RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 HCFC1R1Q9NWW0 138 aa12.03□□□□□ -0.48
CTSB-214ENST00000527243 CEP72Q9P209 647 aa12.03□□□□□ -0.48
CTSB-214ENST00000527243 EPS15L1Q9UBC2 864 aa12.03□□□□□ -0.48
CTSB-214ENST00000527243 YIPF1Q9Y548 306 aa12.03□□□□□ -0.48
CTSB-214ENST00000527243 TRIOO75962 3097 aa12.02□□□□□ -0.49
CTSB-214ENST00000527243 NRG2O14511 850 aaPredicted RBP12.02□□□□□ -0.49
CTSB-214ENST00000527243 PRRG1O14668 218 aa12.02□□□□□ -0.49
CTSB-214ENST00000527243 PSMA7O14818 248 aa12.02□□□□□ -0.49
CTSB-214ENST00000527243 CETN3O15182 167 aa12.02□□□□□ -0.49
CTSB-214ENST00000527243 SLC16A3O15427 465 aaKnown RBP12.02□□□□□ -0.49
CTSB-214ENST00000527243 DCXO43602 365 aa12.02□□□□□ -0.49
CTSB-214ENST00000527243 HCRTO43612 131 aa12.02□□□□□ -0.49
CTSB-214ENST00000527243 TRIM49P0CI25 452 aa12.02□□□□□ -0.49
CTSB-214ENST00000527243 TRIM49CP0CI26 452 aa12.02□□□□□ -0.49
CTSB-214ENST00000527243 CCDC192P0DO97 292 aa12.02□□□□□ -0.49
CTSB-214ENST00000527243 SP100P23497 879 aaPredicted RBP12.02□□□□□ -0.49
CTSB-214ENST00000527243 PPP1R2P41236 205 aa12.02□□□□□ -0.49
CTSB-214ENST00000527243 LHX1P48742 406 aa12.02□□□□□ -0.49
CTSB-214ENST00000527243 SMARCB1Q12824 385 aa12.02□□□□□ -0.49
CTSB-214ENST00000527243 DUSP4Q13115 394 aa12.02□□□□□ -0.49
CTSB-214ENST00000527243 NCOA4Q13772 614 aa12.02□□□□□ -0.49
CTSB-214ENST00000527243 CCDC142Q17RM4 750 aa12.02□□□□□ -0.49
CTSB-214ENST00000527243 SLC39A12Q504Y0 691 aa12.02□□□□□ -0.49
CTSB-214ENST00000527243 INTS6LQ5JSJ4 861 aaKnown RBP12.02□□□□□ -0.49
CTSB-214ENST00000527243 PRSS36Q5K4E3 855 aa12.02□□□□□ -0.49
CTSB-214ENST00000527243 FAM171BQ6P995 826 aa12.02□□□□□ -0.49
CTSB-214ENST00000527243 PLCD3Q8N3E9 789 aa12.02□□□□□ -0.49
CTSB-214ENST00000527243 ITFG1Q8TB96 612 aa12.02□□□□□ -0.49
CTSB-214ENST00000527243 EEF2KMTQ96G04 330 aa12.02□□□□□ -0.49
CTSB-214ENST00000527243 PGLYRP2Q96PD5 576 aa12.02□□□□□ -0.49
CTSB-214ENST00000527243 LRRC3Q9BY71 257 aa12.02□□□□□ -0.49
CTSB-214ENST00000527243 PIDD1Q9HB75 910 aa12.02□□□□□ -0.49
CTSB-214ENST00000527243 C11orf16Q9NQ32 467 aa12.02□□□□□ -0.49
CTSB-214ENST00000527243 DDX43Q9NXZ2 648 aaKnown RBP12.02□□□□□ -0.49
CTSB-214ENST00000527243 MUTYHQ9UIF7 546 aa12.02□□□□□ -0.49
CTSB-214ENST00000527243 TECTAO75443 2155 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 TULP1O00294 542 aaPredicted RBP12.01□□□□□ -0.49
CTSB-214ENST00000527243 BIN1O00499 593 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 MOSPD3O75425 235 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 CAVIN2O95810 425 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 ASS1P00966 412 aaKnown RBP12.01□□□□□ -0.49
CTSB-214ENST00000527243 HLA-DRAP01903 254 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 LRG1P02750 347 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 RHOP08100 348 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 FSHRP23945 695 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 LMO2P25791 158 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 PCSK1P29120 753 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 GTF2H1P32780 548 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 CCR2P41597 374 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 TWF1Q12792 350 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 BIRC3Q13489 604 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 TRPC3Q13507 836 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 CAMK4Q16566 473 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 SLC5A9Q2M3M2 681 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 WDR72Q3MJ13 1102 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 HS1BP3Q53T59 392 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 DCP1BQ8IZD4 617 aaKnown RBP12.01□□□□□ -0.49
CTSB-214ENST00000527243 SPPL2BQ8TCT7 592 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 C2orf15Q8WU43 125 aaKnown RBP12.01□□□□□ -0.49
CTSB-214ENST00000527243 ACSF2Q96CM8 615 aaPredicted RBP12.01□□□□□ -0.49
CTSB-214ENST00000527243 CEP63Q96MT8 703 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 MED15Q96RN5 788 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 TSG101Q99816 390 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 MRPL45Q9BRJ2 306 aaKnown RBP12.01□□□□□ -0.49
CTSB-214ENST00000527243 RBSNQ9H1K0 784 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 TMEM8AQ9HCN3 771 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 CRTAC1Q9NQ79 661 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.01□□□□□ -0.49
CTSB-214ENST00000527243 POLIQ9UNA4 740 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 SLC27A5Q9Y2P5 690 aa12.01□□□□□ -0.49
CTSB-214ENST00000527243 MYBPHLA2RUH7 354 aa12□□□□□ -0.49
CTSB-214ENST00000527243 ANHXE9PGG2 379 aa12□□□□□ -0.49
CTSB-214ENST00000527243 PHACTR2O75167 634 aa12□□□□□ -0.49
CTSB-214ENST00000527243 ATP2C2O75185 946 aa12□□□□□ -0.49
CTSB-214ENST00000527243 SOAT2O75908 522 aa12□□□□□ -0.49
CTSB-214ENST00000527243 MICAL2O94851 1124 aa12□□□□□ -0.49
CTSB-214ENST00000527243 HAPLN1P10915 354 aaPredicted RBP12□□□□□ -0.49
CTSB-214ENST00000527243 EPB41P11171 864 aaKnown RBP12□□□□□ -0.49
CTSB-214ENST00000527243 LAMP2P13473 410 aa12□□□□□ -0.49
CTSB-214ENST00000527243 KRT13P13646 458 aa12□□□□□ -0.49
CTSB-214ENST00000527243 ALADP13716 330 aa12□□□□□ -0.49
CTSB-214ENST00000527243 PTPN2P17706 415 aa12□□□□□ -0.49
CTSB-214ENST00000527243 ATF6P18850 670 aa12□□□□□ -0.49
CTSB-214ENST00000527243 ACAT1P24752 427 aaKnown RBP12□□□□□ -0.49
CTSB-214ENST00000527243 GCLMP48507 274 aa12□□□□□ -0.49
CTSB-214ENST00000527243 MYL7Q01449 175 aa12□□□□□ -0.49
CTSB-214ENST00000527243 TSPY1Q01534 308 aa12□□□□□ -0.49
CTSB-214ENST00000527243 STIM1Q13586 685 aa12□□□□□ -0.49
CTSB-214ENST00000527243 NFE2Q16621 373 aaPredicted RBP12□□□□□ -0.49
CTSB-214ENST00000527243 PTPN21Q16825 1174 aa12□□□□□ -0.49
CTSB-214ENST00000527243 SGSM1Q2NKQ1 1148 aa12□□□□□ -0.49
CTSB-214ENST00000527243 ZNF699Q32M78 642 aa12□□□□□ -0.49
CTSB-214ENST00000527243 PABPC1LQ4VXU2 614 aaKnown RBP12□□□□□ -0.49
CTSB-214ENST00000527243 FILIP1Q7Z7B0 1213 aa12□□□□□ -0.49
CTSB-214ENST00000527243 TMC8Q8IU68 726 aa12□□□□□ -0.49
CTSB-214ENST00000527243 NPAS3Q8IXF0 933 aa12□□□□□ -0.49
CTSB-214ENST00000527243 TAS1R2Q8TE23 839 aa12□□□□□ -0.49
CTSB-214ENST00000527243 NELFBQ8WX92 580 aa12□□□□□ -0.49
CTSB-214ENST00000527243 TAF4BQ92750 862 aa12□□□□□ -0.49
CTSB-214ENST00000527243 FGF13Q92913 245 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms