RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 C9orf57Q5W0N0 161 aa15.34■□□□□ 0.05
TTC39A-216ENST00000530004 DDX27Q96GQ7 796 aaKnown RBP15.34■□□□□ 0.05
TTC39A-216ENST00000530004 UROC1Q96N76 676 aa15.34■□□□□ 0.05
TTC39A-216ENST00000530004 BCO2Q9BYV7 579 aa15.34■□□□□ 0.05
TTC39A-216ENST00000530004 L2HGDHQ9H9P8 463 aa15.34■□□□□ 0.05
TTC39A-216ENST00000530004 MRPL42Q9Y6G3 142 aaKnown RBP15.34■□□□□ 0.05
TTC39A-216ENST00000530004 LCHNA4D1U4 455 aa15.34■□□□□ 0.05
TTC39A-216ENST00000530004 ANKRD62A6NC57 917 aa15.34■□□□□ 0.05
TTC39A-216ENST00000530004 PODXLO00592 558 aa15.34■□□□□ 0.05
TTC39A-216ENST00000530004 PIRO00625 290 aa15.34■□□□□ 0.05
TTC39A-216ENST00000530004 ENC1O14682 589 aa15.34■□□□□ 0.05
TTC39A-216ENST00000530004 STAU1O95793 577 aaKnown RBP15.34■□□□□ 0.05
TTC39A-216ENST00000530004 GZMAP12544 262 aa15.34■□□□□ 0.05
TTC39A-216ENST00000530004 MYO1EQ12965 1108 aa15.34■□□□□ 0.05
TTC39A-216ENST00000530004 ZNF394Q53GI3 561 aa15.34■□□□□ 0.05
TTC39A-216ENST00000530004 FIBCD1Q8N539 461 aa15.34■□□□□ 0.05
TTC39A-216ENST00000530004 CTNNBL1Q8WYA6 563 aaPredicted RBP15.34■□□□□ 0.05
TTC39A-216ENST00000530004 RABGGTAQ92696 567 aa15.34■□□□□ 0.05
TTC39A-216ENST00000530004 TMEM175Q9BSA9 504 aa15.34■□□□□ 0.05
TTC39A-216ENST00000530004 SDCBP2Q9H190 292 aa15.34■□□□□ 0.05
TTC39A-216ENST00000530004 ISCUQ9H1K1 167 aa15.34■□□□□ 0.05
TTC39A-216ENST00000530004 SMYD3Q9H7B4 428 aa15.34■□□□□ 0.05
TTC39A-216ENST00000530004 PUF60Q9UHX1 559 aaKnown RBP15.34■□□□□ 0.05
TTC39A-216ENST00000530004 TNRC18O15417 2968 aaPredicted RBP15.33■□□□□ 0.05
TTC39A-216ENST00000530004 FNDC1Q4ZHG4 1894 aaPredicted RBP15.33■□□□□ 0.05
TTC39A-216ENST00000530004 TRIP11Q15643 1979 aa15.33■□□□□ 0.04
TTC39A-216ENST00000530004 A0A0A6YYK5 440 aaPredicted RBP15.33■□□□□ 0.04
TTC39A-216ENST00000530004 PPEF2O14830 753 aa15.33■□□□□ 0.04
TTC39A-216ENST00000530004 THAP12O43422 761 aa15.33■□□□□ 0.04
TTC39A-216ENST00000530004 ALDH2P05091 517 aa15.33■□□□□ 0.04
TTC39A-216ENST00000530004 GALTP07902 379 aa15.33■□□□□ 0.04
TTC39A-216ENST00000530004 LINC00271P0C7V0 271 aa15.33■□□□□ 0.04
TTC39A-216ENST00000530004 NOP2P46087 812 aaKnown RBP15.33■□□□□ 0.04
TTC39A-216ENST00000530004 OR1G1P47890 313 aa15.33■□□□□ 0.04
TTC39A-216ENST00000530004 CDH8P55286 799 aa15.33■□□□□ 0.04
TTC39A-216ENST00000530004 TNNC1P63316 161 aa15.33■□□□□ 0.04
TTC39A-216ENST00000530004 CLEC16AQ2KHT3 1053 aa15.33■□□□□ 0.04
TTC39A-216ENST00000530004 MYRIPQ8NFW9 859 aa15.33■□□□□ 0.04
TTC39A-216ENST00000530004 THAP2Q9H0W7 228 aa15.33■□□□□ 0.04
TTC39A-216ENST00000530004 PDCL3Q9H2J4 239 aa15.33■□□□□ 0.04
TTC39A-216ENST00000530004 PCDHA11Q9Y5I1 949 aa15.33■□□□□ 0.04
TTC39A-216ENST00000530004 NRP1O14786 923 aa15.32■□□□□ 0.04
TTC39A-216ENST00000530004 ATP1A1P05023 1023 aaKnown RBP15.32■□□□□ 0.04
TTC39A-216ENST00000530004 MYOGP15173 224 aa15.32■□□□□ 0.04
TTC39A-216ENST00000530004 IGFBP6P24592 240 aaPredicted RBP15.32■□□□□ 0.04
TTC39A-216ENST00000530004 PBX3P40426 434 aa15.32■□□□□ 0.04
TTC39A-216ENST00000530004 SLC11A1P49279 550 aa15.32■□□□□ 0.04
TTC39A-216ENST00000530004 ALDH7A1P49419 539 aaKnown RBP15.32■□□□□ 0.04
TTC39A-216ENST00000530004 TERF1P54274 439 aa15.32■□□□□ 0.04
TTC39A-216ENST00000530004 BCAR1P56945 870 aa15.32■□□□□ 0.04
TTC39A-216ENST00000530004 IFI16Q16666 785 aaKnown RBP15.32■□□□□ 0.04
TTC39A-216ENST00000530004 SPOUT1Q5T280 376 aaKnown RBP15.32■□□□□ 0.04
TTC39A-216ENST00000530004 SMYD5Q6GMV2 418 aa15.32■□□□□ 0.04
TTC39A-216ENST00000530004 LRRC52Q8N7C0 313 aa15.32■□□□□ 0.04
TTC39A-216ENST00000530004 C3orf58Q8NDZ4 430 aa15.32■□□□□ 0.04
TTC39A-216ENST00000530004 CLP1Q92989 425 aaKnown RBP15.32■□□□□ 0.04
TTC39A-216ENST00000530004 CYP3A43Q9HB55 503 aa15.32■□□□□ 0.04
TTC39A-216ENST00000530004 FAN1Q9Y2M0 1017 aa15.32■□□□□ 0.04
TTC39A-216ENST00000530004 MRFAP1Q9Y605 127 aa15.32■□□□□ 0.04
TTC39A-216ENST00000530004 NCANO14594 1321 aa15.32■□□□□ 0.04
TTC39A-216ENST00000530004 RANBP2P49792 3224 aaKnown RBP15.32■□□□□ 0.04
TTC39A-216ENST00000530004 PALMO75781 387 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 B3GAT3O94766 335 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 LAG3P18627 525 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 DCLRE1AQ6PJP8 1040 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 KCNT2Q6UVM3 1135 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 RFFLQ8WZ73 363 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 ARHGEF26Q96DR7 871 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 MMS19Q96T76 1030 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 PBX4Q9BYU1 374 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 YBX2Q9Y2T7 364 aaKnown RBP15.31■□□□□ 0.04
TTC39A-216ENST00000530004 PRG3Q9Y2Y8 225 aaPredicted RBP15.31■□□□□ 0.04
TTC39A-216ENST00000530004 JRKLQ9Y4A0 524 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 PCDHGC5Q9Y5F6 944 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 PDCD11Q14690 1871 aaKnown RBP15.31■□□□□ 0.04
TTC39A-216ENST00000530004 GRID2IPA4D2P6 1211 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 LINC01553A4QN01 128 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 NT5C1B-RDH14C9J2C7 533 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 F8W810 466 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 TMEM189-UBE2V1I3L0A0 370 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 KIF4AO95239 1232 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 ITGB1P05556 798 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 CA3P07451 260 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 CFHP08603 1231 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 UNGP13051 313 aaPredicted RBP15.31■□□□□ 0.04
TTC39A-216ENST00000530004 BRD2P25440 801 aaKnown RBP15.31■□□□□ 0.04
TTC39A-216ENST00000530004 SSTR3P32745 418 aaPredicted RBP15.31■□□□□ 0.04
TTC39A-216ENST00000530004 PBX2P40425 430 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 PNPLA4P41247 253 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 ACAD10Q6JQN1 1059 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 CD300LGQ6UXG3 332 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 TRIM72Q6ZMU5 477 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 COLGALT1Q8NBJ5 622 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 ZNF606Q8WXB4 792 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 ZNF560Q96MR9 790 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 ZNF558Q96NG5 402 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 MARCH5Q9NX47 278 aa15.31■□□□□ 0.04
TTC39A-216ENST00000530004 TDRD15B5MCY1 1934 aaKnown RBP15.31■□□□□ 0.04
TTC39A-216ENST00000530004 UQCRHLA0A096LP55 91 aa15.3■□□□□ 0.04
TTC39A-216ENST00000530004 CARNS1A5YM72 827 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms