RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 GOLGA8RI6L899 631 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 AQP9O43315 295 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 PHF2O75151 1096 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 SIN3BO75182 1162 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 TAF5LO75529 589 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 TRPA1O75762 1119 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 CIB2O75838 187 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 OR6B1O95007 311 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 KLHL2O95198 593 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 GAS8O95995 478 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 ABCB1P08183 1280 aaPredicted RBP6.11□□□□□ -1.43
CD44-225ENST00000527326 SMIM18P0DKX4 95 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 PCP11498 1178 aaKnown RBP6.11□□□□□ -1.43
CD44-225ENST00000527326 FDPSP14324 419 aaKnown RBP6.11□□□□□ -1.43
CD44-225ENST00000527326 ANPEPP15144 967 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 PDIA3P30101 505 aaKnown RBP6.11□□□□□ -1.43
CD44-225ENST00000527326 WEE1P30291 646 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 CDC25AP30304 524 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 IFNA8P32881 189 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 HOXD13P35453 343 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 LONP1P36776 959 aaKnown RBP6.11□□□□□ -1.43
CD44-225ENST00000527326 SLC1A1P43005 524 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 TNNI2P48788 182 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 CDK9P50750 372 aaKnown RBP6.11□□□□□ -1.43
CD44-225ENST00000527326 NEK3P51956 506 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 RAP1GDS1P52306 607 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 NR1H2P55055 460 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 CHRNEQ04844 493 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 MGAT5Q09328 741 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 SPEM2Q0P670 501 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 GALNT1Q10472 559 aaPredicted RBP6.11□□□□□ -1.43
CD44-225ENST00000527326 PAK1Q13153 545 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 C16orf72Q14CZ0 275 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 PDK3Q15120 406 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 ZNF827Q17R98 1081 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 TRMT5Q32P41 509 aaKnown RBP6.11□□□□□ -1.43
CD44-225ENST00000527326 ZNF829Q3KNS6 432 aaPredicted RBP6.11□□□□□ -1.43
CD44-225ENST00000527326 CERKLQ49MI3 558 aaPredicted RBP6.11□□□□□ -1.43
CD44-225ENST00000527326 SLC45A4Q5BKX6 768 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 OTUD7BQ6GQQ9 843 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 AAGABQ6PD74 315 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 SLC30A10Q6XR72 485 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 FRA10AC1Q70Z53 315 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 CYB5R4Q7L1T6 521 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 TMC7Q7Z402 723 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 KLHL7Q8IXQ5 586 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 HACE1Q8IYU2 909 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 AHI1Q8N157 1196 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 CENPSQ8N2Z9 138 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 BBOF1Q8ND07 529 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 OR6Y1Q8NGX8 325 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 SCFD2Q8WU76 684 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 RASSF5Q8WWW0 418 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 MCUR1Q96AQ8 359 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 HSH2DQ96JZ2 352 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 EGLN2Q96KS0 407 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 FAM227BQ96M60 508 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 RUNDC3BQ96NL0 473 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 TGS1Q96RS0 853 aaKnown RBP6.11□□□□□ -1.43
CD44-225ENST00000527326 FMO2Q99518 471 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 DHRS9Q9BPW9 319 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 PSD2Q9BQI7 771 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 PYM1Q9BRP8 204 aaKnown RBP6.11□□□□□ -1.43
CD44-225ENST00000527326 BTBD10Q9BSF8 475 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 B3GNT4Q9C0J1 378 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 VPS16Q9H269 839 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 ZNF696Q9H7X3 374 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 IFT122Q9HBG6 1241 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 TRNAU1APQ9NX07 287 aaKnown RBP6.11□□□□□ -1.43
CD44-225ENST00000527326 SMARCAL1Q9NZC9 954 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 EPS15L1Q9UBC2 864 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 PARP2Q9UGN5 583 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 RSL24D1Q9UHA3 163 aaKnown RBP6.11□□□□□ -1.43
CD44-225ENST00000527326 MAFFQ9ULX9 164 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 CTNND2Q9UQB3 1225 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 SCINQ9Y6U3 715 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 TET3O43151 1660 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 FAM208AQ9UK61 1670 aaKnown RBP6.1□□□□□ -1.43
CD44-225ENST00000527326 NEXMIFQ5QGS0 1516 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 TULP4Q9NRJ4 1543 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 C15orf38-AP3S2A0A0A6YYH1 394 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 A0A0D9SFI3 127 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 ADARB2-AS1A8MUL3 147 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 H3BNX3 289 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 PGRMC1O00264 195 aaKnown RBP6.1□□□□□ -1.43
CD44-225ENST00000527326 FOXN1O15353 648 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 MAGEB2O15479 319 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 NCK2O43639 380 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 PEX1O43933 1283 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 RANBP6O60518 1105 aaKnown RBP6.1□□□□□ -1.43
CD44-225ENST00000527326 MAGEC1O60732 1142 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 ZC3H11AO75152 810 aaKnown RBP eCLIP6.1□□□□□ -1.43
CD44-225ENST00000527326 PEX14O75381 377 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 SPAG7O75391 227 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 MTA2O94776 668 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 UFL1O94874 794 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 TNFAIP8O95379 198 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 CYP1A2P05177 515 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 ALOX5P09917 674 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 T-ENOLP0DO92 83 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms