RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 KHSRPQ92945 711 aaKnown RBP eCLIP14.34□□□□□ -0.11
CAPN1-209ENST00000527469 RTP3Q9BQQ7 232 aa14.34□□□□□ -0.11
CAPN1-209ENST00000527469 ACBD6Q9BR61 282 aa14.34□□□□□ -0.11
CAPN1-209ENST00000527469 MKNK1Q9BUB5 465 aa14.34□□□□□ -0.11
CAPN1-209ENST00000527469 EPHX3Q9H6B9 360 aa14.34□□□□□ -0.11
CAPN1-209ENST00000527469 PCDHB5Q9Y5E4 795 aa14.34□□□□□ -0.11
CAPN1-209ENST00000527469 ZFP37Q9Y6Q3 630 aaPredicted RBP14.34□□□□□ -0.11
CAPN1-209ENST00000527469 BICDL2A1A5D9 508 aa14.33□□□□□ -0.12
CAPN1-209ENST00000527469 SLC16A3O15427 465 aaKnown RBP14.33□□□□□ -0.12
CAPN1-209ENST00000527469 RHOP08100 348 aa14.33□□□□□ -0.12
CAPN1-209ENST00000527469 TRIM49P0CI25 452 aa14.33□□□□□ -0.12
CAPN1-209ENST00000527469 TRIM49CP0CI26 452 aa14.33□□□□□ -0.12
CAPN1-209ENST00000527469 MYL4P12829 197 aa14.33□□□□□ -0.12
CAPN1-209ENST00000527469 TRIM21P19474 475 aaKnown RBP14.33□□□□□ -0.12
CAPN1-209ENST00000527469 CCNE1P24864 410 aa14.33□□□□□ -0.12
CAPN1-209ENST00000527469 GNL1P36915 607 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-209ENST00000527469 GCLMP48507 274 aa14.33□□□□□ -0.12
CAPN1-209ENST00000527469 MORC3Q14149 939 aa14.33□□□□□ -0.12
CAPN1-209ENST00000527469 SGSM1Q2NKQ1 1148 aa14.33□□□□□ -0.12
CAPN1-209ENST00000527469 DCAF17Q5H9S7 520 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-209ENST00000527469 TCERG1LQ5VWI1 586 aa14.33□□□□□ -0.12
CAPN1-209ENST00000527469 ANKRD40Q6AI12 368 aa14.33□□□□□ -0.12
CAPN1-209ENST00000527469 SCARA3Q6AZY7 606 aa14.33□□□□□ -0.12
CAPN1-209ENST00000527469 SPATA2LQ8IUW3 424 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-209ENST00000527469 TRIML1Q8N9V2 468 aa14.33□□□□□ -0.12
CAPN1-209ENST00000527469 LEMD2Q8NC56 503 aa14.33□□□□□ -0.12
CAPN1-209ENST00000527469 OR6B3Q8NGW1 331 aa14.33□□□□□ -0.12
CAPN1-209ENST00000527469 ING5Q8WYH8 240 aa14.33□□□□□ -0.12
CAPN1-209ENST00000527469 TAF4BQ92750 862 aa14.33□□□□□ -0.12
CAPN1-209ENST00000527469 MYADMQ96S97 322 aa14.33□□□□□ -0.12
CAPN1-209ENST00000527469 GZF1Q9H116 711 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-209ENST00000527469 DNMT3BQ9UBC3 853 aaKnown RBP14.33□□□□□ -0.12
CAPN1-209ENST00000527469 HSFX1Q9UBD0 423 aa14.33□□□□□ -0.12
CAPN1-209ENST00000527469 CDH7Q9ULB5 785 aa14.33□□□□□ -0.12
CAPN1-209ENST00000527469 SORCS3Q9UPU3 1222 aa14.33□□□□□ -0.12
CAPN1-209ENST00000527469 TSC2P49815 1807 aa14.33□□□□□ -0.12
CAPN1-209ENST00000527469 STAU1O95793 577 aaKnown RBP14.32□□□□□ -0.12
CAPN1-209ENST00000527469 C4BPAP04003 597 aaKnown RBP14.32□□□□□ -0.12
CAPN1-209ENST00000527469 ASGR2P07307 311 aa14.32□□□□□ -0.12
CAPN1-209ENST00000527469 PDGFRBP09619 1106 aa14.32□□□□□ -0.12
CAPN1-209ENST00000527469 LAMP2P13473 410 aa14.32□□□□□ -0.12
CAPN1-209ENST00000527469 WARSP23381 471 aaKnown RBP14.32□□□□□ -0.12
CAPN1-209ENST00000527469 ENPEPQ07075 957 aa14.32□□□□□ -0.12
CAPN1-209ENST00000527469 MAPRE1Q15691 268 aaKnown RBP14.32□□□□□ -0.12
CAPN1-209ENST00000527469 ZACNQ401N2 412 aa14.32□□□□□ -0.12
CAPN1-209ENST00000527469 CCDC40Q4G0X9 1142 aa14.32□□□□□ -0.12
CAPN1-209ENST00000527469 INTS6LQ5JSJ4 861 aaKnown RBP14.32□□□□□ -0.12
CAPN1-209ENST00000527469 TMEM31Q5JXX7 168 aa14.32□□□□□ -0.12
CAPN1-209ENST00000527469 SCARA5Q6ZMJ2 495 aa14.32□□□□□ -0.12
CAPN1-209ENST00000527469 C4orf50Q6ZRC1 276 aa14.32□□□□□ -0.12
CAPN1-209ENST00000527469 SV2AQ7L0J3 742 aa14.32□□□□□ -0.12
CAPN1-209ENST00000527469 NELFBQ8WX92 580 aa14.32□□□□□ -0.12
CAPN1-209ENST00000527469 SYT15Q9BQS2 421 aa14.32□□□□□ -0.12
CAPN1-209ENST00000527469 KIAA1468Q9P260 1216 aa14.32□□□□□ -0.12
CAPN1-209ENST00000527469 IGSF9Q9P2J2 1179 aa14.32□□□□□ -0.12
CAPN1-209ENST00000527469 EPS15L1Q9UBC2 864 aa14.32□□□□□ -0.12
CAPN1-209ENST00000527469 ARMCX3Q9UH62 379 aaPredicted RBP14.32□□□□□ -0.12
CAPN1-209ENST00000527469 CDH9Q9ULB4 789 aa14.32□□□□□ -0.12
CAPN1-209ENST00000527469 CTNND2Q9UQB3 1225 aa14.32□□□□□ -0.12
CAPN1-209ENST00000527469 ASB3Q9Y575 518 aa14.32□□□□□ -0.12
CAPN1-209ENST00000527469 DENND4AQ7Z401 1863 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 MUC3AQ02505 3323 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 TRIM49BA6NDI0 452 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 A8MXQ7 604 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 TACC1O75410 805 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 SOAT2O75908 522 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 FGF19O95750 216 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 HLA-DRAP01903 254 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 GTF2H1P32780 548 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 PSMC1P62191 440 aaKnown RBP14.31□□□□□ -0.12
CAPN1-209ENST00000527469 RPL10AP62906 217 aaKnown RBP14.31□□□□□ -0.12
CAPN1-209ENST00000527469 ZXDAP98168 799 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 PAK1Q13153 545 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 KRT39Q6A163 491 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 CLEC17AQ6ZS10 378 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 MTSS1LQ765P7 747 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 LRRTM3Q86VH5 581 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 OSTM1Q86WC4 334 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 UBALD2Q8IYN6 164 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 ITFG1Q8TB96 612 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 KBTBD7Q8WVZ9 684 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 EDAQ92838 391 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 FGF13Q92913 245 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 GCNAQ96QF7 691 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 MRPL45Q9BRJ2 306 aaKnown RBP14.31□□□□□ -0.12
CAPN1-209ENST00000527469 PI4K2AQ9BTU6 479 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 DNAI2Q9GZS0 605 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 NUP62CLQ9H1M0 184 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 CRISPLD1Q9H336 500 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 CLSTN2Q9H4D0 955 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 SLITRK6Q9H5Y7 841 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 KCNK12Q9HB15 430 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 TMEM8AQ9HCN3 771 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.31□□□□□ -0.122e-14■■■■■ 49.7
CAPN1-209ENST00000527469 GDE1Q9NZC3 331 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 CEP72Q9P209 647 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 GTF3C4Q9UKN8 822 aa14.31□□□□□ -0.12
CAPN1-209ENST00000527469 FAM86C2PA6NEL3 165 aa14.3□□□□□ -0.12
CAPN1-209ENST00000527469 GABRDO14764 452 aa14.3□□□□□ -0.12
CAPN1-209ENST00000527469 N4BP1O75113 896 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms