RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 NDUFV1P49821 464 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 ZNF132P52740 706 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 JAM2P57087 298 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 SLC8A3P57103 927 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 TSPY1Q01534 308 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 GPR17Q13304 367 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 RAB33AQ14088 237 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 SMC1AQ14683 1233 aaKnown RBP6.63□□□□□ -1.35
MACF1-228ENST00000528611 CFAP221Q4G0U5 840 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 HSP90AA4PQ58FG1 418 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 FAM171A1Q5VUB5 890 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 KIAA0319Q5VV43 1072 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 PPP2R2DQ66LE6 453 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 LMBRD2Q68DH5 695 aaPredicted RBP6.63□□□□□ -1.35
MACF1-228ENST00000528611 ARHGAP17Q68EM7 881 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 OVOS1Q6IE37 1185 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 KIAA1841Q6NSI8 718 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 FAM171BQ6P995 826 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 ADGRD1Q6QNK2 874 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 VSTM1Q6UX27 236 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 TRIM72Q6ZMU5 477 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 C4orf50Q6ZRC1 276 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 VPS36Q86VN1 386 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 ADGRF2Q8IZF7 708 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 PDCL2Q8N4E4 241 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 MRPL43Q8N983 215 aaKnown RBP6.63□□□□□ -1.35
MACF1-228ENST00000528611 KLHL23Q8NBE8 558 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 C3orf58Q8NDZ4 430 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 ZNF461Q8TAF7 563 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 MYCBPAPQ8TBZ2 947 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 SPPL3Q8TCT6 385 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 SPPL2BQ8TCT7 592 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 STK32AQ8WU08 396 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 TIFAQ96CG3 184 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 TMEM176AQ96HP8 235 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 PDLIM2Q96JY6 352 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 CALR3Q96L12 384 aaKnown RBP6.63□□□□□ -1.35
MACF1-228ENST00000528611 PCMTD1Q96MG8 357 aaPredicted RBP6.63□□□□□ -1.35
MACF1-228ENST00000528611 PANX2Q96RD6 677 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 DNAJC7Q99615 494 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 EMILIN2Q9BXX0 1053 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 ZBP1Q9H171 429 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 LHX5Q9H2C1 402 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 SNX25Q9H3E2 840 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 APOBEC3GQ9HC16 384 aaKnown RBP6.63□□□□□ -1.35
MACF1-228ENST00000528611 TLR9Q9NR96 1032 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 CISHQ9NSE2 258 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 COMMD8Q9NX08 183 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 MTRRQ9UBK8 725 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 PCDHGC3Q9UN70 934 aa6.63□□□□□ -1.35
MACF1-228ENST00000528611 SCN1AP35498 2009 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 ATP8B3O60423 1300 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 SOBPA7XYQ1 873 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 A8MXQ7 604 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 AKR1B15C9JRZ8 316 aaPredicted RBP6.62□□□□□ -1.35
MACF1-228ENST00000528611 TK2O00142 265 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 ARHGAP33O14559 1287 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 RIOK3O14730 519 aaKnown RBP6.62□□□□□ -1.35
MACF1-228ENST00000528611 FSCN2O14926 492 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 SPTLC1O15269 473 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 ABLIM3O94929 683 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 LSM8O95777 96 aaKnown RBP6.62□□□□□ -1.35
MACF1-228ENST00000528611 GYPCP04921 128 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 SETSIPP0DME0 302 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 GZMAP12544 262 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 ATF2P15336 505 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 FECHP22830 423 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 HOXA9P31269 272 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 CTNNB1P35222 781 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 TUFMP49411 452 aaKnown RBP6.62□□□□□ -1.35
MACF1-228ENST00000528611 POLR2FP61218 127 aaKnown RBP6.62□□□□□ -1.35
MACF1-228ENST00000528611 PLCB2Q00722 1185 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 DRAP1Q14919 205 aaPredicted RBP6.62□□□□□ -1.35
MACF1-228ENST00000528611 CNGA2Q16280 664 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 PAN2Q504Q3 1202 aaKnown RBP6.62□□□□□ -1.35
MACF1-228ENST00000528611 INTS6LQ5JSJ4 861 aaKnown RBP6.62□□□□□ -1.35
MACF1-228ENST00000528611 C10orf76Q5T2E6 689 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 SFMBT2Q5VUG0 894 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 IQCEQ6IPM2 695 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 CCDC170Q8IYT3 715 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 VPS52Q8N1B4 723 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 SCML4Q8N228 414 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 TXLNBQ8N3L3 684 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 CCDC112Q8NEF3 446 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 OR6B3Q8NGW1 331 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 LNX1Q8TBB1 728 aaPredicted RBP6.62□□□□□ -1.35
MACF1-228ENST00000528611 KBTBD7Q8WVZ9 684 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 BAP1Q92560 729 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 TATDN2Q93075 761 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 VCPIP1Q96JH7 1222 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 HNRNPABQ99729 332 aaKnown RBP6.62□□□□□ -1.35
MACF1-228ENST00000528611 PAAF1Q9BRP4 392 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 CRACR2AQ9BSW2 395 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 LSM14BQ9BX40 385 aaKnown RBP6.62□□□□□ -1.35
MACF1-228ENST00000528611 GPR62Q9BZJ7 368 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 ZCWPW1Q9H0M4 648 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 CXCL16Q9H2A7 254 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 PLEKHA4Q9H4M7 779 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 GOLGA2P5Q9HBQ8 144 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 FAM207AQ9NSI2 230 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms