSF1-205ENST00000531042 KPNA1P52294 538 aaPredicted RBP16.98■□□□□ 0.31
CPSF1-205ENST00000531042 TSPY1Q01534 308 aa16.98■□□□□ 0.31
CPSF1-205ENST00000531042 C1orf228Q6PIY5 440 aa16.98■□□□□ 0.31
CPSF1-205ENST00000531042 KIAA2013Q8IYS2 634 aa16.98■□□□□ 0.31
CPSF1-205ENST00000531042 TMEM86AQ8N2M4 240 aa16.98■□□□□ 0.31
CPSF1-205ENST00000531042 GLIS3Q8NEA6 775 aa16.98■□□□□ 0.31
CPSF1-205ENST00000531042 ZFYVE19Q96K21 471 aa16.98■□□□□ 0.31
CPSF1-205ENST00000531042 GCNAQ96QF7 691 aa16.98■□□□□ 0.31
CPSF1-205ENST00000531042 HINFPQ9BQA5 517 aa16.98■□□□□ 0.31
CPSF1-205ENST00000531042 ACBD6Q9BR61 282 aa16.98■□□□□ 0.31
CPSF1-205ENST00000531042 SLC46A2Q9BY10 475 aa16.98■□□□□ 0.31
CPSF1-205ENST00000531042 FAM126AQ9BYI3 521 aaPredicted RBP16.98■□□□□ 0.31
CPSF1-205ENST00000531042 TRIM9Q9C026 710 aa16.98■□□□□ 0.31
CPSF1-205ENST00000531042 CUEDC2Q9H467 287 aa16.98■□□□□ 0.31
CPSF1-205ENST00000531042 GDAP2Q9NXN4 497 aa16.98■□□□□ 0.31
CPSF1-205ENST00000531042 SIX4Q9UIU6 781 aa16.98■□□□□ 0.31
CPSF1-205ENST00000531042 SLC38A8A6NNN8 435 aa16.97■□□□□ 0.31
CPSF1-205ENST00000531042 YEATS4O95619 227 aa16.97■□□□□ 0.31
CPSF1-205ENST00000531042 F11P03951 625 aa16.97■□□□□ 0.31
CPSF1-205ENST00000531042 KRT19P08727 400 aa16.97■□□□□ 0.31
CPSF1-205ENST00000531042 TDGF1P13385 188 aa16.97■□□□□ 0.31
CPSF1-205ENST00000531042 HMGA1P17096 107 aaKnown RBP16.97■□□□□ 0.31
CPSF1-205ENST00000531042 SOX9P48436 509 aa16.97■□□□□ 0.31
CPSF1-205ENST00000531042 RBP5P82980 135 aa16.97■□□□□ 0.31
CPSF1-205ENST00000531042 BFSP1Q12934 665 aa16.97■□□□□ 0.31
CPSF1-205ENST00000531042 NFE2Q16621 373 aaPredicted RBP16.97■□□□□ 0.31
CPSF1-205ENST00000531042 STXBP4Q6ZWJ1 553 aa16.97■□□□□ 0.31
CPSF1-205ENST00000531042 TMEM150AQ86TG1 271 aa16.97■□□□□ 0.31
CPSF1-205ENST00000531042 DCLK2Q8N568 766 aa16.97■□□□□ 0.31
CPSF1-205ENST00000531042 BPIFB1Q8TDL5 484 aa16.97■□□□□ 0.31
CPSF1-205ENST00000531042 LEO1Q8WVC0 666 aaPredicted RBP16.97■□□□□ 0.31
CPSF1-205ENST00000531042 HPS3Q969F9 1004 aa16.97■□□□□ 0.31
CPSF1-205ENST00000531042 PI4K2AQ9BTU6 479 aa16.97■□□□□ 0.31
CPSF1-205ENST00000531042 MTMR12Q9C0I1 747 aa16.97■□□□□ 0.31
CPSF1-205ENST00000531042 DDX43Q9NXZ2 648 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms