RNA–Protein interactions for RNA: ENST00000530917.5

UBASH3B-207, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 5

Gene UBASH3B, Length 987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-207ENST00000530917 DESI2Q9BSY9 194 aa12.79□□□□□ -0.36
UBASH3B-207ENST00000530917 HMGXB4Q9UGU5 601 aa12.79□□□□□ -0.36
UBASH3B-207ENST00000530917 PUF60Q9UHX1 559 aaKnown RBP12.79□□□□□ -0.36
UBASH3B-207ENST00000530917 NAGPAQ9UK23 515 aa12.79□□□□□ -0.36
UBASH3B-207ENST00000530917 PCDHB8Q9UN66 801 aa12.79□□□□□ -0.36
UBASH3B-207ENST00000530917 STXBP5LQ9Y2K9 1186 aa12.79□□□□□ -0.36
UBASH3B-207ENST00000530917 PPP2R2CQ9Y2T4 447 aa12.79□□□□□ -0.36
UBASH3B-207ENST00000530917 REXO2Q9Y3B8 237 aaKnown RBP12.79□□□□□ -0.36
UBASH3B-207ENST00000530917 NME7Q9Y5B8 376 aa12.79□□□□□ -0.36
UBASH3B-207ENST00000530917 PCDHA13Q9Y5I0 950 aa12.79□□□□□ -0.36
UBASH3B-207ENST00000530917 NR2E3Q9Y5X4 410 aa12.79□□□□□ -0.36
UBASH3B-207ENST00000530917 PTPRDP23468 1912 aa12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 LAMA3Q16787 3333 aa12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 CARNS1A5YM72 827 aa12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 A8MXQ7 604 aa12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 ESPNB1AK53 854 aa12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 MED7O43513 233 aa12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 CALCAP01258 141 aa12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 LMO2P25791 158 aa12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 ALDH7A1P49419 539 aaKnown RBP12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 HTRA4P83105 476 aaPredicted RBP12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 CYP27A1Q02318 531 aa12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 BTG3Q14201 252 aaPredicted RBP12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 CNGA2Q16280 664 aa12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 CCDC122Q5T0U0 273 aa12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 TAF3Q5VWG9 929 aa12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 FAM117BQ6P1L5 589 aa12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 ZNF662Q6ZS27 426 aa12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 OSTM1Q86WC4 334 aa12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 METTL23Q86XA0 190 aa12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 REXO1L1PQ8IX06 675 aa12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 TFAP2BQ92481 460 aa12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 SLC9A7Q96T83 725 aa12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 PCDHB18PQ96TA0 734 aa12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 ZSWIM1Q9BR11 485 aa12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 MTIF3Q9H2K0 278 aaKnown RBP12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 LUC7LQ9NQ29 371 aaKnown RBP12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 HCSTQ9UBK5 93 aa12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 ADAM28Q9UKQ2 775 aa12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 PCDHGC3Q9UN70 934 aa12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 PRG3Q9Y2Y8 225 aaPredicted RBP12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 SLC4A7Q9Y6M7 1214 aa12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 GBF1Q92538 1859 aa12.78□□□□□ -0.36
UBASH3B-207ENST00000530917 GOLGA6L9A6NEM1 432 aa12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 F8W810 466 aa12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 I3L4J1 428 aa12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 SYN3O14994 580 aa12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 RTN2O75298 545 aa12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 GJB5O95377 273 aa12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 CYP1A1P04798 512 aaPredicted RBP12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 PDGFRBP09619 1106 aa12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 CD19P15391 556 aa12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 BRD2P25440 801 aaKnown RBP12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 ELAVL2Q12926 359 aaKnown RBP12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 ORC1Q13415 861 aa12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 STILQ15468 1287 aa12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 SGO2Q562F6 1265 aa12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 RASIP1Q5U651 963 aa12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 ARHGAP17Q68EM7 881 aa12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 TMCO2Q7Z6W1 182 aaPredicted RBP12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 KIAA1328Q86T90 577 aa12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 ACOT1Q86TX2 421 aa12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 TXLNBQ8N3L3 684 aa12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 HASPINQ8TF76 798 aa12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 TNIP3Q96KP6 325 aa12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 YME1L1Q96TA2 773 aa12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 ISCUQ9H1K1 167 aa12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 LHX5Q9H2C1 402 aa12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 PDCL3Q9H2J4 239 aa12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 SEPT11Q9NVA2 429 aaKnown RBP12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 MARCH5Q9NX47 278 aa12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 CXXC1Q9P0U4 656 aaPredicted RBP12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 INTUQ9ULD6 942 aa12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 INSL6Q9Y581 213 aa12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 TIMM13Q9Y5L4 95 aaPredicted RBP12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 ATP8B3O60423 1300 aa12.77□□□□□ -0.37
UBASH3B-207ENST00000530917 PJA2O43164 708 aa12.76□□□□□ -0.37
UBASH3B-207ENST00000530917 UNGP13051 313 aaPredicted RBP12.76□□□□□ -0.37
UBASH3B-207ENST00000530917 PTPN1P18031 435 aaKnown RBP12.76□□□□□ -0.37
UBASH3B-207ENST00000530917 LAG3P18627 525 aa12.76□□□□□ -0.37
UBASH3B-207ENST00000530917 PCSK1P29120 753 aa12.76□□□□□ -0.37
UBASH3B-207ENST00000530917 VAV2P52735 878 aa12.76□□□□□ -0.37
UBASH3B-207ENST00000530917 CLEC16AQ2KHT3 1053 aa12.76□□□□□ -0.37
UBASH3B-207ENST00000530917 ACAD10Q6JQN1 1059 aa12.76□□□□□ -0.37
UBASH3B-207ENST00000530917 PPP1R2P3Q6NXS1 205 aa12.76□□□□□ -0.37
UBASH3B-207ENST00000530917 KCNT2Q6UVM3 1135 aa12.76□□□□□ -0.37
UBASH3B-207ENST00000530917 LCLAT1Q6UWP7 414 aa12.76□□□□□ -0.37
UBASH3B-207ENST00000530917 PALB2Q86YC2 1186 aa12.76□□□□□ -0.37
UBASH3B-207ENST00000530917 HERC6Q8IVU3 1022 aa12.76□□□□□ -0.37
UBASH3B-207ENST00000530917 THEM5Q8N1Q8 247 aa12.76□□□□□ -0.37
UBASH3B-207ENST00000530917 B3GALNT2Q8NCR0 500 aa12.76□□□□□ -0.37
UBASH3B-207ENST00000530917 ACBD6Q9BR61 282 aa12.76□□□□□ -0.37
UBASH3B-207ENST00000530917 ZNF518BQ9C0D4 1074 aa12.76□□□□□ -0.37
UBASH3B-207ENST00000530917 DPEP3Q9H4B8 488 aa12.76□□□□□ -0.37
UBASH3B-207ENST00000530917 TRMT1Q9NXH9 659 aaKnown RBP12.76□□□□□ -0.37
UBASH3B-207ENST00000530917 DDX43Q9NXZ2 648 aaKnown RBP12.76□□□□□ -0.37
UBASH3B-207ENST00000530917 CDH9Q9ULB4 789 aa12.76□□□□□ -0.37
UBASH3B-207ENST00000530917 ANKRD62A6NC57 917 aa12.75□□□□□ -0.37
UBASH3B-207ENST00000530917 USP27XA6NNY8 438 aa12.75□□□□□ -0.37
UBASH3B-207ENST00000530917 NT5C1B-RDH14C9J2C7 533 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms