RNA–Protein interactions for RNA: ENST00000528748.5

CDC27-206, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-206ENST00000528748 M0QZQ0 153 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 P4HA2O15460 535 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 LPXNO60711 386 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 STAU1O95793 577 aaKnown RBP11.78□□□□□ -0.52
CDC27-206ENST00000528748 HLA-DRAP01903 254 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 AFPP02771 609 aaKnown RBP11.78□□□□□ -0.52
CDC27-206ENST00000528748 SOD2P04179 222 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 FXR1P51114 621 aaKnown RBP eCLIP11.78□□□□□ -0.52
CDC27-206ENST00000528748 RAB15P59190 212 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 ERVFC1P60507 584 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 MYO1EQ12965 1108 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 NCOA4Q13772 614 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 CAMK1Q14012 370 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 MAN2A1Q16706 1144 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 SGSM1Q2NKQ1 1148 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 SV2CQ496J9 727 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 DSTYKQ6XUX3 929 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 LUZP1Q86V48 1076 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 VPS52Q8N1B4 723 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 FBXL13Q8NEE6 735 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 TAS1R2Q8TE23 839 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 TAF4BQ92750 862 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 SUSD3Q96L08 255 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 SENP8Q96LD8 212 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 ZNF560Q96MR9 790 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 LMAN2LQ9H0V9 348 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 XYLT2Q9H1B5 865 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 VRTNQ9H8Y1 702 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 CHST7Q9NS84 486 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 RAB20Q9NX57 234 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 GDAP2Q9NXN4 497 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 NXF1Q9UBU9 619 aaKnown RBP11.78□□□□□ -0.52
CDC27-206ENST00000528748 LIMA1Q9UHB6 759 aaKnown RBP11.78□□□□□ -0.52
CDC27-206ENST00000528748 SF3B1O75533 1304 aaKnown RBP eCLIP11.78□□□□□ -0.526e-6■■■■■ 80.1
CDC27-206ENST00000528748 MYO7AQ13402 2215 aa11.78□□□□□ -0.52
CDC27-206ENST00000528748 I3L4J1 428 aa11.77□□□□□ -0.53
CDC27-206ENST00000528748 CYB561D2O14569 222 aa11.77□□□□□ -0.53
CDC27-206ENST00000528748 N4BP1O75113 896 aaKnown RBP11.77□□□□□ -0.53
CDC27-206ENST00000528748 LRRN2O75325 713 aa11.77□□□□□ -0.53
CDC27-206ENST00000528748 CXCL14O95715 111 aa11.77□□□□□ -0.53
CDC27-206ENST00000528748 ASS1P00966 412 aaKnown RBP11.77□□□□□ -0.53
CDC27-206ENST00000528748 FGFR3P22607 806 aa11.77□□□□□ -0.53
CDC27-206ENST00000528748 MXI1P50539 228 aa11.77□□□□□ -0.53
CDC27-206ENST00000528748 CBLBQ13191 982 aa11.77□□□□□ -0.53
CDC27-206ENST00000528748 KRT31Q15323 416 aa11.77□□□□□ -0.53
CDC27-206ENST00000528748 USP41Q3LFD5 358 aa11.77□□□□□ -0.53
CDC27-206ENST00000528748 VWA3BQ502W6 1294 aa11.77□□□□□ -0.53
CDC27-206ENST00000528748 MIIPQ5JXC2 388 aa11.77□□□□□ -0.53
CDC27-206ENST00000528748 FAM171A1Q5VUB5 890 aa11.77□□□□□ -0.53
CDC27-206ENST00000528748 KIAA0319Q5VV43 1072 aa11.77□□□□□ -0.53
CDC27-206ENST00000528748 ANKRD20A12PQ8NF67 263 aa11.77□□□□□ -0.53
CDC27-206ENST00000528748 GDPD5Q8WTR4 605 aa11.77□□□□□ -0.53
CDC27-206ENST00000528748 SEMA4DQ92854 862 aa11.77□□□□□ -0.53
CDC27-206ENST00000528748 HERC2P3Q9BVR0 1158 aa11.77□□□□□ -0.53
CDC27-206ENST00000528748 NDST4Q9H3R1 872 aa11.77□□□□□ -0.53
CDC27-206ENST00000528748 PRDM12Q9H4Q4 367 aa11.77□□□□□ -0.53
CDC27-206ENST00000528748 LAMA3Q16787 3333 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 GOLGA6L19H0YKK7 550 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 ERVH48-1M5A8F1 160 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 FSCN2O14926 492 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 SYN3O14994 580 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 MAN1A2O60476 641 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 FAM163BP0C2L3 166 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 CTSAP10619 480 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 ATP1A3P13637 1013 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 TKTP29401 623 aaKnown RBP11.76□□□□□ -0.53
CDC27-206ENST00000528748 PIK3CAP42336 1068 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 COPB1P53618 953 aaKnown RBP11.76□□□□□ -0.53
CDC27-206ENST00000528748 DSG1Q02413 1049 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 CETN1Q12798 172 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 MRPL58Q14197 206 aaKnown RBP11.76□□□□□ -0.53
CDC27-206ENST00000528748 BMS1Q14692 1282 aaKnown RBP11.76□□□□□ -0.53
CDC27-206ENST00000528748 WDR72Q3MJ13 1102 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 PDE12Q6L8Q7 609 aaKnown RBP11.76□□□□□ -0.53
CDC27-206ENST00000528748 KIAA1841Q6NSI8 718 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.76□□□□□ -0.53
CDC27-206ENST00000528748 DPH6Q7L8W6 267 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 APTXQ7Z2E3 356 aaKnown RBP11.76□□□□□ -0.53
CDC27-206ENST00000528748 TMC7Q7Z402 723 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 LIMS2Q7Z4I7 341 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 CEP57Q86XR8 500 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 NPAS3Q8IXF0 933 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 GPR65Q8IYL9 337 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 APPL2Q8NEU8 664 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 LMO3Q8TAP4 145 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 MICAL1Q8TDZ2 1067 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 FAM161BQ96MY7 647 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 PI4K2AQ9BTU6 479 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 TTPALQ9BTX7 342 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 ZBP1Q9H171 429 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 VPS16Q9H269 839 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 NGRNQ9NPE2 291 aaKnown RBP11.76□□□□□ -0.53
CDC27-206ENST00000528748 TLR9Q9NR96 1032 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 TAB2Q9NYJ8 693 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 LMCD1Q9NZU5 365 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 SSX2IPQ9Y2D8 614 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 SNX9Q9Y5X1 595 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 VWA8A3KMH1 1905 aa11.76□□□□□ -0.53
CDC27-206ENST00000528748 ARHGEF37A1IGU5 675 aa11.75□□□□□ -0.53
CDC27-206ENST00000528748 GTPBP10A4D1E9 387 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms