RNA–Protein interactions for RNA: ENST00000530746.1

PPFIA1-216, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-216ENST00000530746 BIRC3Q13489 604 aa16.02■□□□□ 0.16
PPFIA1-216ENST00000530746 TDGQ13569 410 aa16.02■□□□□ 0.16
PPFIA1-216ENST00000530746 NFE2Q16621 373 aaPredicted RBP16.02■□□□□ 0.16
PPFIA1-216ENST00000530746 SLC5A9Q2M3M2 681 aa16.02■□□□□ 0.16
PPFIA1-216ENST00000530746 WDR72Q3MJ13 1102 aa16.02■□□□□ 0.16
PPFIA1-216ENST00000530746 CYP4A22Q5TCH4 519 aa16.02■□□□□ 0.16
PPFIA1-216ENST00000530746 INTS8Q75QN2 995 aaKnown RBP16.02■□□□□ 0.16
PPFIA1-216ENST00000530746 FAM186BQ8IYM0 893 aa16.02■□□□□ 0.16
PPFIA1-216ENST00000530746 SPPL2BQ8TCT7 592 aa16.02■□□□□ 0.16
PPFIA1-216ENST00000530746 KBTBD7Q8WVZ9 684 aa16.02■□□□□ 0.16
PPFIA1-216ENST00000530746 NXPE3Q969Y0 559 aa16.02■□□□□ 0.16
PPFIA1-216ENST00000530746 SYAP1Q96A49 352 aaPredicted RBP16.02■□□□□ 0.16
PPFIA1-216ENST00000530746 MMS19Q96T76 1030 aa16.02■□□□□ 0.16
PPFIA1-216ENST00000530746 XYLT2Q9H1B5 865 aa16.02■□□□□ 0.16
PPFIA1-216ENST00000530746 PTPRDP23468 1912 aa16.02■□□□□ 0.15
PPFIA1-216ENST00000530746 ANHXE9PGG2 379 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 ZNF197O14709 1029 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 MICAL2O94851 1124 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 KRT13P13646 458 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 CDR1P51861 262 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 EPHA5P54756 1037 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 TNNC1P63316 161 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 ENPEPQ07075 957 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 NCOA4Q13772 614 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 MGAT5BQ3V5L5 792 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 ZACNQ401N2 412 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 INTS6LQ5JSJ4 861 aaKnown RBP16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 PRSS36Q5K4E3 855 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 C1orf220Q5T0J3 134 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 PDZD4Q76G19 769 aaPredicted RBP16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 NPAS3Q8IXF0 933 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 ADSSL1Q8N142 457 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 LEMD2Q8NC56 503 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 RSAD2Q8WXG1 361 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 ING5Q8WYH8 240 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 PKMYT1Q99640 499 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 SEPT5Q99719 369 aaPredicted RBP16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 TSG101Q99816 390 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 MKNK1Q9BUB5 465 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 DNAJC25Q9H1X3 360 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 SMOC2Q9H3U7 446 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 VRTNQ9H8Y1 702 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 ASAH2Q9NR71 780 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 TMLHEQ9NVH6 421 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 ABI2Q9NYB9 513 aaPredicted RBP16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 MAN1B1Q9UKM7 699 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 ASB3Q9Y575 518 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 PCDHB5Q9Y5E4 795 aa16.01■□□□□ 0.15
PPFIA1-216ENST00000530746 DENND4CQ5VZ89 1909 aa16■□□□□ 0.15
PPFIA1-216ENST00000530746 TMEM221A6NGB7 291 aa16■□□□□ 0.15
PPFIA1-216ENST00000530746 M0R296 226 aa16■□□□□ 0.15
PPFIA1-216ENST00000530746 CETN3O15182 167 aa16■□□□□ 0.15
PPFIA1-216ENST00000530746 HCRTO43612 131 aa16■□□□□ 0.15
PPFIA1-216ENST00000530746 TACC1O75410 805 aa16■□□□□ 0.15
PPFIA1-216ENST00000530746 SOAT2O75908 522 aa16■□□□□ 0.15
PPFIA1-216ENST00000530746 VNN1O95497 513 aa16■□□□□ 0.15
PPFIA1-216ENST00000530746 FAM163BP0C2L3 166 aa16■□□□□ 0.15
PPFIA1-216ENST00000530746 HAPLN1P10915 354 aaPredicted RBP16■□□□□ 0.15
PPFIA1-216ENST00000530746 WARSP23381 471 aaKnown RBP16■□□□□ 0.15
PPFIA1-216ENST00000530746 CCR2P41597 374 aa16■□□□□ 0.15
PPFIA1-216ENST00000530746 STIM1Q13586 685 aa16■□□□□ 0.15
PPFIA1-216ENST00000530746 HTR4Q13639 388 aa16■□□□□ 0.15
PPFIA1-216ENST00000530746 ZNF699Q32M78 642 aa16■□□□□ 0.15
PPFIA1-216ENST00000530746 ISM2Q6H9L7 571 aa16■□□□□ 0.15
PPFIA1-216ENST00000530746 SV2AQ7L0J3 742 aa16■□□□□ 0.15
PPFIA1-216ENST00000530746 HS6ST3Q8IZP7 471 aa16■□□□□ 0.15
PPFIA1-216ENST00000530746 PSMG2Q969U7 264 aa16■□□□□ 0.15
PPFIA1-216ENST00000530746 TCEAL4Q96EI5 215 aa16■□□□□ 0.15
PPFIA1-216ENST00000530746 GDE1Q9NZC3 331 aa16■□□□□ 0.15
PPFIA1-216ENST00000530746 NXF1Q9UBU9 619 aaKnown RBP16■□□□□ 0.15
PPFIA1-216ENST00000530746 GTF3C4Q9UKN8 822 aa16■□□□□ 0.15
PPFIA1-216ENST00000530746 CDH9Q9ULB4 789 aa16■□□□□ 0.15
PPFIA1-216ENST00000530746 DUSP12Q9UNI6 340 aa16■□□□□ 0.15
PPFIA1-216ENST00000530746 PSMA7O14818 248 aa15.99■□□□□ 0.15
PPFIA1-216ENST00000530746 EPB41P11171 864 aaKnown RBP15.99■□□□□ 0.15
PPFIA1-216ENST00000530746 MYL4P12829 197 aa15.99■□□□□ 0.15
PPFIA1-216ENST00000530746 CEBPBP17676 345 aa15.99■□□□□ 0.15
PPFIA1-216ENST00000530746 ATF6P18850 670 aa15.99■□□□□ 0.15
PPFIA1-216ENST00000530746 LMO2P25791 158 aa15.99■□□□□ 0.15
PPFIA1-216ENST00000530746 PPP1R2P41236 205 aa15.99■□□□□ 0.15
PPFIA1-216ENST00000530746 PMS1P54277 932 aaKnown RBP15.99■□□□□ 0.15
PPFIA1-216ENST00000530746 MCCD1P59942 119 aaPredicted RBP15.99■□□□□ 0.15
PPFIA1-216ENST00000530746 FKBP3Q00688 224 aaKnown RBP15.99■□□□□ 0.15
PPFIA1-216ENST00000530746 LRRC63Q05C16 580 aa15.99■□□□□ 0.15
PPFIA1-216ENST00000530746 VEPH1Q14D04 833 aa15.99■□□□□ 0.15
PPFIA1-216ENST00000530746 SGSM1Q2NKQ1 1148 aa15.99■□□□□ 0.15
PPFIA1-216ENST00000530746 ZNF667Q5HYK9 610 aa15.99■□□□□ 0.15
PPFIA1-216ENST00000530746 ANKRD40Q6AI12 368 aa15.99■□□□□ 0.15
PPFIA1-216ENST00000530746 FAM171BQ6P995 826 aa15.99■□□□□ 0.15
PPFIA1-216ENST00000530746 CLEC17AQ6ZS10 378 aa15.99■□□□□ 0.15
PPFIA1-216ENST00000530746 MTSS1LQ765P7 747 aa15.99■□□□□ 0.15
PPFIA1-216ENST00000530746 DNAJB7Q7Z6W7 309 aaPredicted RBP15.99■□□□□ 0.15
PPFIA1-216ENST00000530746 ITIH5Q86UX2 942 aa15.99■□□□□ 0.15
PPFIA1-216ENST00000530746 TMC8Q8IU68 726 aa15.99■□□□□ 0.15
PPFIA1-216ENST00000530746 SLC44A3Q8N4M1 653 aa15.99■□□□□ 0.15
PPFIA1-216ENST00000530746 FGF14Q92915 247 aa15.99■□□□□ 0.15
PPFIA1-216ENST00000530746 MCRS1Q96EZ8 462 aa15.99■□□□□ 0.15
PPFIA1-216ENST00000530746 ASIC4Q96FT7 647 aa15.99■□□□□ 0.15
PPFIA1-216ENST00000530746 EEF2KMTQ96G04 330 aa15.99■□□□□ 0.15
PPFIA1-216ENST00000530746 DHTKD1Q96HY7 919 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms