RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 AP1G1O43747 822 aa6□□□□□ -1.45
CSDE1-212ENST00000529046 RPS6KA4O75676 772 aa6□□□□□ -1.45
CSDE1-212ENST00000529046 SNRPA1P09661 255 aaKnown RBP6□□□□□ -1.45
CSDE1-212ENST00000529046 PTPN7P35236 360 aa6□□□□□ -1.45
CSDE1-212ENST00000529046 PER3P56645 1201 aa6□□□□□ -1.45
CSDE1-212ENST00000529046 THEMIS2Q5TEJ8 643 aa6□□□□□ -1.45
CSDE1-212ENST00000529046 ANKS6Q68DC2 871 aa6□□□□□ -1.45
CSDE1-212ENST00000529046 DRC7Q8IY82 874 aa6□□□□□ -1.45
CSDE1-212ENST00000529046 CCHCR1Q8TD31 782 aa6□□□□□ -1.45
CSDE1-212ENST00000529046 UHRF1Q96T88 793 aaPredicted RBP6□□□□□ -1.45
CSDE1-212ENST00000529046 SLITRK6Q9H5Y7 841 aa6□□□□□ -1.45
CSDE1-212ENST00000529046 SPON1Q9HCB6 807 aa6□□□□□ -1.45
CSDE1-212ENST00000529046 GEMIN8Q9NWZ8 242 aaKnown RBP6□□□□□ -1.45
CSDE1-212ENST00000529046 GABBR1Q9UBS5 961 aa6□□□□□ -1.45
CSDE1-212ENST00000529046 CLCA2Q9UQC9 943 aa6□□□□□ -1.45
CSDE1-212ENST00000529046 HDAC5Q9UQL6 1122 aa6□□□□□ -1.45
CSDE1-212ENST00000529046 POLHQ9Y253 713 aa6□□□□□ -1.45
CSDE1-212ENST00000529046 ACTL7AQ9Y615 435 aa6□□□□□ -1.45
CSDE1-212ENST00000529046 KTN1Q86UP2 1357 aaKnown RBP6□□□□□ -1.45
CSDE1-212ENST00000529046 PIK3C2AO00443 1686 aa6□□□□□ -1.45
CSDE1-212ENST00000529046 NFAT5O94916 1531 aa5.99□□□□□ -1.45
CSDE1-212ENST00000529046 USP54Q70EL1 1684 aa5.99□□□□□ -1.45
CSDE1-212ENST00000529046 CD163L1Q9NR16 1453 aa5.99□□□□□ -1.45
CSDE1-212ENST00000529046 ARIH2O95376 493 aa5.99□□□□□ -1.45
CSDE1-212ENST00000529046 ALDH2P05091 517 aa5.99□□□□□ -1.45
CSDE1-212ENST00000529046 PTGS2P35354 604 aa5.99□□□□□ -1.45
CSDE1-212ENST00000529046 MAP2K6P52564 334 aa5.99□□□□□ -1.45
CSDE1-212ENST00000529046 CLRN1P58418 232 aa5.99□□□□□ -1.45
CSDE1-212ENST00000529046 GFOD2Q3B7J2 385 aa5.99□□□□□ -1.45
CSDE1-212ENST00000529046 CHST15Q7LFX5 561 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-212ENST00000529046 ZNF276Q8N554 614 aa5.99□□□□□ -1.45
CSDE1-212ENST00000529046 SLC25A43Q8WUT9 341 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-212ENST00000529046 LARP4BQ92615 738 aaKnown RBP5.99□□□□□ -1.45
CSDE1-212ENST00000529046 CLPTM1LQ96KA5 538 aa5.99□□□□□ -1.45
CSDE1-212ENST00000529046 FAM193BQ96PV7 902 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-212ENST00000529046 ACO2Q99798 780 aaKnown RBP5.99□□□□□ -1.45
CSDE1-212ENST00000529046 LDAHQ9H6V9 325 aa5.99□□□□□ -1.45
CSDE1-212ENST00000529046 NRDE2Q9H7Z3 1164 aa5.99□□□□□ -1.45
CSDE1-212ENST00000529046 TERF2IPQ9NYB0 399 aa5.99□□□□□ -1.45
CSDE1-212ENST00000529046 GPRC5BQ9NZH0 403 aa5.99□□□□□ -1.45
CSDE1-212ENST00000529046 SORCS3Q9UPU3 1222 aa5.99□□□□□ -1.45
CSDE1-212ENST00000529046 EDC4Q6P2E9 1401 aaKnown RBP5.99□□□□□ -1.45
CSDE1-212ENST00000529046 WDR33Q9C0J8 1336 aaKnown RBP5.99□□□□□ -1.45
CSDE1-212ENST00000529046 AKAP12Q02952 1782 aa5.98□□□□□ -1.45
CSDE1-212ENST00000529046 GOLGA6CA6NDK9 693 aa5.98□□□□□ -1.45
CSDE1-212ENST00000529046 GOLGA6BA6NDN3 693 aa5.98□□□□□ -1.45
CSDE1-212ENST00000529046 GRXCR1A8MXD5 290 aa5.98□□□□□ -1.45
CSDE1-212ENST00000529046 TUSC2O75896 110 aa5.98□□□□□ -1.45
CSDE1-212ENST00000529046 HRGP04196 525 aa5.98□□□□□ -1.45
CSDE1-212ENST00000529046 FTH1P19P0C7X4 201 aa5.98□□□□□ -1.45
CSDE1-212ENST00000529046 GOLGA6DP0CG33 693 aa5.98□□□□□ -1.45
CSDE1-212ENST00000529046 MALP21145 153 aa5.98□□□□□ -1.45
CSDE1-212ENST00000529046 AGFG1P52594 562 aaKnown RBP5.98□□□□□ -1.45
CSDE1-212ENST00000529046 NKX6-1P78426 367 aaPredicted RBP5.98□□□□□ -1.45
CSDE1-212ENST00000529046 DPTQ07507 201 aa5.98□□□□□ -1.45
CSDE1-212ENST00000529046 NOGQ13253 232 aa5.98□□□□□ -1.45
CSDE1-212ENST00000529046 OVCH2Q7RTZ1 564 aa5.98□□□□□ -1.45
CSDE1-212ENST00000529046 C14orf80Q86SX3 495 aa5.98□□□□□ -1.45
CSDE1-212ENST00000529046 DENND1CQ8IV53 801 aa5.98□□□□□ -1.45
CSDE1-212ENST00000529046 FAM43AQ8N2R8 423 aa5.98□□□□□ -1.45
CSDE1-212ENST00000529046 C3orf20Q8ND61 904 aa5.98□□□□□ -1.45
CSDE1-212ENST00000529046 IL17RDQ8NFM7 739 aa5.98□□□□□ -1.45
CSDE1-212ENST00000529046 CPT1CQ8TCG5 803 aa5.98□□□□□ -1.45
CSDE1-212ENST00000529046 RGMAQ96B86 450 aa5.98□□□□□ -1.45
CSDE1-212ENST00000529046 CHFRQ96EP1 664 aa5.98□□□□□ -1.45
CSDE1-212ENST00000529046 FAM167AQ96KS9 214 aa5.98□□□□□ -1.45
CSDE1-212ENST00000529046 LRFN3Q9BTN0 628 aa5.98□□□□□ -1.45
CSDE1-212ENST00000529046 NDC1Q9BTX1 674 aa5.98□□□□□ -1.45
CSDE1-212ENST00000529046 MRI1Q9BV20 369 aa5.98□□□□□ -1.45
CSDE1-212ENST00000529046 TMEM60Q9H2L4 133 aa5.98□□□□□ -1.45
CSDE1-212ENST00000529046 C1orf112Q9NSG2 853 aa5.98□□□□□ -1.45
CSDE1-212ENST00000529046 SIDT1Q9NXL6 827 aaKnown RBP5.98□□□□□ -1.45
CSDE1-212ENST00000529046 GOLGA6AQ9NYA3 693 aa5.98□□□□□ -1.45
CSDE1-212ENST00000529046 NUP188Q5SRE5 1749 aa5.97□□□□□ -1.45
CSDE1-212ENST00000529046 LRRC37A3O60309 1634 aa5.97□□□□□ -1.45
CSDE1-212ENST00000529046 TRIM24O15164 1050 aa5.97□□□□□ -1.45
CSDE1-212ENST00000529046 B3GALT2O43825 422 aa5.97□□□□□ -1.45
CSDE1-212ENST00000529046 RECQL4O94761 1208 aa5.97□□□□□ -1.45
CSDE1-212ENST00000529046 HMGB2P26583 209 aaKnown RBP5.97□□□□□ -1.45
CSDE1-212ENST00000529046 INHBCP55103 352 aa5.97□□□□□ -1.45
CSDE1-212ENST00000529046 SNAPC2Q13487 334 aa5.97□□□□□ -1.45
CSDE1-212ENST00000529046 GALEQ14376 348 aa5.97□□□□□ -1.45
CSDE1-212ENST00000529046 CCDC181Q5TID7 509 aa5.97□□□□□ -1.45
CSDE1-212ENST00000529046 METRNLQ641Q3 311 aa5.97□□□□□ -1.45
CSDE1-212ENST00000529046 XYLT1Q86Y38 959 aa5.97□□□□□ -1.45
CSDE1-212ENST00000529046 GRAMD1CQ8IYS0 662 aa5.97□□□□□ -1.45
CSDE1-212ENST00000529046 KIAA0319LQ8IZA0 1049 aa5.97□□□□□ -1.45
CSDE1-212ENST00000529046 SYNE4Q8N205 404 aa5.97□□□□□ -1.45
CSDE1-212ENST00000529046 FBXO18Q8NFZ0 1043 aa5.97□□□□□ -1.45
CSDE1-212ENST00000529046 STON2Q8WXE9 905 aa5.97□□□□□ -1.45
CSDE1-212ENST00000529046 IP6K1Q92551 441 aa5.97□□□□□ -1.45
CSDE1-212ENST00000529046 HAS1Q92839 578 aa5.97□□□□□ -1.45
CSDE1-212ENST00000529046 TMX3Q96JJ7 454 aa5.97□□□□□ -1.45
CSDE1-212ENST00000529046 TESK2Q96S53 571 aa5.97□□□□□ -1.45
CSDE1-212ENST00000529046 C11orf54Q9H0W9 315 aaPredicted RBP5.97□□□□□ -1.45
CSDE1-212ENST00000529046 KMT5AQ9NQR1 393 aa5.97□□□□□ -1.45
CSDE1-212ENST00000529046 OBP2AQ9NY56 170 aa5.97□□□□□ -1.45
CSDE1-212ENST00000529046 TNS2Q63HR2 1409 aa5.97□□□□□ -1.45
CSDE1-212ENST00000529046 A0A088AWK7 358 aa5.96□□□□□ -1.46
CSDE1-212ENST00000529046 PRR5-ARHGAP8B1AHC4 643 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms