RNA–Protein interactions for RNA: ENST00000529565.1

CASP4-207, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 4,745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-207ENST00000529565 COPS2P61201 443 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 RPL10AP62906 217 aaKnown RBP4.91□□□□□ -1.62
CASP4-207ENST00000529565 AP1B1Q10567 949 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 PDK2Q15119 407 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 RPS6KA2Q15349 733 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 ZSCAN26Q16670 478 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 SHROOM1Q2M3G4 852 aaPredicted RBP4.91□□□□□ -1.62
CASP4-207ENST00000529565 PAPD7Q5XG87 772 aaKnown RBP4.91□□□□□ -1.62
CASP4-207ENST00000529565 ATG16L1Q676U5 607 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 SDCCAG8Q86SQ7 713 aaPredicted RBP4.91□□□□□ -1.62
CASP4-207ENST00000529565 ZDHHC17Q8IUH5 632 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 CCDC197Q8NCU1 140 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 UBA3Q8TBC4 463 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 COG1Q8WTW3 980 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 SCG3Q8WXD2 468 aaKnown RBP4.91□□□□□ -1.62
CASP4-207ENST00000529565 TMEM169Q96HH4 297 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 POP1Q99575 1024 aaKnown RBP4.91□□□□□ -1.62
CASP4-207ENST00000529565 TRIM56Q9BRZ2 755 aaKnown RBP4.91□□□□□ -1.62
CASP4-207ENST00000529565 ST6GALNAC4Q9H4F1 302 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 L2HGDHQ9H9P8 463 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 PIDD1Q9HB75 910 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 AVENQ9NQS1 362 aaPredicted RBP4.91□□□□□ -1.62
CASP4-207ENST00000529565 METTL5Q9NRN9 209 aaKnown RBP4.91□□□□□ -1.62
CASP4-207ENST00000529565 RRN3Q9NYV6 651 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 SENP1Q9P0U3 644 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 PAK5Q9P286 719 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 SIK3Q9Y2K2 1263 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 ASTN1O14525 1302 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 UMODL1Q5DID0 1318 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 IGLV3-22A0A075B6J6 115 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 TMEM150BA6NC51 233 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 TMEM88BA6NKF7 163 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 LRRIQ3A6PVS8 624 aaPredicted RBP4.91□□□□□ -1.62
CASP4-207ENST00000529565 ANKRD63C9JTQ0 380 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 EEF2KO00418 725 aaKnown RBP4.91□□□□□ -1.62
CASP4-207ENST00000529565 PTENP60484 403 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 BST2Q10589 180 aaKnown RBP4.91□□□□□ -1.62
CASP4-207ENST00000529565 MTA1Q13330 715 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 BYSLQ13895 437 aaKnown RBP4.91□□□□□ -1.62
CASP4-207ENST00000529565 GLRA4Q5JXX5 417 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 C1orf228Q6PIY5 440 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 SLC13A5Q86YT5 568 aaPredicted RBP4.91□□□□□ -1.62
CASP4-207ENST00000529565 TRAPPC12Q8WVT3 735 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 CYFIP2Q96F07 1278 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 CNPY3Q9BT09 278 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 LRRC1Q9BTT6 524 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 MRPL9Q9BYD2 267 aaKnown RBP4.91□□□□□ -1.62
CASP4-207ENST00000529565 SNTG2Q9NY99 539 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.91□□□□□ -1.62
CASP4-207ENST00000529565 COL22A1Q8NFW1 1626 aaPredicted RBP4.91□□□□□ -1.62
CASP4-207ENST00000529565 PJA2O43164 708 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 AP5Z1O43299 807 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 SPAG6O75602 509 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 AP1G2O75843 785 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 PROSCO94903 275 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 GSTA1P08263 222 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 GSTA2P09210 222 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 BMP6P22004 513 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 EIF4BP23588 611 aaKnown RBP4.91□□□□□ -1.62
CASP4-207ENST00000529565 STIP1P31948 543 aaKnown RBP4.91□□□□□ -1.62
CASP4-207ENST00000529565 SLCO1A2P46721 670 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 ALDH1A3P47895 512 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 MNAT1P51948 309 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 PDIA2Q13087 525 aaKnown RBP4.91□□□□□ -1.62
CASP4-207ENST00000529565 BIRC2Q13490 618 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 ZNF268Q14587 947 aaPredicted RBP4.91□□□□□ -1.62
CASP4-207ENST00000529565 ZNF235Q14590 738 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 NPY5RQ15761 445 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 HIF1AQ16665 826 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 DCAF6Q58WW2 860 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 TDRD10Q5VZ19 366 aaKnown RBP4.91□□□□□ -1.62
CASP4-207ENST00000529565 ZNF280DQ6N043 979 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 MTHFD1LQ6UB35 978 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 LRIG3Q6UXM1 1119 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 ANO5Q75V66 913 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 PID1Q7Z2X4 250 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 ACOT1Q86TX2 421 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 EFHBQ8N7U6 833 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 TUBB6Q9BUF5 446 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 NIFKQ9BYG3 293 aaKnown RBP4.91□□□□□ -1.62
CASP4-207ENST00000529565 KCTD10Q9H3F6 313 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 KCND1Q9NSA2 647 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.91□□□□□ -1.62
CASP4-207ENST00000529565 ZNF112Q9UJU3 913 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 MAGED2Q9UNF1 606 aaPredicted RBP4.91□□□□□ -1.62
CASP4-207ENST00000529565 FARP1Q9Y4F1 1045 aaPredicted RBP4.91□□□□□ -1.62
CASP4-207ENST00000529565 NUP98P52948 1817 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 STRCQ7RTU9 1775 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 LACTBL1A8MY62 500 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 PI4K2BG5E9Z4 385 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 CES2O00748 559 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 WNT7AO00755 349 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 PRRG1O14668 218 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 ZNF185O15231 689 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 FKTNO75072 461 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 TRPA1O75762 1119 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 UPP2O95045 317 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 SMIM10L2AP0DMW4 78 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 SMIM10L2BP0DMW5 78 aa4.91□□□□□ -1.62
CASP4-207ENST00000529565 KCNA2P16389 499 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms