RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.73□□□□□ -0.37
LTBP3-219ENST00000530990 ARMCX3Q9UH62 379 aaPredicted RBP12.73□□□□□ -0.37
LTBP3-219ENST00000530990 RWDD2AQ9UIY3 292 aa12.73□□□□□ -0.37
LTBP3-219ENST00000530990 YIPF1Q9Y548 306 aa12.73□□□□□ -0.37
LTBP3-219ENST00000530990 NME7Q9Y5B8 376 aa12.73□□□□□ -0.37
LTBP3-219ENST00000530990 OBSL1O75147 1896 aa12.72□□□□□ -0.37
LTBP3-219ENST00000530990 CLUHO75153 1309 aa12.72□□□□□ -0.37
LTBP3-219ENST00000530990 LRRN2O75325 713 aa12.72□□□□□ -0.37
LTBP3-219ENST00000530990 ASS1P00966 412 aaKnown RBP12.72□□□□□ -0.37
LTBP3-219ENST00000530990 WARSP23381 471 aaKnown RBP12.72□□□□□ -0.37
LTBP3-219ENST00000530990 GTF2H1P32780 548 aa12.72□□□□□ -0.37
LTBP3-219ENST00000530990 RAP1GAPP47736 663 aa12.72□□□□□ -0.37
LTBP3-219ENST00000530990 LHX1P48742 406 aa12.72□□□□□ -0.37
LTBP3-219ENST00000530990 NOP14P78316 857 aaKnown RBP12.72□□□□□ -0.37
LTBP3-219ENST00000530990 TSPY1Q01534 308 aa12.72□□□□□ -0.37
LTBP3-219ENST00000530990 CBWD6Q4V339 395 aa12.72□□□□□ -0.37
LTBP3-219ENST00000530990 INTS6LQ5JSJ4 861 aaKnown RBP12.72□□□□□ -0.37
LTBP3-219ENST00000530990 CBWD3Q5JTY5 395 aa12.72□□□□□ -0.37
LTBP3-219ENST00000530990 CBWD5Q5RIA9 395 aa12.72□□□□□ -0.37
LTBP3-219ENST00000530990 CCDC183Q5T5S1 534 aa12.72□□□□□ -0.37
LTBP3-219ENST00000530990 KRT39Q6A163 491 aa12.72□□□□□ -0.37
LTBP3-219ENST00000530990 FRMD5Q7Z6J6 570 aa12.72□□□□□ -0.37
LTBP3-219ENST00000530990 FILIP1Q7Z7B0 1213 aa12.72□□□□□ -0.37
LTBP3-219ENST00000530990 ATAD1Q8NBU5 361 aa12.72□□□□□ -0.37
LTBP3-219ENST00000530990 RPGRIP1Q96KN7 1286 aa12.72□□□□□ -0.37
LTBP3-219ENST00000530990 PKMYT1Q99640 499 aa12.72□□□□□ -0.37
LTBP3-219ENST00000530990 ACBD6Q9BR61 282 aa12.72□□□□□ -0.37
LTBP3-219ENST00000530990 SRRTQ9BXP5 876 aaKnown RBP12.72□□□□□ -0.37
LTBP3-219ENST00000530990 METTL14Q9HCE5 456 aaKnown RBP12.72□□□□□ -0.37
LTBP3-219ENST00000530990 WDR6Q9NNW5 1121 aaKnown RBP12.72□□□□□ -0.37
LTBP3-219ENST00000530990 CD320Q9NPF0 282 aa12.72□□□□□ -0.37
LTBP3-219ENST00000530990 TMLHEQ9NVH6 421 aa12.72□□□□□ -0.37
LTBP3-219ENST00000530990 HCFC1R1Q9NWW0 138 aa12.72□□□□□ -0.37
LTBP3-219ENST00000530990 TMEM63CQ9P1W3 806 aa12.72□□□□□ -0.37
LTBP3-219ENST00000530990 GREB1Q4ZG55 1949 aa12.71□□□□□ -0.37
LTBP3-219ENST00000530990 C19orf67A6NJJ6 358 aa12.71□□□□□ -0.37
LTBP3-219ENST00000530990 STX10O60499 249 aa12.71□□□□□ -0.37
LTBP3-219ENST00000530990 XYLBO75191 536 aa12.71□□□□□ -0.37
LTBP3-219ENST00000530990 TACC1O75410 805 aa12.71□□□□□ -0.37
LTBP3-219ENST00000530990 SOAT2O75908 522 aa12.71□□□□□ -0.37
LTBP3-219ENST00000530990 LRG1P02750 347 aa12.71□□□□□ -0.37
LTBP3-219ENST00000530990 POU2F2P09086 479 aa12.71□□□□□ -0.37
LTBP3-219ENST00000530990 LMO2P25791 158 aa12.71□□□□□ -0.37
LTBP3-219ENST00000530990 PCSK1P29120 753 aa12.71□□□□□ -0.37
LTBP3-219ENST00000530990 SSTR3P32745 418 aaPredicted RBP12.71□□□□□ -0.37
LTBP3-219ENST00000530990 ASPAP45381 313 aa12.71□□□□□ -0.37
LTBP3-219ENST00000530990 PSMC1P62191 440 aaKnown RBP12.71□□□□□ -0.37
LTBP3-219ENST00000530990 NTHL1P78549 312 aa12.71□□□□□ -0.37
LTBP3-219ENST00000530990 TWF1Q12792 350 aa12.71□□□□□ -0.37
LTBP3-219ENST00000530990 DUSP4Q13115 394 aa12.71□□□□□ -0.37
LTBP3-219ENST00000530990 SGSM1Q2NKQ1 1148 aa12.71□□□□□ -0.37
LTBP3-219ENST00000530990 CYP26C1Q6V0L0 522 aa12.71□□□□□ -0.37
LTBP3-219ENST00000530990 RTL10Q7L3V2 364 aa12.71□□□□□ -0.37
LTBP3-219ENST00000530990 GRASPQ7Z6J2 395 aaPredicted RBP12.71□□□□□ -0.37
LTBP3-219ENST00000530990 DCP1BQ8IZD4 617 aaKnown RBP12.71□□□□□ -0.37
LTBP3-219ENST00000530990 OR6B3Q8NGW1 331 aa12.71□□□□□ -0.37
LTBP3-219ENST00000530990 TAF4BQ92750 862 aa12.71□□□□□ -0.37
LTBP3-219ENST00000530990 SEMA4DQ92854 862 aa12.71□□□□□ -0.37
LTBP3-219ENST00000530990 SYT15Q9BQS2 421 aa12.71□□□□□ -0.37
LTBP3-219ENST00000530990 IMPG2Q9BZV3 1241 aa12.71□□□□□ -0.37
LTBP3-219ENST00000530990 SDCBP2Q9H190 292 aa12.71□□□□□ -0.37
LTBP3-219ENST00000530990 APOBEC3GQ9HC16 384 aaKnown RBP12.71□□□□□ -0.37
LTBP3-219ENST00000530990 ABI2Q9NYB9 513 aaPredicted RBP12.71□□□□□ -0.37
LTBP3-219ENST00000530990 MAFFQ9ULX9 164 aa12.71□□□□□ -0.37
LTBP3-219ENST00000530990 SLC27A5Q9Y2P5 690 aa12.71□□□□□ -0.37
LTBP3-219ENST00000530990 DENND4CQ5VZ89 1909 aa12.7□□□□□ -0.38
LTBP3-219ENST00000530990 C2CD4DB7Z1M9 353 aa12.7□□□□□ -0.38
LTBP3-219ENST00000530990 LOC730098B7Z3J9 87 aa12.7□□□□□ -0.38
LTBP3-219ENST00000530990 ATP2C2O75185 946 aa12.7□□□□□ -0.38
LTBP3-219ENST00000530990 PDGFRBP09619 1106 aa12.7□□□□□ -0.38
LTBP3-219ENST00000530990 CDH8P55286 799 aa12.7□□□□□ -0.38
LTBP3-219ENST00000530990 MARSP56192 900 aaKnown RBP12.7□□□□□ -0.38
LTBP3-219ENST00000530990 MGAT5BQ3V5L5 792 aa12.7□□□□□ -0.38
LTBP3-219ENST00000530990 GET4Q7L5D6 327 aaPredicted RBP12.7□□□□□ -0.38
LTBP3-219ENST00000530990 TRIM59Q8IWR1 403 aa12.7□□□□□ -0.38
LTBP3-219ENST00000530990 GJD3Q8N144 294 aa12.7□□□□□ -0.38
LTBP3-219ENST00000530990 TDRD5Q8NAT2 981 aaKnown RBP12.7□□□□□ -0.38
LTBP3-219ENST00000530990 FBXL13Q8NEE6 735 aa12.7□□□□□ -0.38
LTBP3-219ENST00000530990 SPPL2BQ8TCT7 592 aa12.7□□□□□ -0.38
LTBP3-219ENST00000530990 C2orf15Q8WU43 125 aaKnown RBP12.7□□□□□ -0.38
LTBP3-219ENST00000530990 SEPT5Q99719 369 aaPredicted RBP12.7□□□□□ -0.38
LTBP3-219ENST00000530990 SNX25Q9H3E2 840 aa12.7□□□□□ -0.38
LTBP3-219ENST00000530990 DPEP3Q9H4B8 488 aa12.7□□□□□ -0.38
LTBP3-219ENST00000530990 CRTAC1Q9NQ79 661 aa12.7□□□□□ -0.38
LTBP3-219ENST00000530990 CEP72Q9P209 647 aa12.7□□□□□ -0.38
LTBP3-219ENST00000530990 DNMT3BQ9UBC3 853 aaKnown RBP12.7□□□□□ -0.38
LTBP3-219ENST00000530990 DACH1Q9UI36 760 aa12.7□□□□□ -0.38
LTBP3-219ENST00000530990 GTF3C4Q9UKN8 822 aa12.7□□□□□ -0.38
LTBP3-219ENST00000530990 CDH9Q9ULB4 789 aa12.7□□□□□ -0.38
LTBP3-219ENST00000530990 MYH10P35580 1976 aa12.7□□□□□ -0.38
LTBP3-219ENST00000530990 PATJQ8NI35 1801 aa12.69□□□□□ -0.38
LTBP3-219ENST00000530990 MYBPHLA2RUH7 354 aa12.69□□□□□ -0.38
LTBP3-219ENST00000530990 N4BP1O75113 896 aaKnown RBP12.69□□□□□ -0.38
LTBP3-219ENST00000530990 GNA14O95837 355 aa12.69□□□□□ -0.38
LTBP3-219ENST00000530990 P4HA1P13674 534 aa12.69□□□□□ -0.38
LTBP3-219ENST00000530990 ATF6P18850 670 aa12.69□□□□□ -0.38
LTBP3-219ENST00000530990 ERCC5P28715 1186 aaPredicted RBP12.69□□□□□ -0.38
LTBP3-219ENST00000530990 GNL1P36915 607 aaPredicted RBP12.69□□□□□ -0.38
LTBP3-219ENST00000530990 FMO5P49326 533 aa12.69□□□□□ -0.38
LTBP3-219ENST00000530990 SMARCB1Q12824 385 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms