RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 ATP5HO75947 161 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 ITGB3P05106 788 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 UBTFL6P0CB48 400 aaPredicted RBP10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 CYP3A7P24462 503 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 ADRA1DP25100 572 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 EPHB2P29323 1055 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 SOX11P35716 441 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 CNTN2Q02246 1040 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 AP1ARQ63HQ0 302 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 RWDD4Q6NW29 188 aaKnown RBP10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 ZNF280CQ8ND82 737 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 KAT6AQ92794 2004 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 SIK2Q9H0K1 926 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 KDM4CQ9H3R0 1056 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 MANSC1Q9H8J5 431 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 MYOZ2Q9NPC6 264 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 WHRNQ9P202 907 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 SMG5Q9UPR3 1016 aaKnown RBP10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 SHOX2O60902 331 aaPredicted RBP10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 DPEP1P16444 411 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 CCND1P24385 295 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 HOXA10P31260 410 aaPredicted RBP10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 TAS2R40P59535 323 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 PGM5Q15124 567 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 SUPT20HL1Q3ZLR7 823 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 BTNL9Q6UXG8 535 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 NETO2Q8NC67 525 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 LPAR1Q92633 364 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 MKL1Q969V6 931 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 NIF3L1Q9GZT8 377 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 NOD1Q9Y239 953 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 KCPQ6ZWJ8 1503 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 DDX3YO15523 660 aaKnown RBP10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 TXNP10599 105 aaKnown RBP10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 PAX7P23759 505 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 BAG6P46379 1132 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 CXCL9Q07325 125 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 THOC5Q13769 683 aaKnown RBP10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 RCN1Q15293 331 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 SGSM1Q2NKQ1 1148 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 SLC25A41Q8N5S1 370 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 DDX27Q96GQ7 796 aaKnown RBP10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 CLMNQ96JQ2 1002 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 IDI2Q9BXS1 227 aa10.39□□□□□ -0.75
CCDC90B-214ENST00000529689 ZCCHC18P0CG32 403 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 PYGBP11216 843 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 BGNP21810 368 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 TNFRSF8P28908 595 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 TPD52P55327 224 aaPredicted RBP10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 POU5F1BQ06416 359 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 PIGHQ14442 188 aaPredicted RBP10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 COBLL1Q53SF7 1204 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 SYDE1Q6ZW31 735 aaPredicted RBP10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 PAFAH2Q99487 392 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 DDX56Q9NY93 547 aaKnown RBP10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 RPA3P35244 121 aaPredicted RBP10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 GEMIN4P57678 1058 aaKnown RBP10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 CHI3L2Q15782 390 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 CCNG2Q16589 344 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 ACCSLQ4AC99 568 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 TMEM154Q6P9G4 183 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 SPOCD1Q6ZMY3 1216 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 CCDC60Q8IWA6 550 aaPredicted RBP10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 TRIM42Q8IWZ5 723 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 C4orf19Q8IY42 314 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 FAM71AQ8IYT1 594 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 ABRAQ8N0Z2 381 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 SIX6OS1Q8N1H7 587 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 OR5B17Q8NGF7 314 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 TCP10LQ8TDR4 215 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 SEPT1Q8WYJ6 367 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 SIX2Q9NPC8 291 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 PXMP2Q9NR77 195 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 CES2O00748 559 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 RXRBP28702 533 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 HOXD13P35453 343 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 TCF7P36402 384 aaPredicted RBP10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 CASP2P42575 452 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 CENPCQ03188 943 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 TFDP3Q5H9I0 405 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 PGBD4Q96DM1 585 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 SENP1Q9P0U3 644 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 RGPD5Q99666 1765 aa10.38□□□□□ -0.75
CCDC90B-214ENST00000529689 hCG_2014768A0A024R1R8 64 aa10.37□□□□□ -0.75
CCDC90B-214ENST00000529689 DGKIO75912 1065 aa10.37□□□□□ -0.75
CCDC90B-214ENST00000529689 MYL2P10916 166 aa10.37□□□□□ -0.75
CCDC90B-214ENST00000529689 GARSP41250 739 aaKnown RBP10.37□□□□□ -0.75
CCDC90B-214ENST00000529689 GMPSP49915 693 aaPredicted RBP10.37□□□□□ -0.75
CCDC90B-214ENST00000529689 MARSP56192 900 aaKnown RBP10.37□□□□□ -0.75
CCDC90B-214ENST00000529689 JAG1P78504 1218 aa10.37□□□□□ -0.75
CCDC90B-214ENST00000529689 SLC12A1Q13621 1099 aa10.37□□□□□ -0.75
CCDC90B-214ENST00000529689 ITIH4Q14624 930 aa10.37□□□□□ -0.75
CCDC90B-214ENST00000529689 PLCB4Q15147 1175 aa10.37□□□□□ -0.75
CCDC90B-214ENST00000529689 SURF1Q15526 300 aa10.37□□□□□ -0.75
CCDC90B-214ENST00000529689 HYIQ5T013 277 aa10.37□□□□□ -0.75
CCDC90B-214ENST00000529689 LRRC6Q86X45 466 aa10.37□□□□□ -0.75
CCDC90B-214ENST00000529689 MIPOL1Q8TD10 442 aa10.37□□□□□ -0.75
CCDC90B-214ENST00000529689 DNAJC9Q8WXX5 260 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms