RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 PSMC1P62191 440 aaKnown RBP26.33■■□□□ 1.81
LDLRAD3-203ENST00000528989 PALB2Q86YC2 1186 aa26.33■■□□□ 1.81
LDLRAD3-203ENST00000528989 GLYCTKQ8IVS8 523 aa26.33■■□□□ 1.81
LDLRAD3-203ENST00000528989 CCDC112Q8NEF3 446 aa26.33■■□□□ 1.81
LDLRAD3-203ENST00000528989 ZNF606Q8WXB4 792 aa26.33■■□□□ 1.81
LDLRAD3-203ENST00000528989 CLP1Q92989 425 aaKnown RBP26.33■■□□□ 1.81
LDLRAD3-203ENST00000528989 TRIM44Q96DX7 344 aaPredicted RBP26.33■■□□□ 1.81
LDLRAD3-203ENST00000528989 CCDC42Q96M95 316 aa26.33■■□□□ 1.81
LDLRAD3-203ENST00000528989 SPTLC3Q9NUV7 552 aa26.33■■□□□ 1.81
LDLRAD3-203ENST00000528989 EFEMP2O95967 443 aa26.32■■□□□ 1.8
LDLRAD3-203ENST00000528989 PAX3P23760 479 aa26.32■■□□□ 1.8
LDLRAD3-203ENST00000528989 OVOS1Q6IE37 1185 aa26.32■■□□□ 1.8
LDLRAD3-203ENST00000528989 UNC93AQ86WB7 457 aa26.32■■□□□ 1.8
LDLRAD3-203ENST00000528989 AGPAT1Q99943 283 aa26.32■■□□□ 1.8
LDLRAD3-203ENST00000528989 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.32■■□□□ 1.8
LDLRAD3-203ENST00000528989 BZW2Q9Y6E2 419 aaKnown RBP26.32■■□□□ 1.8
LDLRAD3-203ENST00000528989 THAP12O43422 761 aa26.32■■□□□ 1.8
LDLRAD3-203ENST00000528989 LHX1P48742 406 aa26.32■■□□□ 1.8
LDLRAD3-203ENST00000528989 BPIFB4P59827 614 aa26.32■■□□□ 1.8
LDLRAD3-203ENST00000528989 YWHAHQ04917 246 aaPredicted RBP26.32■■□□□ 1.8
LDLRAD3-203ENST00000528989 GFPT1Q06210 699 aaPredicted RBP26.32■■□□□ 1.8
LDLRAD3-203ENST00000528989 MAPK8IP2Q13387 824 aaPredicted RBP26.32■■□□□ 1.8
LDLRAD3-203ENST00000528989 RTP2Q5QGT7 225 aa26.32■■□□□ 1.8
LDLRAD3-203ENST00000528989 METTL23Q86XA0 190 aa26.32■■□□□ 1.8
LDLRAD3-203ENST00000528989 DNAAF5Q86Y56 855 aa26.32■■□□□ 1.8
LDLRAD3-203ENST00000528989 FMNL3Q8IVF7 1028 aa26.32■■□□□ 1.8
LDLRAD3-203ENST00000528989 TTC39CQ8N584 583 aa26.32■■□□□ 1.8
LDLRAD3-203ENST00000528989 TMEM209Q96SK2 561 aa26.32■■□□□ 1.8
LDLRAD3-203ENST00000528989 FAM124BQ9H5Z6 455 aaPredicted RBP26.32■■□□□ 1.8
LDLRAD3-203ENST00000528989 SPG21Q9NZD8 308 aa26.32■■□□□ 1.8
LDLRAD3-203ENST00000528989 PYCARDQ9ULZ3 195 aa26.32■■□□□ 1.8
LDLRAD3-203ENST00000528989 A0A087X0T9 212 aa26.31■■□□□ 1.8
LDLRAD3-203ENST00000528989 PAEPP09466 180 aa26.31■■□□□ 1.8
LDLRAD3-203ENST00000528989 FAM163BP0C2L3 166 aa26.31■■□□□ 1.8
LDLRAD3-203ENST00000528989 FAM228BP0C875 321 aa26.31■■□□□ 1.8
LDLRAD3-203ENST00000528989 TYMPP19971 482 aa26.31■■□□□ 1.8
LDLRAD3-203ENST00000528989 PBX2P40425 430 aa26.31■■□□□ 1.8
LDLRAD3-203ENST00000528989 FMO1Q01740 532 aa26.31■■□□□ 1.8
LDLRAD3-203ENST00000528989 OR10T2Q8NGX3 314 aa26.31■■□□□ 1.8
LDLRAD3-203ENST00000528989 LNX1Q8TBB1 728 aaPredicted RBP26.31■■□□□ 1.8
LDLRAD3-203ENST00000528989 PCDHB18PQ96TA0 734 aa26.31■■□□□ 1.8
LDLRAD3-203ENST00000528989 DEF6Q9H4E7 631 aa26.31■■□□□ 1.8
LDLRAD3-203ENST00000528989 FAM49BQ9NUQ9 324 aa26.31■■□□□ 1.8
LDLRAD3-203ENST00000528989 DSEQ9UL01 958 aa26.31■■□□□ 1.8
LDLRAD3-203ENST00000528989 SSU72P8A0A1W2PR75 194 aa26.3■■□□□ 1.8
LDLRAD3-203ENST00000528989 LINC01553A4QN01 128 aa26.3■■□□□ 1.8
LDLRAD3-203ENST00000528989 DDX3XO00571 662 aaKnown RBP eCLIP26.3■■□□□ 1.8
LDLRAD3-203ENST00000528989 FGFR3P22607 806 aa26.3■■□□□ 1.8
LDLRAD3-203ENST00000528989 CDR2Q01850 454 aa26.3■■□□□ 1.8
LDLRAD3-203ENST00000528989 VARS2Q5ST30 1063 aaKnown RBP26.3■■□□□ 1.8
LDLRAD3-203ENST00000528989 TOGARAM2Q6ZUX3 1019 aa26.3■■□□□ 1.8
LDLRAD3-203ENST00000528989 CRYBG2Q8N1P7 616 aa26.3■■□□□ 1.8
LDLRAD3-203ENST00000528989 TMEM169Q96HH4 297 aa26.3■■□□□ 1.8
LDLRAD3-203ENST00000528989 DESI2Q9BSY9 194 aa26.3■■□□□ 1.8
LDLRAD3-203ENST00000528989 SEPT11Q9NVA2 429 aaKnown RBP26.3■■□□□ 1.8
LDLRAD3-203ENST00000528989 ZNF263O14978 683 aa26.3■■□□□ 1.8
LDLRAD3-203ENST00000528989 ARHGAP6O43182 974 aa26.3■■□□□ 1.8
LDLRAD3-203ENST00000528989 AKR1B10O60218 316 aa26.3■■□□□ 1.8
LDLRAD3-203ENST00000528989 CA3P07451 260 aa26.3■■□□□ 1.8
LDLRAD3-203ENST00000528989 KIF11P52732 1056 aa26.3■■□□□ 1.8
LDLRAD3-203ENST00000528989 CYP27A1Q02318 531 aa26.3■■□□□ 1.8
LDLRAD3-203ENST00000528989 PCDHB12Q9Y5F1 795 aa26.3■■□□□ 1.8
LDLRAD3-203ENST00000528989 EPN1Q9Y6I3 576 aaPredicted RBP26.3■■□□□ 1.8
LDLRAD3-203ENST00000528989 SYN3O14994 580 aa26.29■■□□□ 1.8
LDLRAD3-203ENST00000528989 OAZ2O95190 189 aa26.29■■□□□ 1.8
LDLRAD3-203ENST00000528989 PASD1Q8IV76 773 aa26.29■■□□□ 1.8
LDLRAD3-203ENST00000528989 RNF168Q8IYW5 571 aaPredicted RBP26.29■■□□□ 1.8
LDLRAD3-203ENST00000528989 KLHL23Q8NBE8 558 aa26.29■■□□□ 1.8
LDLRAD3-203ENST00000528989 B3GALNT2Q8NCR0 500 aa26.29■■□□□ 1.8
LDLRAD3-203ENST00000528989 C17orf80Q9BSJ5 609 aa26.29■■□□□ 1.8
LDLRAD3-203ENST00000528989 CRTAC1Q9NQ79 661 aa26.29■■□□□ 1.8
LDLRAD3-203ENST00000528989 MTUS1Q9ULD2 1270 aa26.29■■□□□ 1.8
LDLRAD3-203ENST00000528989 YBX2Q9Y2T7 364 aaKnown RBP26.29■■□□□ 1.8
LDLRAD3-203ENST00000528989 MYBPHLA2RUH7 354 aa26.28■■□□□ 1.8
LDLRAD3-203ENST00000528989 NDUFA10O95299 355 aa26.28■■□□□ 1.8
LDLRAD3-203ENST00000528989 PTPN1P18031 435 aaKnown RBP26.28■■□□□ 1.8
LDLRAD3-203ENST00000528989 TNFAIP3P21580 790 aa26.28■■□□□ 1.8
LDLRAD3-203ENST00000528989 PPP1R26Q5T8A7 1209 aaPredicted RBP26.28■■□□□ 1.8
LDLRAD3-203ENST00000528989 LRRTM3Q86VH5 581 aa26.28■■□□□ 1.8
LDLRAD3-203ENST00000528989 SLC30A5Q8TAD4 765 aa26.28■■□□□ 1.8
LDLRAD3-203ENST00000528989 TTPALQ9BTX7 342 aa26.28■■□□□ 1.8
LDLRAD3-203ENST00000528989 AAASQ9NRG9 546 aa26.28■■□□□ 1.8
LDLRAD3-203ENST00000528989 GTF3C4Q9UKN8 822 aa26.28■■□□□ 1.8
LDLRAD3-203ENST00000528989 FGF18O76093 207 aa26.28■■□□□ 1.8
LDLRAD3-203ENST00000528989 OR4Q2P0C623 313 aa26.28■■□□□ 1.8
LDLRAD3-203ENST00000528989 VDRP11473 427 aa26.28■■□□□ 1.8
LDLRAD3-203ENST00000528989 ELAVL2Q12926 359 aaKnown RBP26.28■■□□□ 1.8
LDLRAD3-203ENST00000528989 MRPL58Q14197 206 aaKnown RBP26.28■■□□□ 1.8
LDLRAD3-203ENST00000528989 PRSS55Q6UWB4 352 aaPredicted RBP26.28■■□□□ 1.8
LDLRAD3-203ENST00000528989 CCDC170Q8IYT3 715 aa26.28■■□□□ 1.8
LDLRAD3-203ENST00000528989 SYT15Q9BQS2 421 aa26.28■■□□□ 1.8
LDLRAD3-203ENST00000528989 TAS2R14Q9NYV8 317 aa26.28■■□□□ 1.8
LDLRAD3-203ENST00000528989 PDE4DIPQ5VU43 2346 aa26.27■■□□□ 1.8
LDLRAD3-203ENST00000528989 C2CD2LO14523 706 aa26.27■■□□□ 1.8
LDLRAD3-203ENST00000528989 CCDC130P13994 396 aa26.27■■□□□ 1.8
LDLRAD3-203ENST00000528989 SGO2Q562F6 1265 aa26.27■■□□□ 1.8
LDLRAD3-203ENST00000528989 RSPO2Q6UXX9 243 aaPredicted RBP26.27■■□□□ 1.8
LDLRAD3-203ENST00000528989 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.27■■□□□ 1.8
LDLRAD3-203ENST00000528989 ACRBPQ8NEB7 543 aa26.27■■□□□ 1.8
LDLRAD3-203ENST00000528989 CYFIP2Q96F07 1278 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms