RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 HCRTO43612 131 aa17.38■□□□□ 0.37
SSSCA1-202ENST00000526433 HLA-DRAP01903 254 aa17.38■□□□□ 0.37
SSSCA1-202ENST00000526433 WARSP23381 471 aaKnown RBP17.38■□□□□ 0.37
SSSCA1-202ENST00000526433 LMO2P25791 158 aa17.38■□□□□ 0.37
SSSCA1-202ENST00000526433 GNL1P36915 607 aaPredicted RBP17.38■□□□□ 0.37
SSSCA1-202ENST00000526433 STX17P56962 302 aa17.38■□□□□ 0.37
SSSCA1-202ENST00000526433 TWF1Q12792 350 aa17.38■□□□□ 0.37
SSSCA1-202ENST00000526433 SMARCB1Q12824 385 aa17.38■□□□□ 0.37
SSSCA1-202ENST00000526433 ZNF699Q32M78 642 aa17.38■□□□□ 0.37
SSSCA1-202ENST00000526433 ZNF667Q5HYK9 610 aa17.38■□□□□ 0.37
SSSCA1-202ENST00000526433 TTI2Q6NXR4 508 aa17.38■□□□□ 0.37
SSSCA1-202ENST00000526433 FILIP1Q7Z7B0 1213 aa17.38■□□□□ 0.37
SSSCA1-202ENST00000526433 ZDHHC14Q8IZN3 488 aa17.38■□□□□ 0.37
SSSCA1-202ENST00000526433 PLCD3Q8N3E9 789 aa17.38■□□□□ 0.37
SSSCA1-202ENST00000526433 TDRD5Q8NAT2 981 aaKnown RBP17.38■□□□□ 0.37
SSSCA1-202ENST00000526433 GPT2Q8TD30 523 aa17.38■□□□□ 0.37
SSSCA1-202ENST00000526433 ELMO3Q96BJ8 720 aa17.38■□□□□ 0.37
SSSCA1-202ENST00000526433 ACSF2Q96CM8 615 aaPredicted RBP17.38■□□□□ 0.37
SSSCA1-202ENST00000526433 ZNF512Q96ME7 567 aaPredicted RBP17.38■□□□□ 0.37
SSSCA1-202ENST00000526433 MRPL45Q9BRJ2 306 aaKnown RBP17.38■□□□□ 0.37
SSSCA1-202ENST00000526433 NUP62CLQ9H1M0 184 aa17.38■□□□□ 0.37
SSSCA1-202ENST00000526433 MMRN2Q9H8L6 949 aa17.38■□□□□ 0.37
SSSCA1-202ENST00000526433 TMLHEQ9NVH6 421 aa17.38■□□□□ 0.37
SSSCA1-202ENST00000526433 LIMD1Q9UGP4 676 aa17.38■□□□□ 0.37
SSSCA1-202ENST00000526433 DOCK8Q8NF50 2099 aa17.37■□□□□ 0.37
SSSCA1-202ENST00000526433 TACC1O75410 805 aa17.37■□□□□ 0.37
SSSCA1-202ENST00000526433 CLSTN1O94985 981 aa17.37■□□□□ 0.37
SSSCA1-202ENST00000526433 PDGFRBP09619 1106 aa17.37■□□□□ 0.37
SSSCA1-202ENST00000526433 FSHRP23945 695 aa17.37■□□□□ 0.37
SSSCA1-202ENST00000526433 PCSK1P29120 753 aa17.37■□□□□ 0.37
SSSCA1-202ENST00000526433 GBP2P32456 591 aaPredicted RBP17.37■□□□□ 0.37
SSSCA1-202ENST00000526433 GTF2H1P32780 548 aa17.37■□□□□ 0.37
SSSCA1-202ENST00000526433 TUFMP49411 452 aaKnown RBP17.37■□□□□ 0.37
SSSCA1-202ENST00000526433 PAK1Q13153 545 aa17.37■□□□□ 0.37
SSSCA1-202ENST00000526433 INTS6LQ5JSJ4 861 aaKnown RBP17.37■□□□□ 0.37
SSSCA1-202ENST00000526433 FOXR2Q6PJQ5 311 aa17.37■□□□□ 0.37
SSSCA1-202ENST00000526433 ELMOD1Q8N336 334 aa17.37■□□□□ 0.37
SSSCA1-202ENST00000526433 C2orf15Q8WU43 125 aaKnown RBP17.37■□□□□ 0.37
SSSCA1-202ENST00000526433 TAF4BQ92750 862 aa17.37■□□□□ 0.37
SSSCA1-202ENST00000526433 CEP63Q96MT8 703 aa17.37■□□□□ 0.37
SSSCA1-202ENST00000526433 MYADMQ96S97 322 aa17.37■□□□□ 0.37
SSSCA1-202ENST00000526433 SNX25Q9H3E2 840 aa17.37■□□□□ 0.37
SSSCA1-202ENST00000526433 TMEM8AQ9HCN3 771 aa17.37■□□□□ 0.37
SSSCA1-202ENST00000526433 CEP72Q9P209 647 aa17.37■□□□□ 0.37
SSSCA1-202ENST00000526433 HSFX1Q9UBD0 423 aa17.37■□□□□ 0.37
SSSCA1-202ENST00000526433 ARMCX3Q9UH62 379 aaPredicted RBP17.37■□□□□ 0.37
SSSCA1-202ENST00000526433 GTF3C4Q9UKN8 822 aa17.37■□□□□ 0.37
SSSCA1-202ENST00000526433 YIPF1Q9Y548 306 aa17.37■□□□□ 0.37
SSSCA1-202ENST00000526433 PCDHB5Q9Y5E4 795 aa17.37■□□□□ 0.37
SSSCA1-202ENST00000526433 STX10O60499 249 aa17.36■□□□□ 0.37
SSSCA1-202ENST00000526433 N4BP1O75113 896 aaKnown RBP17.36■□□□□ 0.37
SSSCA1-202ENST00000526433 ATP2C2O75185 946 aa17.36■□□□□ 0.37
SSSCA1-202ENST00000526433 PIK3CAP42336 1068 aa17.36■□□□□ 0.37
SSSCA1-202ENST00000526433 ALDH1A3P47895 512 aa17.36■□□□□ 0.37
SSSCA1-202ENST00000526433 EPHB3P54753 998 aa17.36■□□□□ 0.37
SSSCA1-202ENST00000526433 CDH8P55286 799 aa17.36■□□□□ 0.37
SSSCA1-202ENST00000526433 PLD1Q13393 1074 aa17.36■□□□□ 0.37
SSSCA1-202ENST00000526433 NFE2Q16621 373 aaPredicted RBP17.36■□□□□ 0.37
SSSCA1-202ENST00000526433 PABPC1LQ4VXU2 614 aaKnown RBP17.36■□□□□ 0.37
SSSCA1-202ENST00000526433 TTC9BQ8N6N2 239 aa17.36■□□□□ 0.37
SSSCA1-202ENST00000526433 OR6B3Q8NGW1 331 aa17.36■□□□□ 0.37
SSSCA1-202ENST00000526433 SPPL2BQ8TCT7 592 aa17.36■□□□□ 0.37
SSSCA1-202ENST00000526433 TAS1R2Q8TE23 839 aa17.36■□□□□ 0.37
SSSCA1-202ENST00000526433 PKMYT1Q99640 499 aa17.36■□□□□ 0.37
SSSCA1-202ENST00000526433 CORO1BQ9BR76 489 aa17.36■□□□□ 0.37
SSSCA1-202ENST00000526433 EPHX3Q9H6B9 360 aa17.36■□□□□ 0.37
SSSCA1-202ENST00000526433 ABI2Q9NYB9 513 aaPredicted RBP17.36■□□□□ 0.37
SSSCA1-202ENST00000526433 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.36■□□□□ 0.37
SSSCA1-202ENST00000526433 MUTYHQ9UIF7 546 aa17.36■□□□□ 0.37
SSSCA1-202ENST00000526433 CDH9Q9ULB4 789 aa17.36■□□□□ 0.37
SSSCA1-202ENST00000526433 MYBPHLA2RUH7 354 aa17.35■□□□□ 0.37
SSSCA1-202ENST00000526433 PI4K2BG5E9Z4 385 aa17.35■□□□□ 0.37
SSSCA1-202ENST00000526433 SOAT2O75908 522 aa17.35■□□□□ 0.37
SSSCA1-202ENST00000526433 ASS1P00966 412 aaKnown RBP17.35■□□□□ 0.37
SSSCA1-202ENST00000526433 RHOP08100 348 aa17.35■□□□□ 0.37
SSSCA1-202ENST00000526433 HAPLN1P10915 354 aaPredicted RBP17.35■□□□□ 0.37
SSSCA1-202ENST00000526433 MGAT5BQ3V5L5 792 aa17.35■□□□□ 0.37
SSSCA1-202ENST00000526433 TCERG1LQ5VWI1 586 aa17.35■□□□□ 0.37
SSSCA1-202ENST00000526433 KRT39Q6A163 491 aa17.35■□□□□ 0.37
SSSCA1-202ENST00000526433 IQCEQ6IPM2 695 aa17.35■□□□□ 0.37
SSSCA1-202ENST00000526433 SPOPLQ6IQ16 392 aa17.35■□□□□ 0.37
SSSCA1-202ENST00000526433 FAM171BQ6P995 826 aa17.35■□□□□ 0.37
SSSCA1-202ENST00000526433 GET4Q7L5D6 327 aaPredicted RBP17.35■□□□□ 0.37
SSSCA1-202ENST00000526433 FRMD5Q7Z6J6 570 aa17.35■□□□□ 0.37
SSSCA1-202ENST00000526433 HS6ST3Q8IZP7 471 aa17.35■□□□□ 0.37
SSSCA1-202ENST00000526433 MLKLQ8NB16 471 aa17.35■□□□□ 0.37
SSSCA1-202ENST00000526433 ITFG1Q8TB96 612 aa17.35■□□□□ 0.37
SSSCA1-202ENST00000526433 SYT15Q9BQS2 421 aa17.35■□□□□ 0.37
SSSCA1-202ENST00000526433 PI4K2AQ9BTU6 479 aa17.35■□□□□ 0.37
SSSCA1-202ENST00000526433 SRRTQ9BXP5 876 aaKnown RBP17.35■□□□□ 0.37
SSSCA1-202ENST00000526433 SMYD3Q9H7B4 428 aa17.35■□□□□ 0.37
SSSCA1-202ENST00000526433 METTL14Q9HCE5 456 aaKnown RBP17.35■□□□□ 0.37
SSSCA1-202ENST00000526433 AVENQ9NQS1 362 aaPredicted RBP17.35■□□□□ 0.37
SSSCA1-202ENST00000526433 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.35■□□□□ 0.379e-7■■■■■ 143.1
SSSCA1-202ENST00000526433 MRPS23Q9Y3D9 190 aaKnown RBP17.35■□□□□ 0.37
SSSCA1-202ENST00000526433 NME7Q9Y5B8 376 aa17.35■□□□□ 0.37
SSSCA1-202ENST00000526433 DCXO43602 365 aa17.34■□□□□ 0.37
SSSCA1-202ENST00000526433 LRRN2O75325 713 aa17.34■□□□□ 0.37
SSSCA1-202ENST00000526433 LAMP2P13473 410 aa17.34■□□□□ 0.37
SSSCA1-202ENST00000526433 P4HA1P13674 534 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms