RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 ELP3Q9H9T3 547 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 TMEM51Q9NW97 253 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 WDR35Q9P2L0 1181 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 hCG_1818297A0A087WSY0 165 aa18.17■□□□□ 0.5
BRCA2-204ENST00000530893 F8VP50 259 aa18.17■□□□□ 0.5
BRCA2-204ENST00000530893 INO80B-WBP1J3KQ70 363 aa18.17■□□□□ 0.5
BRCA2-204ENST00000530893 DNALI1O14645 258 aaPredicted RBP18.17■□□□□ 0.5
BRCA2-204ENST00000530893 ATF7P17544 494 aaPredicted RBP18.17■□□□□ 0.5
BRCA2-204ENST00000530893 VPS41P49754 854 aa18.17■□□□□ 0.5
BRCA2-204ENST00000530893 P3H1Q32P28 736 aa18.17■□□□□ 0.5
BRCA2-204ENST00000530893 ZNF394Q53GI3 561 aa18.17■□□□□ 0.5
BRCA2-204ENST00000530893 THNSL1Q8IYQ7 743 aa18.17■□□□□ 0.5
BRCA2-204ENST00000530893 TFAP2BQ92481 460 aa18.17■□□□□ 0.5
BRCA2-204ENST00000530893 MMP19Q99542 508 aa18.17■□□□□ 0.5
BRCA2-204ENST00000530893 INO80BQ9C086 356 aaPredicted RBP18.17■□□□□ 0.5
BRCA2-204ENST00000530893 KDM4CQ9H3R0 1056 aa18.17■□□□□ 0.5
BRCA2-204ENST00000530893 RPF1Q9H9Y2 349 aaKnown RBP18.17■□□□□ 0.5
BRCA2-204ENST00000530893 PRMT7Q9NVM4 692 aaPredicted RBP18.17■□□□□ 0.5
BRCA2-204ENST00000530893 SAMD15Q9P1V8 674 aa18.17■□□□□ 0.5
BRCA2-204ENST00000530893 DNPEPQ9ULA0 475 aa18.17■□□□□ 0.5
BRCA2-204ENST00000530893 ZNF148Q9UQR1 794 aa18.17■□□□□ 0.5
BRCA2-204ENST00000530893 SIGLEC16A6NMB1 481 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 ITGAVP06756 1048 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 PGK2P07205 417 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 GHRP10912 638 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 CDKN2BP42772 138 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 OGDHQ02218 1023 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 PPARDQ03181 441 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 MBTD1Q05BQ5 628 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 FAM187BQ17R55 369 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 NLRP4Q96MN2 994 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 CFAP57Q96MR6 1250 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 RBPJLQ9UBG7 517 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 PI4K2BG5E9Z4 385 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 KRT7P08729 469 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 KRT10P13645 584 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 OSBPP22059 807 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 VCPP55072 806 aaKnown RBP18.16■□□□□ 0.5
BRCA2-204ENST00000530893 TNFAIP2Q03169 654 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 TTLL4Q14679 1199 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 MORF4L2Q15014 288 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 TMEM132AQ24JP5 1023 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 ATP13A4Q4VNC1 1196 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 ZNF667Q5HYK9 610 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 KAZNQ674X7 775 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 EFCAB12Q6NXP0 572 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 NLGN2Q8NFZ4 835 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 RBM15Q96T37 977 aaKnown RBP eCLIP18.16■□□□□ 0.5
BRCA2-204ENST00000530893 OSBPL7Q9BZF2 842 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 CDT1Q9H211 546 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 FAM124BQ9H5Z6 455 aaPredicted RBP18.16■□□□□ 0.5
BRCA2-204ENST00000530893 EFCC1Q9HA90 598 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 ERAP1Q9NZ08 941 aa18.16■□□□□ 0.5
BRCA2-204ENST00000530893 TMEM120BA0PK00 339 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 TXNP10599 105 aaKnown RBP18.15■□□□□ 0.5
BRCA2-204ENST00000530893 TCF4P15884 667 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 NF2P35240 595 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 MAGEA4P43358 317 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 PPIL2Q13356 520 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 OASLQ15646 514 aaKnown RBP18.15■□□□□ 0.5
BRCA2-204ENST00000530893 KYAT1Q16773 422 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 ZNF484Q5JVG2 852 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 FASTKD5Q7L8L6 764 aaKnown RBP18.15■□□□□ 0.5
BRCA2-204ENST00000530893 TTC13Q8NBP0 860 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 CCT6BQ92526 530 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 FAM118BQ9BPY3 351 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 KLHL11Q9NVR0 708 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 TPX2Q9ULW0 747 aaKnown RBP18.15■□□□□ 0.5
BRCA2-204ENST00000530893 ADM5C9JUS6 153 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 KRT3P12035 628 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 ATICP31939 592 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 PHKA2P46019 1235 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 NR1H3Q13133 447 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 HADHQ16836 314 aaKnown RBP18.15■□□□□ 0.5
BRCA2-204ENST00000530893 CCDC38Q502W7 563 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 ANKRD20A8PQ5CZ79 823 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 SCARA5Q6ZMJ2 495 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 IFNLR1Q8IU57 520 aaPredicted RBP18.15■□□□□ 0.5
BRCA2-204ENST00000530893 CCDC13Q8IYE1 715 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 LRRC34Q8IZ02 419 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 DYDC1Q8WWB3 177 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 KAT2BQ92831 832 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 PHACTR1Q9C0D0 580 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 VRTNQ9H8Y1 702 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 PPCSQ9HAB8 311 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 PCDH9Q9HC56 1237 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 TXNRD2Q9NNW7 524 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 SHOC2Q9UQ13 582 aa18.15■□□□□ 0.5
BRCA2-204ENST00000530893 SBF1O95248 1867 aa18.14■□□□□ 0.49
BRCA2-204ENST00000530893 ZSWIM8A7E2V4 1837 aa18.14■□□□□ 0.49
BRCA2-204ENST00000530893 LRRD1A4D1F6 860 aa18.14■□□□□ 0.49
BRCA2-204ENST00000530893 ASB14A6NK59 587 aa18.14■□□□□ 0.49
BRCA2-204ENST00000530893 B4GALT5O43286 388 aa18.14■□□□□ 0.49
BRCA2-204ENST00000530893 MCF2P10911 925 aa18.14■□□□□ 0.49
BRCA2-204ENST00000530893 ARSEP51690 589 aa18.14■□□□□ 0.49
BRCA2-204ENST00000530893 ACAP1Q15027 740 aa18.14■□□□□ 0.49
BRCA2-204ENST00000530893 PTPN20Q4JDL3 420 aa18.14■□□□□ 0.49
BRCA2-204ENST00000530893 DENND1BQ6P3S1 775 aa18.14■□□□□ 0.49
BRCA2-204ENST00000530893 VSTM1Q6UX27 236 aa18.14■□□□□ 0.49
BRCA2-204ENST00000530893 PCGF5Q86SE9 256 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms