RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 PFKFB4Q16877 469 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 NOMO2Q5JPE7 1267 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 METRNLQ641Q3 311 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 ZNF585AQ6P3V2 769 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 MZT2AQ6P582 158 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 FAM111BQ6SJ93 734 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 CACNA2D3Q8IZS8 1091 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 ATG16L2Q8NAA4 619 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 TMIEQ8NEW7 156 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 IL17REQ8NFR9 667 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 OR10H5Q8NGA6 315 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 Q8TCH9 128 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 TNPO1Q92973 898 aaKnown RBP3.86□□□□□ -1.79
CD44-229ENST00000528672 MUL1Q969V5 352 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 SKA1Q96BD8 255 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 NMD3Q96D46 503 aaKnown RBP3.86□□□□□ -1.79
CD44-229ENST00000528672 IQCDQ96DY2 449 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 FAM89AQ96GI7 184 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 ZSCAN31Q96LW9 406 aaPredicted RBP3.86□□□□□ -1.79
CD44-229ENST00000528672 RMDN3Q96TC7 470 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 VKORC1Q9BQB6 163 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 ZSWIM1Q9BR11 485 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 NDC1Q9BTX1 674 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 TMEM120AQ9BXJ8 343 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 STK33Q9BYT3 514 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 TRIM54Q9BYV2 358 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 KLC2Q9H0B6 622 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 EPC1Q9H2F5 836 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 CHMP4BQ9H444 224 aaKnown RBP3.86□□□□□ -1.79
CD44-229ENST00000528672 GSTO2Q9H4Y5 243 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 PLA2G3Q9NZ20 509 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 COL20A1Q9P218 1284 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 LRFN1Q9P244 771 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 SLC39A10Q9ULF5 831 aa3.86□□□□□ -1.79
CD44-229ENST00000528672 ZFR2Q9UPR6 939 aaKnown RBP3.86□□□□□ -1.79
CD44-229ENST00000528672 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.86□□□□□ -1.79
CD44-229ENST00000528672 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.86□□□□□ -1.79
CD44-229ENST00000528672 CDHR4A6H8M9 788 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 BTN3A1O00481 513 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 NRP1O14786 923 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 MUSKO15146 869 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 MATN4O95460 622 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 PYGLP06737 847 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 ANXA2P07355 339 aaKnown RBP3.85□□□□□ -1.79
CD44-229ENST00000528672 CHRM3P20309 590 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 ZFP36P26651 326 aaKnown RBP3.85□□□□□ -1.79
CD44-229ENST00000528672 CRHR1P34998 444 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 PIK3CGP48736 1102 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 FLT3LGP49771 235 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 ARFIP2P53365 341 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 NPEPPSP55786 919 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 ARL4CP56559 192 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 WNT3AP56704 352 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 RPS16P62249 146 aaKnown RBP3.85□□□□□ -1.79
CD44-229ENST00000528672 FAM189BP81408 668 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 HTRA4P83105 476 aaPredicted RBP3.85□□□□□ -1.79
CD44-229ENST00000528672 SLC13A2Q13183 592 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 CNGB1Q14028 1251 aaPredicted RBP3.85□□□□□ -1.79
CD44-229ENST00000528672 PUM1Q14671 1186 aaKnown RBP eCLIP3.85□□□□□ -1.79
CD44-229ENST00000528672 ELAVL1Q15717 326 aaKnown RBP3.85□□□□□ -1.79
CD44-229ENST00000528672 TAF12Q16514 161 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 ATP2B3Q16720 1220 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 SLC44A4Q53GD3 710 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 CRB2Q5IJ48 1285 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 FKBP15Q5T1M5 1219 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 CYP26C1Q6V0L0 522 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 ZNF783Q6ZMS7 281 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 RNF44Q7L0R7 432 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 MAATS1Q7Z4T9 603 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 FAM90A1Q86YD7 464 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 PLXDC1Q8IUK5 500 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 NAXEQ8NCW5 288 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 GIMAP8Q8ND71 665 aaPredicted RBP3.85□□□□□ -1.79
CD44-229ENST00000528672 MAML1Q92585 1016 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 SNX22Q96L94 193 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 GPR20Q99678 358 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 TCF25Q9BQ70 676 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 HEPHQ9BQS7 1158 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 CPPED1Q9BRF8 314 aaPredicted RBP3.85□□□□□ -1.79
CD44-229ENST00000528672 EIF2AQ9BY44 585 aaKnown RBP3.85□□□□□ -1.79
CD44-229ENST00000528672 MAGEH1Q9H213 219 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 OBP2BQ9NPH6 170 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 ITM2CQ9NQX7 267 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 SIDT1Q9NXL6 827 aaKnown RBP3.85□□□□□ -1.79
CD44-229ENST00000528672 DACT1Q9NYF0 836 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 GRHPRQ9UBQ7 328 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 SRRDQ9UH36 339 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 MAN2B2Q9Y2E5 1009 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 MAP3K2Q9Y2U5 619 aa3.85□□□□□ -1.79
CD44-229ENST00000528672 TRIM43BA6NCK2 446 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 CLGNO14967 610 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 NCAM2O15394 837 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 CYP27B1O15528 508 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 IRAK2O43187 625 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 TEX33O43247 280 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 SUV39H1O43463 412 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 VPS4BO75351 444 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 AGFG2O95081 481 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 MT-ND5P03915 603 aa3.84□□□□□ -1.79
CD44-229ENST00000528672 GNAI3P08754 354 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms