RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 OPHN1O60890 802 aa12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 CDKL5O76039 1030 aa12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 ALDH1A2O94788 518 aa12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 ARSAP15289 507 aa12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 CYP3A5P20815 502 aa12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 P2RY2P41231 377 aa12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 MAPK8P45983 427 aa12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 ATXN3P54252 364 aaPredicted RBP12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 C19orf57Q0VDD7 668 aa12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 SMARCB1Q12824 385 aa12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 NR1H3Q13133 447 aa12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 SLC14A1Q13336 389 aa12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 LMBRD2Q68DH5 695 aaPredicted RBP12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 OVOS1Q6IE37 1185 aa12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 RABEPKQ7Z6M1 372 aa12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 ADAM32Q8TC27 787 aa12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 USP33Q8TEY7 942 aa12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 ADAMTS14Q8WXS8 1223 aa12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 EZH1Q92800 747 aaPredicted RBP12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 TCHPQ9BT92 498 aa12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 KIFC3Q9BVG8 833 aa12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 TPSD1Q9BZJ3 242 aa12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 PLEKHA5Q9HAU0 1116 aa12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 TMEM74BQ9NUR3 256 aa12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 DKK4Q9UBT3 224 aa12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 PILRBQ9UKJ0 227 aa12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 SLC6A14Q9UN76 642 aa12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 RBM19Q9Y4C8 960 aaKnown RBP12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 TIMM13Q9Y5L4 95 aaPredicted RBP12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 TK2O00142 265 aa12.64□□□□□ -0.39
AMBRA1-207ENST00000529553 NEMFO60524 1076 aa12.64□□□□□ -0.39
AMBRA1-207ENST00000529553 MED24O75448 989 aa12.64□□□□□ -0.39
AMBRA1-207ENST00000529553 LARGE1O95461 756 aa12.64□□□□□ -0.39
AMBRA1-207ENST00000529553 RPA1P27694 616 aa12.64□□□□□ -0.39
AMBRA1-207ENST00000529553 GFPT1Q06210 699 aaPredicted RBP12.64□□□□□ -0.39
AMBRA1-207ENST00000529553 TOB2Q14106 344 aaPredicted RBP12.64□□□□□ -0.39
AMBRA1-207ENST00000529553 ZBTB6Q15916 424 aa12.64□□□□□ -0.39
AMBRA1-207ENST00000529553 TAF12Q16514 161 aa12.64□□□□□ -0.39
AMBRA1-207ENST00000529553 CRY1Q16526 586 aa12.64□□□□□ -0.39
AMBRA1-207ENST00000529553 DUOXA1Q1HG43 343 aa12.64□□□□□ -0.39
AMBRA1-207ENST00000529553 SLC10A6Q3KNW5 377 aa12.64□□□□□ -0.39
AMBRA1-207ENST00000529553 MPZL3Q6UWV2 235 aa12.64□□□□□ -0.39
AMBRA1-207ENST00000529553 DSTYKQ6XUX3 929 aa12.64□□□□□ -0.39
AMBRA1-207ENST00000529553 RUFY3Q7L099 469 aa12.64□□□□□ -0.39
AMBRA1-207ENST00000529553 MON1AQ86VX9 555 aa12.64□□□□□ -0.39
AMBRA1-207ENST00000529553 C2orf15Q8WU43 125 aaKnown RBP12.64□□□□□ -0.39
AMBRA1-207ENST00000529553 OSCP1Q8WVF1 389 aa12.64□□□□□ -0.39
AMBRA1-207ENST00000529553 HNRNPLLQ8WVV9 542 aaKnown RBP12.64□□□□□ -0.39
AMBRA1-207ENST00000529553 ATP2A3Q93084 1043 aa12.64□□□□□ -0.39
AMBRA1-207ENST00000529553 SPACA7Q96KW9 195 aa12.64□□□□□ -0.39
AMBRA1-207ENST00000529553 TSPAN18Q96SJ8 248 aa12.64□□□□□ -0.39
AMBRA1-207ENST00000529553 MBD1Q9UIS9 605 aaPredicted RBP12.64□□□□□ -0.39
AMBRA1-207ENST00000529553 MMP17Q9ULZ9 603 aa12.64□□□□□ -0.39
AMBRA1-207ENST00000529553 CCL26Q9Y258 94 aa12.64□□□□□ -0.39
AMBRA1-207ENST00000529553 EML5Q05BV3 1969 aa12.63□□□□□ -0.39
AMBRA1-207ENST00000529553 ABLIM1O14639 778 aa12.63□□□□□ -0.39
AMBRA1-207ENST00000529553 SOAT2O75908 522 aa12.63□□□□□ -0.39
AMBRA1-207ENST00000529553 F11P03951 625 aa12.63□□□□□ -0.39
AMBRA1-207ENST00000529553 SERPINF2P08697 491 aa12.63□□□□□ -0.39
AMBRA1-207ENST00000529553 CD59P13987 128 aa12.63□□□□□ -0.39
AMBRA1-207ENST00000529553 FAM193AP78312 1265 aa12.63□□□□□ -0.39
AMBRA1-207ENST00000529553 MRPS21P82921 87 aaKnown RBP12.63□□□□□ -0.39
AMBRA1-207ENST00000529553 PSMD2Q13200 908 aa12.63□□□□□ -0.39
AMBRA1-207ENST00000529553 TRIP6Q15654 476 aaKnown RBP12.63□□□□□ -0.39
AMBRA1-207ENST00000529553 ANO7Q6IWH7 933 aa12.63□□□□□ -0.39
AMBRA1-207ENST00000529553 TTC9BQ8N6N2 239 aa12.63□□□□□ -0.39
AMBRA1-207ENST00000529553 MAB21L3Q8N8X9 362 aa12.63□□□□□ -0.39
AMBRA1-207ENST00000529553 MDGA1Q8NFP4 955 aa12.63□□□□□ -0.39
AMBRA1-207ENST00000529553 ERMNQ8TAM6 284 aa12.63□□□□□ -0.39
AMBRA1-207ENST00000529553 TNFRSF25Q93038 417 aa12.63□□□□□ -0.39
AMBRA1-207ENST00000529553 LRIG1Q96JA1 1093 aa12.63□□□□□ -0.39
AMBRA1-207ENST00000529553 FNBP1Q96RU3 617 aa12.63□□□□□ -0.39
AMBRA1-207ENST00000529553 LPIN3Q9BQK8 851 aa12.63□□□□□ -0.39
AMBRA1-207ENST00000529553 TARS2Q9BW92 718 aaKnown RBP12.63□□□□□ -0.39
AMBRA1-207ENST00000529553 BRMS1Q9HCU9 246 aa12.63□□□□□ -0.39
AMBRA1-207ENST00000529553 DNAAF2Q9NVR5 837 aaKnown RBP12.63□□□□□ -0.39
AMBRA1-207ENST00000529553 ASCC3Q8N3C0 2202 aaKnown RBP12.63□□□□□ -0.39
AMBRA1-207ENST00000529553 STK36Q9NRP7 1315 aa12.62□□□□□ -0.39
AMBRA1-207ENST00000529553 NUP210Q8TEM1 1887 aaPredicted RBP12.62□□□□□ -0.39
AMBRA1-207ENST00000529553 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.62□□□□□ -0.39
AMBRA1-207ENST00000529553 CCDC169A6NNP5 214 aa12.62□□□□□ -0.39
AMBRA1-207ENST00000529553 K7EQS6 105 aa12.62□□□□□ -0.39
AMBRA1-207ENST00000529553 ATF6P18850 670 aa12.62□□□□□ -0.39
AMBRA1-207ENST00000529553 U2AF2P26368 475 aaKnown RBP eCLIP12.62□□□□□ -0.39
AMBRA1-207ENST00000529553 PTGER3P43115 390 aa12.62□□□□□ -0.39
AMBRA1-207ENST00000529553 NPTX2P47972 431 aa12.62□□□□□ -0.39
AMBRA1-207ENST00000529553 NLRP12P59046 1061 aa12.62□□□□□ -0.39
AMBRA1-207ENST00000529553 MGAT5BQ3V5L5 792 aa12.62□□□□□ -0.39
AMBRA1-207ENST00000529553 HSF5Q4G112 596 aaPredicted RBP12.62□□□□□ -0.39
AMBRA1-207ENST00000529553 LYSMD4Q5XG99 296 aa12.62□□□□□ -0.39
AMBRA1-207ENST00000529553 NAIF1Q69YI7 327 aaPredicted RBP12.62□□□□□ -0.39
AMBRA1-207ENST00000529553 TMEM150AQ86TG1 271 aa12.62□□□□□ -0.39
AMBRA1-207ENST00000529553 TMEFF1Q8IYR6 380 aa12.62□□□□□ -0.39
AMBRA1-207ENST00000529553 SEPT5Q99719 369 aaPredicted RBP12.62□□□□□ -0.39
AMBRA1-207ENST00000529553 CAPN10Q9HC96 672 aa12.62□□□□□ -0.39
AMBRA1-207ENST00000529553 ZSWIM6Q9HCJ5 1215 aa12.62□□□□□ -0.39
AMBRA1-207ENST00000529553 DUS2Q9NX74 493 aaKnown RBP12.62□□□□□ -0.39
AMBRA1-207ENST00000529553 ARHGAP28Q9P2N2 729 aa12.62□□□□□ -0.39
AMBRA1-207ENST00000529553 TUBGCP4Q9UGJ1 667 aa12.62□□□□□ -0.39
AMBRA1-207ENST00000529553 KCNG1Q9UIX4 513 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms