RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 ZNF518BQ9C0D4 1074 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 ENKD1Q9H0I2 346 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 MYLK2Q9H1R3 596 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 EPC1Q9H2F5 836 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 SMURF2Q9HAU4 748 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 A1CFQ9NQ94 594 aaKnown RBP3.88□□□□□ -1.79
BRCA2-203ENST00000528762 SLC2A4RGQ9NR83 387 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.88□□□□□ -1.79
BRCA2-203ENST00000528762 GJB4Q9NTQ9 266 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 MYO1AQ9UBC5 1043 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 RGS17Q9UGC6 210 aaPredicted RBP3.88□□□□□ -1.79
BRCA2-203ENST00000528762 SLC23A1Q9UHI7 598 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 GJD2Q9UKL4 321 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 REXO2Q9Y3B8 237 aaKnown RBP3.88□□□□□ -1.79
BRCA2-203ENST00000528762 UBE2QL1A1L167 161 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 PMS2P1A4D2B8 440 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 TRIM43BA6NCK2 446 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 GOLGA6L3A6NEY3 463 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 CXorf49A8MYA2 514 aaPredicted RBP3.87□□□□□ -1.79
BRCA2-203ENST00000528762 MYO1CO00159 1063 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 HOXA3O43365 443 aaPredicted RBP3.87□□□□□ -1.79
BRCA2-203ENST00000528762 SKAP2O75563 359 aaPredicted RBP3.87□□□□□ -1.79
BRCA2-203ENST00000528762 ABHD16AO95870 558 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 POMCP01189 267 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 MT-ND5P03915 603 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 CSTBP04080 98 aaKnown RBP3.87□□□□□ -1.79
BRCA2-203ENST00000528762 GNAI2P04899 355 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 ANXA2P07355 339 aaKnown RBP3.87□□□□□ -1.79
BRCA2-203ENST00000528762 HSD3B1P14060 373 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 FGFR2P21802 821 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 BDNFP23560 247 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 MCM7P33993 719 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 HGFACQ04756 655 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 RAB32Q13637 225 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 BLMHQ13867 455 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 UBXN2BQ14CS0 331 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 LMBRD2Q68DH5 695 aaPredicted RBP3.87□□□□□ -1.79
BRCA2-203ENST00000528762 ZNF529Q6P280 563 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 PCGF5Q86SE9 256 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 USP37Q86T82 979 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 PDSS2Q86YH6 399 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 CACNA2D3Q8IZS8 1091 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 SHCBP1Q8NEM2 672 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 DDX17Q92841 729 aaKnown RBP3.87□□□□□ -1.79
BRCA2-203ENST00000528762 TRIM43Q96BQ3 446 aaPredicted RBP3.87□□□□□ -1.79
BRCA2-203ENST00000528762 TBC1D20Q96BZ9 403 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 IQCDQ96DY2 449 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 GPHA2Q96T91 129 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 NDC1Q9BTX1 674 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 PACSIN1Q9BY11 444 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 EIF2AQ9BY44 585 aaKnown RBP3.87□□□□□ -1.79
BRCA2-203ENST00000528762 KCNH6Q9H252 994 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 CHST8Q9H2A9 424 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 GSTO2Q9H4Y5 243 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 RLIMQ9NVW2 624 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 C9orf78Q9NZ63 289 aaPredicted RBP3.87□□□□□ -1.79
BRCA2-203ENST00000528762 ITGB1BP2Q9UKP3 347 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 MAN2B2Q9Y2E5 1009 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 PAXBP1Q9Y5B6 917 aa3.87□□□□□ -1.79
BRCA2-203ENST00000528762 TBKBP1A7MCY6 615 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 PYCARD-AS1I3L0S3 204 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 M0R3H8 397 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 PJA2O43164 708 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 RPS6KA4O75676 772 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 ANXA1P04083 346 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 SNRPA1P09661 255 aaKnown RBP3.86□□□□□ -1.79
BRCA2-203ENST00000528762 ALAS1P13196 640 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 RPS19P39019 145 aaKnown RBP3.86□□□□□ -1.79
BRCA2-203ENST00000528762 ALDH9A1P49189 494 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 CLRN1P58418 232 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 ADAM8P78325 824 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 PPFIA1Q13136 1202 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 CRHR2Q13324 411 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 RIN1Q13671 783 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 TUBA3CQ13748 450 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 PFKFB4Q16877 469 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 UTP14CQ5TAP6 766 aaKnown RBP3.86□□□□□ -1.79
BRCA2-203ENST00000528762 CCDC70Q6NSX1 233 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 TUBA3EQ6PEY2 450 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 CATSPERGQ6ZRH7 1159 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 UNC13DQ70J99 1090 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 ZNF627Q7L945 461 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 UBE3BQ7Z3V4 1068 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 ADGRE4PQ86SQ3 457 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 MICU3Q86XE3 530 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 SLC15A4Q8N697 577 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 TEX19Q8NA77 164 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 CCDC150Q8NCX0 1101 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 SLC35B2Q8TB61 432 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 IPCEF1Q8WWN9 437 aaPredicted RBP3.86□□□□□ -1.79
BRCA2-203ENST00000528762 LARP4BQ92615 738 aaKnown RBP3.86□□□□□ -1.79
BRCA2-203ENST00000528762 MUL1Q969V5 352 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 GCC1Q96CN9 775 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 LTV1Q96GA3 475 aaPredicted RBP3.86□□□□□ -1.79
BRCA2-203ENST00000528762 NELL2Q99435 816 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 TCF25Q9BQ70 676 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 HEPHQ9BQS7 1158 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 TMEM120AQ9BXJ8 343 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 STK31Q9BXU1 1019 aa3.86□□□□□ -1.79
BRCA2-203ENST00000528762 STK33Q9BYT3 514 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms