RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 IVNS1ABPQ9Y6Y0 642 aa16.22■□□□□ 0.19
USH1C-207ENST00000527720 KAT6AQ92794 2004 aa16.21■□□□□ 0.19
USH1C-207ENST00000527720 COL1A2P08123 1366 aa16.21■□□□□ 0.19
USH1C-207ENST00000527720 SIGLEC16A6NMB1 481 aa16.21■□□□□ 0.19
USH1C-207ENST00000527720 ACSL3O95573 720 aa16.21■□□□□ 0.19
USH1C-207ENST00000527720 ATICP31939 592 aa16.21■□□□□ 0.19
USH1C-207ENST00000527720 OGDHQ02218 1023 aa16.21■□□□□ 0.19
USH1C-207ENST00000527720 EAPPQ56P03 285 aaPredicted RBP16.21■□□□□ 0.19
USH1C-207ENST00000527720 TFDP3Q5H9I0 405 aa16.21■□□□□ 0.19
USH1C-207ENST00000527720 IZUMO3Q5VZ72 239 aa16.21■□□□□ 0.19
USH1C-207ENST00000527720 HIBCHQ6NVY1 386 aaPredicted RBP16.21■□□□□ 0.19
USH1C-207ENST00000527720 MFSD7Q6UXD7 560 aa16.21■□□□□ 0.19
USH1C-207ENST00000527720 SCARA5Q6ZMJ2 495 aa16.21■□□□□ 0.19
USH1C-207ENST00000527720 USP50Q70EL3 339 aaPredicted RBP16.21■□□□□ 0.19
USH1C-207ENST00000527720 GSTA5Q7RTV2 222 aa16.21■□□□□ 0.19
USH1C-207ENST00000527720 ANKS1BQ7Z6G8 1248 aa16.21■□□□□ 0.19
USH1C-207ENST00000527720 UHMK1Q8TAS1 419 aaKnown RBP16.21■□□□□ 0.19
USH1C-207ENST00000527720 MDM1Q8TC05 714 aa16.21■□□□□ 0.19
USH1C-207ENST00000527720 ATXN2LQ8WWM7 1075 aaKnown RBP16.21■□□□□ 0.19
USH1C-207ENST00000527720 FAM124BQ9H5Z6 455 aaPredicted RBP16.21■□□□□ 0.19
USH1C-207ENST00000527720 ASB7Q9H672 318 aa16.21■□□□□ 0.19
USH1C-207ENST00000527720 MINDY3Q9H8M7 445 aa16.21■□□□□ 0.19
USH1C-207ENST00000527720 VRTNQ9H8Y1 702 aa16.21■□□□□ 0.19
USH1C-207ENST00000527720 IFT122Q9HBG6 1241 aa16.21■□□□□ 0.19
USH1C-207ENST00000527720 DDX20Q9UHI6 824 aaKnown RBP16.21■□□□□ 0.19
USH1C-207ENST00000527720 F8VP50 259 aa16.21■□□□□ 0.19
USH1C-207ENST00000527720 GJB1P08034 283 aa16.21■□□□□ 0.19
USH1C-207ENST00000527720 CXCL8P10145 99 aa16.21■□□□□ 0.19
USH1C-207ENST00000527720 OSTNP61366 133 aa16.21■□□□□ 0.19
USH1C-207ENST00000527720 ARHGAP1Q07960 439 aa16.21■□□□□ 0.19
USH1C-207ENST00000527720 ZFYVE27Q5T4F4 411 aa16.21■□□□□ 0.19
USH1C-207ENST00000527720 GKAP1Q5VSY0 366 aaPredicted RBP16.21■□□□□ 0.19
USH1C-207ENST00000527720 CEP120Q8N960 986 aa16.21■□□□□ 0.19
USH1C-207ENST00000527720 INTS9Q9NV88 658 aaKnown RBP16.21■□□□□ 0.19
USH1C-207ENST00000527720 SIX4Q9UIU6 781 aa16.21■□□□□ 0.19
USH1C-207ENST00000527720 PNMA3Q9UL41 463 aa16.21■□□□□ 0.19
USH1C-207ENST00000527720 hCG_1818297A0A087WSY0 165 aa16.2■□□□□ 0.18
USH1C-207ENST00000527720 ATF7P17544 494 aaPredicted RBP16.2■□□□□ 0.18
USH1C-207ENST00000527720 DRD4P21917 467 aa16.2■□□□□ 0.18
USH1C-207ENST00000527720 SLCO1A2P46721 670 aa16.2■□□□□ 0.18
USH1C-207ENST00000527720 ATP13A4Q4VNC1 1196 aa16.2■□□□□ 0.18
USH1C-207ENST00000527720 WDR78Q5VTH9 848 aa16.2■□□□□ 0.18
USH1C-207ENST00000527720 MOB2Q70IA6 237 aa16.2■□□□□ 0.18
USH1C-207ENST00000527720 ARMCX2Q7L311 632 aa16.2■□□□□ 0.18
USH1C-207ENST00000527720 CPLX4Q7Z7G2 160 aa16.2■□□□□ 0.18
USH1C-207ENST00000527720 CACNA2D3Q8IZS8 1091 aa16.2■□□□□ 0.18
USH1C-207ENST00000527720 ZCCHC9Q8N567 271 aaKnown RBP16.2■□□□□ 0.18
USH1C-207ENST00000527720 ALLCQ8N6M5 410 aa16.2■□□□□ 0.18
USH1C-207ENST00000527720 LINC01465Q8N7H1 131 aa16.2■□□□□ 0.18
USH1C-207ENST00000527720 C1orf127Q8N9H9 656 aa16.2■□□□□ 0.18
USH1C-207ENST00000527720 SEC16BQ96JE7 1060 aa16.2■□□□□ 0.18
USH1C-207ENST00000527720 ZNF317Q96PQ6 595 aaPredicted RBP16.2■□□□□ 0.18
USH1C-207ENST00000527720 FRMD8P1Q9BZ68 369 aaPredicted RBP16.2■□□□□ 0.18
USH1C-207ENST00000527720 RNPEPQ9H4A4 650 aa16.2■□□□□ 0.18
USH1C-207ENST00000527720 CYP3A43Q9HB55 503 aa16.2■□□□□ 0.18
USH1C-207ENST00000527720 PDGFCQ9NRA1 345 aa16.2■□□□□ 0.18
USH1C-207ENST00000527720 NINJ2Q9NZG7 142 aa16.2■□□□□ 0.18
USH1C-207ENST00000527720 NXF1Q9UBU9 619 aaKnown RBP16.2■□□□□ 0.18
USH1C-207ENST00000527720 ABHD2P08910 425 aa16.2■□□□□ 0.18
USH1C-207ENST00000527720 TCF4P15884 667 aa16.2■□□□□ 0.18
USH1C-207ENST00000527720 LONRF1Q17RB8 773 aa16.2■□□□□ 0.18
USH1C-207ENST00000527720 DENND1BQ6P3S1 775 aa16.2■□□□□ 0.18
USH1C-207ENST00000527720 EXOC3L1Q86VI1 746 aa16.2■□□□□ 0.18
USH1C-207ENST00000527720 NKD2Q969F2 451 aaPredicted RBP16.2■□□□□ 0.18
USH1C-207ENST00000527720 CCDC77Q9BR77 488 aa16.2■□□□□ 0.18
USH1C-207ENST00000527720 VTA1Q9NP79 307 aa16.2■□□□□ 0.18
USH1C-207ENST00000527720 DNPEPQ9ULA0 475 aa16.2■□□□□ 0.18
USH1C-207ENST00000527720 POLIQ9UNA4 740 aa16.2■□□□□ 0.18
USH1C-207ENST00000527720 PI4K2BG5E9Z4 385 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 GPR25O00155 361 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 DNALI1O14645 258 aaPredicted RBP16.19■□□□□ 0.18
USH1C-207ENST00000527720 LGALS2P05162 132 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 ITGAVP06756 1048 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 KRT19P08727 400 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 KRT7P08729 469 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 IQCF3P0C7M6 154 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 STAG3L1P0CL83 205 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 KRT3P12035 628 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 KRT10P13645 584 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 P4HA1P13674 534 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 INSRRP14616 1297 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 CD19P15391 556 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 CDKN2BP42772 138 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 VPS41P49754 854 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 RAD23BP54727 409 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 SNAPC2Q13487 334 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 STAT4Q14765 748 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 KYNUQ16719 465 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 QPCTQ16769 361 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 HADHQ16836 314 aaKnown RBP16.19■□□□□ 0.18
USH1C-207ENST00000527720 WDR72Q3MJ13 1102 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 PTPN20Q4JDL3 420 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 P3H4Q92791 437 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 EMID1Q96A84 441 aaPredicted RBP16.19■□□□□ 0.18
USH1C-207ENST00000527720 LGALS13Q9UHV8 139 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 ZNF148Q9UQR1 794 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 RBM47A0AV96 593 aaKnown RBP16.19■□□□□ 0.18
USH1C-207ENST00000527720 LACTBL1A8MY62 500 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 FSBPO95073 299 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 GH1P01241 217 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms