RNA–Protein interactions for RNA: ENST00000528320.5

PUF60-212, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-212ENST00000528320 BORCS6Q96GS4 357 aa16.34■□□□□ 0.21
PUF60-212ENST00000528320 CEP63Q96MT8 703 aa16.34■□□□□ 0.21
PUF60-212ENST00000528320 NOTCH4Q99466 2003 aa16.34■□□□□ 0.21
PUF60-212ENST00000528320 CACNA1IQ9P0X4 2223 aa16.33■□□□□ 0.2
PUF60-212ENST00000528320 PPEF2O14830 753 aa16.33■□□□□ 0.2
PUF60-212ENST00000528320 DCNP07585 359 aaKnown RBP16.33■□□□□ 0.2
PUF60-212ENST00000528320 NFICP08651 508 aa16.33■□□□□ 0.2
PUF60-212ENST00000528320 GUCY2FP51841 1108 aa16.33■□□□□ 0.2
PUF60-212ENST00000528320 STARD6P59095 220 aa16.33■□□□□ 0.2
PUF60-212ENST00000528320 LILRA4P59901 499 aa16.33■□□□□ 0.2
PUF60-212ENST00000528320 NR1I3Q14994 352 aa16.33■□□□□ 0.2
PUF60-212ENST00000528320 NFIL3Q16649 462 aa16.33■□□□□ 0.2
PUF60-212ENST00000528320 TCP11X2Q5H9J9 407 aa16.33■□□□□ 0.2
PUF60-212ENST00000528320 JADE1Q6IE81 842 aa16.33■□□□□ 0.2
PUF60-212ENST00000528320 GRASPQ7Z6J2 395 aaPredicted RBP16.33■□□□□ 0.2
PUF60-212ENST00000528320 C1orf210Q8IVY1 113 aa16.33■□□□□ 0.2
PUF60-212ENST00000528320 CSGALNACT2Q8N6G5 542 aa16.33■□□□□ 0.2
PUF60-212ENST00000528320 CCDC112Q8NEF3 446 aa16.33■□□□□ 0.2
PUF60-212ENST00000528320 BEST2Q8NFU1 509 aa16.33■□□□□ 0.2
PUF60-212ENST00000528320 ZNF461Q8TAF7 563 aa16.33■□□□□ 0.2
PUF60-212ENST00000528320 HPS3Q969F9 1004 aa16.33■□□□□ 0.2
PUF60-212ENST00000528320 SHDQ96IW2 340 aa16.33■□□□□ 0.2
PUF60-212ENST00000528320 SAMSN1Q9NSI8 373 aaKnown RBP16.33■□□□□ 0.2
PUF60-212ENST00000528320 CDH7Q9ULB5 785 aa16.33■□□□□ 0.2
PUF60-212ENST00000528320 PCDHB8Q9UN66 801 aa16.33■□□□□ 0.2
PUF60-212ENST00000528320 CDY1Q9Y6F8 540 aa16.33■□□□□ 0.2
PUF60-212ENST00000528320 ARHGEF37A1IGU5 675 aa16.32■□□□□ 0.2
PUF60-212ENST00000528320 KCNJ18B7U540 433 aa16.32■□□□□ 0.2
PUF60-212ENST00000528320 SPTLC1O15269 473 aa16.32■□□□□ 0.2
PUF60-212ENST00000528320 TGFB1I1O43294 461 aa16.32■□□□□ 0.2
PUF60-212ENST00000528320 ZNF500O60304 480 aaPredicted RBP16.32■□□□□ 0.2
PUF60-212ENST00000528320 PRPF6O94906 941 aaKnown RBP16.32■□□□□ 0.2
PUF60-212ENST00000528320 GCNT3O95395 438 aa16.32■□□□□ 0.2
PUF60-212ENST00000528320 PAX3P23760 479 aa16.32■□□□□ 0.2
PUF60-212ENST00000528320 SCN1AP35498 2009 aa16.32■□□□□ 0.2
PUF60-212ENST00000528320 MATR3P43243 847 aaKnown RBP eCLIP16.32■□□□□ 0.2
PUF60-212ENST00000528320 STX17P56962 302 aa16.32■□□□□ 0.2
PUF60-212ENST00000528320 FKBP3Q00688 224 aaKnown RBP16.32■□□□□ 0.2
PUF60-212ENST00000528320 ROR1Q01973 937 aa16.32■□□□□ 0.2
PUF60-212ENST00000528320 KCNJ12Q14500 433 aa16.32■□□□□ 0.2
PUF60-212ENST00000528320 OTOGLQ3ZCN5 2332 aa16.32■□□□□ 0.2
PUF60-212ENST00000528320 LIN9Q5TKA1 542 aa16.32■□□□□ 0.2
PUF60-212ENST00000528320 C9orf57Q5W0N0 161 aa16.32■□□□□ 0.2
PUF60-212ENST00000528320 SPECC1LQ69YQ0 1117 aa16.32■□□□□ 0.2
PUF60-212ENST00000528320 ZC3H14Q6PJT7 736 aaKnown RBP16.32■□□□□ 0.2
PUF60-212ENST00000528320 APTXQ7Z2E3 356 aaKnown RBP16.32■□□□□ 0.2
PUF60-212ENST00000528320 NT5DC4Q86YG4 428 aa16.32■□□□□ 0.2
PUF60-212ENST00000528320 ZC3H3Q8IXZ2 948 aaKnown RBP16.32■□□□□ 0.2
PUF60-212ENST00000528320 EFCAB13Q8IY85 973 aa16.32■□□□□ 0.2
PUF60-212ENST00000528320 TMEM174Q8WUU8 243 aa16.32■□□□□ 0.2
PUF60-212ENST00000528320 CBWD1Q9BRT8 395 aa16.32■□□□□ 0.2
PUF60-212ENST00000528320 RPP25Q9BUL9 199 aaKnown RBP16.32■□□□□ 0.2
PUF60-212ENST00000528320 TMEM206Q9H813 350 aa16.32■□□□□ 0.2
PUF60-212ENST00000528320 SLC39A2Q9NP94 309 aa16.32■□□□□ 0.2
PUF60-212ENST00000528320 RTN4Q9NQC3 1192 aaKnown RBP16.32■□□□□ 0.2
PUF60-212ENST00000528320 CGNQ9P2M7 1197 aaKnown RBP16.32■□□□□ 0.2
PUF60-212ENST00000528320 FBXL5Q9UKA1 691 aa16.32■□□□□ 0.2
PUF60-212ENST00000528320 EXOC7Q9UPT5 735 aa16.32■□□□□ 0.2
PUF60-212ENST00000528320 R4GN57 208 aa16.32■□□□□ 0.2
PUF60-212ENST00000528320 A0A1W2PQC6 194 aa16.31■□□□□ 0.2
PUF60-212ENST00000528320 WDR27A2RRH5 827 aa16.31■□□□□ 0.2
PUF60-212ENST00000528320 PDXKO00764 312 aa16.31■□□□□ 0.2
PUF60-212ENST00000528320 VNN2O95498 520 aa16.31■□□□□ 0.2
PUF60-212ENST00000528320 C8AP07357 584 aa16.31■□□□□ 0.2
PUF60-212ENST00000528320 SP9P0CG40 484 aa16.31■□□□□ 0.2
PUF60-212ENST00000528320 MARSP56192 900 aaKnown RBP16.31■□□□□ 0.2
PUF60-212ENST00000528320 SNRPFP62306 86 aaKnown RBP16.31■□□□□ 0.2
PUF60-212ENST00000528320 GPC5P78333 572 aa16.31■□□□□ 0.2
PUF60-212ENST00000528320 ZCWPW2Q504Y3 356 aa16.31■□□□□ 0.2
PUF60-212ENST00000528320 PPM1LQ5SGD2 360 aa16.31■□□□□ 0.2
PUF60-212ENST00000528320 PARM1Q6UWI2 310 aa16.31■□□□□ 0.2
PUF60-212ENST00000528320 CCDC186Q7Z3E2 898 aa16.31■□□□□ 0.2
PUF60-212ENST00000528320 BRSK2Q8IWQ3 736 aa16.31■□□□□ 0.2
PUF60-212ENST00000528320 TCEAL8Q8IYN2 117 aa16.31■□□□□ 0.2
PUF60-212ENST00000528320 PJA1Q8NG27 643 aa16.31■□□□□ 0.2
PUF60-212ENST00000528320 GOLGA5Q8TBA6 731 aa16.31■□□□□ 0.2
PUF60-212ENST00000528320 SCFD1Q8WVM8 642 aa16.31■□□□□ 0.2
PUF60-212ENST00000528320 POMGNT1Q8WZA1 660 aa16.31■□□□□ 0.2
PUF60-212ENST00000528320 FGF14Q92915 247 aa16.31■□□□□ 0.2
PUF60-212ENST00000528320 DUSP9Q99956 384 aaKnown RBP16.31■□□□□ 0.2
PUF60-212ENST00000528320 MAFFQ9ULX9 164 aa16.31■□□□□ 0.2
PUF60-212ENST00000528320 TRAF3IP3Q9Y228 551 aa16.31■□□□□ 0.2
PUF60-212ENST00000528320 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.31■□□□□ 0.29e-7■□□□□ 9.6
PUF60-212ENST00000528320 XPOTO43592 962 aaKnown RBP16.3■□□□□ 0.2
PUF60-212ENST00000528320 EXTL3O43909 919 aa16.3■□□□□ 0.2
PUF60-212ENST00000528320 XYLBO75191 536 aa16.3■□□□□ 0.2
PUF60-212ENST00000528320 IL18RAPO95256 599 aa16.3■□□□□ 0.2
PUF60-212ENST00000528320 CYP11A1P05108 521 aa16.3■□□□□ 0.2
PUF60-212ENST00000528320 GLULP15104 373 aa16.3■□□□□ 0.2
PUF60-212ENST00000528320 ATF2P15336 505 aa16.3■□□□□ 0.2
PUF60-212ENST00000528320 TYMPP19971 482 aa16.3■□□□□ 0.2
PUF60-212ENST00000528320 MYBPC2Q14324 1141 aa16.3■□□□□ 0.2
PUF60-212ENST00000528320 TMEM132DQ14C87 1099 aa16.3■□□□□ 0.2
PUF60-212ENST00000528320 KRT31Q15323 416 aa16.3■□□□□ 0.2
PUF60-212ENST00000528320 TPGS2Q68CL5 300 aa16.3■□□□□ 0.2
PUF60-212ENST00000528320 SCARA3Q6AZY7 606 aa16.3■□□□□ 0.2
PUF60-212ENST00000528320 MTSS1LQ765P7 747 aa16.3■□□□□ 0.2
PUF60-212ENST00000528320 FILIP1Q7Z7B0 1213 aa16.3■□□□□ 0.2
PUF60-212ENST00000528320 SPC24Q8NBT2 197 aa16.3■□□□□ 0.2
PUF60-212ENST00000528320 APPL2Q8NEU8 664 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms