RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 LACRTQ9GZZ8 138 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 L2HGDHQ9H9P8 463 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 GOLGA2P5Q9HBQ8 144 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 FAM207AQ9NSI2 230 aaPredicted RBP8.38□□□□□ -1.07
SORL1-207ENST00000528339 COMMD8Q9NX08 183 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 SZT2Q5T011 3432 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 PNMA6AP0CW24 399 aaPredicted RBP8.38□□□□□ -1.07
SORL1-207ENST00000528339 CSF2RAP15509 400 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 SLC11A1P49279 550 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 SCNN1GP51170 649 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 CFAP221Q4G0U5 840 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 DCAF17Q5H9S7 520 aaPredicted RBP8.38□□□□□ -1.07
SORL1-207ENST00000528339 SFMBT2Q5VUG0 894 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 C11orf63Q6NUN7 778 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 ZSCAN30Q86W11 494 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 VSIG1Q86XK7 387 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 ARFGAP1Q8N6T3 406 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 COLGALT1Q8NBJ5 622 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 FNIP1Q8TF40 1166 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 SLC2A13Q96QE2 648 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 MYO1AQ9UBC5 1043 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 MTRRQ9UBK8 725 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 TTC7AQ9ULT0 858 aaPredicted RBP8.38□□□□□ -1.07
SORL1-207ENST00000528339 PPP2R2CQ9Y2T4 447 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 MIA3Q5JRA6 1907 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 ZNF487B1APH4 448 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 CTSHP09668 335 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 SETSIPP0DME0 302 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 PRLRP16471 622 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 PIK3CAP42336 1068 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 PAPD7Q5XG87 772 aaKnown RBP8.38□□□□□ -1.07
SORL1-207ENST00000528339 ACAD10Q6JQN1 1059 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 OLFML1Q6UWY5 402 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 RTL10Q7L3V2 364 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 FUKQ8N0W3 1084 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 ANKRD20A12PQ8NF67 263 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 KIF12Q96FN5 646 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 TMEM176AQ96HP8 235 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 SPATA17Q96L03 361 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 ZNF560Q96MR9 790 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 SLC9A7Q96T83 725 aa8.38□□□□□ -1.07
SORL1-207ENST00000528339 MRPL9Q9BYD2 267 aaKnown RBP8.38□□□□□ -1.07
SORL1-207ENST00000528339 UBE2TQ9NPD8 197 aaPredicted RBP8.38□□□□□ -1.07
SORL1-207ENST00000528339 XIRP2A4UGR9 3374 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 WEE1P30291 646 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 EIF4A3P38919 411 aaKnown RBP8.37□□□□□ -1.07
SORL1-207ENST00000528339 PPIGQ13427 754 aaKnown RBP eCLIP8.37□□□□□ -1.07
SORL1-207ENST00000528339 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.37□□□□□ -1.07
SORL1-207ENST00000528339 LRRTM3Q86VH5 581 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 LRRC43Q8N309 656 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 RNF10Q8N5U6 811 aaKnown RBP8.37□□□□□ -1.07
SORL1-207ENST00000528339 ZNF606Q8WXB4 792 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 PIK3R5Q8WYR1 880 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 BICD1Q96G01 975 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 PPP1R16BQ96T49 567 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 PLVAPQ9BX97 442 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 TMLHEQ9NVH6 421 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 CALCOCO1Q9P1Z2 691 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 MRPL42Q9Y6G3 142 aaKnown RBP8.37□□□□□ -1.07
SORL1-207ENST00000528339 EPN1Q9Y6I3 576 aaPredicted RBP8.37□□□□□ -1.07
SORL1-207ENST00000528339 PQBP1O60828 265 aaKnown RBP8.37□□□□□ -1.07
SORL1-207ENST00000528339 FYNP06241 537 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 MMEP08473 750 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 VDRP11473 427 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 TAF6P49848 677 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 GATMP50440 423 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 CACNA2D1P54289 1103 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 ZNF699Q32M78 642 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 TPRNQ4KMQ1 711 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 PPP1R2P3Q6NXS1 205 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 TMEM184AQ6ZMB5 413 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 RBBP8NLQ8NC74 664 aaPredicted RBP8.37□□□□□ -1.07
SORL1-207ENST00000528339 HES6Q96HZ4 224 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.37□□□□□ -1.078e-7■■■□□ 18.6
SORL1-207ENST00000528339 B3GNT5Q9BYG0 378 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 DPEP3Q9H4B8 488 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 HCSTQ9UBK5 93 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 PLXND1Q9Y4D7 1925 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 NRP1O14786 923 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 DDX3YO15523 660 aaKnown RBP8.37□□□□□ -1.07
SORL1-207ENST00000528339 RTN2O75298 545 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 TNNC2P02585 160 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 LMO2P25791 158 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 XYLT1Q86Y38 959 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 MCOLN2Q8IZK6 566 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 RASGEF1CQ8N431 466 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 RDH13Q8NBN7 331 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 C2orf15Q8WU43 125 aaKnown RBP8.37□□□□□ -1.07
SORL1-207ENST00000528339 TSC1Q92574 1164 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 CRACR2AQ9BSW2 395 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 CDH9Q9ULB4 789 aa8.37□□□□□ -1.07
SORL1-207ENST00000528339 ARHGEF37A1IGU5 675 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 IGLV3-27P01718 113 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 TUBB4AP04350 444 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 CTNNA2P26232 953 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 PEX5P50542 639 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 EPHA5P54756 1037 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 STILQ15468 1287 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 PSRC1Q6PGN9 363 aaPredicted RBP8.36□□□□□ -1.07
SORL1-207ENST00000528339 RRAGAQ7L523 313 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms