RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 PCSK1P29120 753 aa13.83□□□□□ -0.2
SMPD1-202ENST00000526280 UVSSAQ2YD98 709 aa13.83□□□□□ -0.2
SMPD1-202ENST00000526280 MIIPQ5JXC2 388 aa13.83□□□□□ -0.2
SMPD1-202ENST00000526280 ELMSAN1Q6PJG2 1045 aa13.83□□□□□ -0.2
SMPD1-202ENST00000526280 SCARA5Q6ZMJ2 495 aa13.83□□□□□ -0.2
SMPD1-202ENST00000526280 RNF19BQ6ZMZ0 732 aa13.83□□□□□ -0.2
SMPD1-202ENST00000526280 RTL10Q7L3V2 364 aa13.83□□□□□ -0.2
SMPD1-202ENST00000526280 LRRTM3Q86VH5 581 aa13.83□□□□□ -0.2
SMPD1-202ENST00000526280 DHX40Q8IX18 779 aaKnown RBP13.83□□□□□ -0.2
SMPD1-202ENST00000526280 EHBP1Q8NDI1 1231 aa13.83□□□□□ -0.2
SMPD1-202ENST00000526280 OR6B3Q8NGW1 331 aa13.83□□□□□ -0.2
SMPD1-202ENST00000526280 TATDN2Q93075 761 aa13.83□□□□□ -0.2
SMPD1-202ENST00000526280 SDCBP2Q9H190 292 aa13.83□□□□□ -0.2
SMPD1-202ENST00000526280 S1PR5Q9H228 398 aa13.83□□□□□ -0.2
SMPD1-202ENST00000526280 HSD3B7Q9H2F3 369 aa13.83□□□□□ -0.2
SMPD1-202ENST00000526280 CYP3A43Q9HB55 503 aa13.83□□□□□ -0.2
SMPD1-202ENST00000526280 CDH9Q9ULB4 789 aa13.83□□□□□ -0.2
SMPD1-202ENST00000526280 NME7Q9Y5B8 376 aa13.83□□□□□ -0.2
SMPD1-202ENST00000526280 HCRTO43612 131 aa13.82□□□□□ -0.2
SMPD1-202ENST00000526280 PAPLNO95428 1278 aa13.82□□□□□ -0.2
SMPD1-202ENST00000526280 VNN2O95498 520 aa13.82□□□□□ -0.2
SMPD1-202ENST00000526280 CAVIN2O95810 425 aa13.82□□□□□ -0.2
SMPD1-202ENST00000526280 PDGFRBP09619 1106 aa13.82□□□□□ -0.2
SMPD1-202ENST00000526280 WEE2P0C1S8 567 aa13.82□□□□□ -0.2
SMPD1-202ENST00000526280 PRKCSHP14314 528 aaPredicted RBP13.82□□□□□ -0.2
SMPD1-202ENST00000526280 ACAT1P24752 427 aaKnown RBP13.82□□□□□ -0.2
SMPD1-202ENST00000526280 RAP1GAPP47736 663 aa13.82□□□□□ -0.2
SMPD1-202ENST00000526280 TSPY1Q01534 308 aa13.82□□□□□ -0.2
SMPD1-202ENST00000526280 TFF2Q03403 129 aa13.82□□□□□ -0.2
SMPD1-202ENST00000526280 ADCY1Q08828 1119 aa13.82□□□□□ -0.2
SMPD1-202ENST00000526280 SMARCB1Q12824 385 aa13.82□□□□□ -0.2
SMPD1-202ENST00000526280 IQCB1Q15051 598 aa13.82□□□□□ -0.2
SMPD1-202ENST00000526280 LEXMQ3ZCV2 418 aa13.82□□□□□ -0.2
SMPD1-202ENST00000526280 VWA3BQ502W6 1294 aa13.82□□□□□ -0.2
SMPD1-202ENST00000526280 SLC39A12Q504Y0 691 aa13.82□□□□□ -0.2
SMPD1-202ENST00000526280 INTS6LQ5JSJ4 861 aaKnown RBP13.82□□□□□ -0.2
SMPD1-202ENST00000526280 TCEAL8Q8IYN2 117 aa13.82□□□□□ -0.2
SMPD1-202ENST00000526280 DCP1BQ8IZD4 617 aaKnown RBP13.82□□□□□ -0.2
SMPD1-202ENST00000526280 C12orf76Q8N812 135 aaPredicted RBP13.82□□□□□ -0.2
SMPD1-202ENST00000526280 SMRP1Q8NCR6 262 aa13.82□□□□□ -0.2
SMPD1-202ENST00000526280 PKMYT1Q99640 499 aa13.82□□□□□ -0.2
SMPD1-202ENST00000526280 NDST4Q9H3R1 872 aa13.82□□□□□ -0.2
SMPD1-202ENST00000526280 SFXN1Q9H9B4 322 aa13.82□□□□□ -0.2
SMPD1-202ENST00000526280 THEGQ9P2T0 379 aa13.82□□□□□ -0.2
SMPD1-202ENST00000526280 CD207Q9UJ71 328 aa13.82□□□□□ -0.2
SMPD1-202ENST00000526280 GTPBP10A4D1E9 387 aaKnown RBP13.81□□□□□ -0.2
SMPD1-202ENST00000526280 MTMR11A4FU01 709 aa13.81□□□□□ -0.2
SMPD1-202ENST00000526280 LRRC10BA6NIK2 292 aa13.81□□□□□ -0.2
SMPD1-202ENST00000526280 ATP2C2O75185 946 aa13.81□□□□□ -0.2
SMPD1-202ENST00000526280 RFPL2O75678 378 aa13.81□□□□□ -0.2
SMPD1-202ENST00000526280 ZMYND10O75800 440 aa13.81□□□□□ -0.2
SMPD1-202ENST00000526280 SEC24AO95486 1093 aa13.81□□□□□ -0.2
SMPD1-202ENST00000526280 ELF1P32519 619 aa13.81□□□□□ -0.2
SMPD1-202ENST00000526280 INCA1Q0VD86 236 aa13.81□□□□□ -0.2
SMPD1-202ENST00000526280 KRT31Q15323 416 aa13.81□□□□□ -0.2
SMPD1-202ENST00000526280 CLUL1Q15846 466 aa13.81□□□□□ -0.2
SMPD1-202ENST00000526280 LIN9Q5TKA1 542 aa13.81□□□□□ -0.2
SMPD1-202ENST00000526280 FAM171BQ6P995 826 aa13.81□□□□□ -0.2
SMPD1-202ENST00000526280 CCDC149Q6ZUS6 474 aa13.81□□□□□ -0.2
SMPD1-202ENST00000526280 ATAD1Q8NBU5 361 aa13.81□□□□□ -0.2
SMPD1-202ENST00000526280 CMASQ8NFW8 434 aaPredicted RBP13.81□□□□□ -0.2
SMPD1-202ENST00000526280 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.81□□□□□ -0.2
SMPD1-202ENST00000526280 SLC7A14Q8TBB6 771 aa13.81□□□□□ -0.2
SMPD1-202ENST00000526280 PGLYRP2Q96PD5 576 aa13.81□□□□□ -0.2
SMPD1-202ENST00000526280 SYT15Q9BQS2 421 aa13.81□□□□□ -0.2
SMPD1-202ENST00000526280 ADAM7Q9H2U9 754 aa13.81□□□□□ -0.2
SMPD1-202ENST00000526280 CYP4F11Q9HBI6 524 aa13.81□□□□□ -0.2
SMPD1-202ENST00000526280 TMLHEQ9NVH6 421 aa13.81□□□□□ -0.2
SMPD1-202ENST00000526280 ZDHHC7Q9NXF8 308 aa13.81□□□□□ -0.2
SMPD1-202ENST00000526280 HSFX1Q9UBD0 423 aa13.81□□□□□ -0.2
SMPD1-202ENST00000526280 GTF3C4Q9UKN8 822 aa13.81□□□□□ -0.2
SMPD1-202ENST00000526280 CCDC195A0A1B0GUA6 201 aa13.8□□□□□ -0.2
SMPD1-202ENST00000526280 MYBPHLA2RUH7 354 aa13.8□□□□□ -0.2
SMPD1-202ENST00000526280 SPDYE4A6NLX3 237 aa13.8□□□□□ -0.2
SMPD1-202ENST00000526280 A8MXQ7 604 aa13.8□□□□□ -0.2
SMPD1-202ENST00000526280 PRRG1O14668 218 aa13.8□□□□□ -0.2
SMPD1-202ENST00000526280 C8AP07357 584 aa13.8□□□□□ -0.2
SMPD1-202ENST00000526280 HNRNPA1P09651 372 aaKnown RBP eCLIP13.8□□□□□ -0.2
SMPD1-202ENST00000526280 CDK11BP21127 795 aaKnown RBP13.8□□□□□ -0.2
SMPD1-202ENST00000526280 HOXA9P31269 272 aa13.8□□□□□ -0.2
SMPD1-202ENST00000526280 MRE11P49959 708 aa13.8□□□□□ -0.2
SMPD1-202ENST00000526280 ITIH3Q06033 890 aa13.8□□□□□ -0.2
SMPD1-202ENST00000526280 LRMPQ12912 555 aa13.8□□□□□ -0.2
SMPD1-202ENST00000526280 DUSP4Q13115 394 aa13.8□□□□□ -0.2
SMPD1-202ENST00000526280 CUL2Q13617 745 aa13.8□□□□□ -0.2
SMPD1-202ENST00000526280 NFE2Q16621 373 aaPredicted RBP13.8□□□□□ -0.2
SMPD1-202ENST00000526280 AAK1Q2M2I8 961 aa13.8□□□□□ -0.2
SMPD1-202ENST00000526280 PPM1LQ5SGD2 360 aa13.8□□□□□ -0.2
SMPD1-202ENST00000526280 RARS2Q5T160 578 aaKnown RBP13.8□□□□□ -0.2
SMPD1-202ENST00000526280 GBP6Q6ZN66 633 aa13.8□□□□□ -0.2
SMPD1-202ENST00000526280 UNC93AQ86WB7 457 aa13.8□□□□□ -0.2
SMPD1-202ENST00000526280 C2orf15Q8WU43 125 aaKnown RBP13.8□□□□□ -0.2
SMPD1-202ENST00000526280 ATXN2LQ8WWM7 1075 aaKnown RBP13.8□□□□□ -0.2
SMPD1-202ENST00000526280 NT5C1BQ96P26 610 aa13.8□□□□□ -0.2
SMPD1-202ENST00000526280 ARID3AQ99856 593 aa13.8□□□□□ -0.2
SMPD1-202ENST00000526280 CRACR2AQ9BSW2 395 aa13.8□□□□□ -0.2
SMPD1-202ENST00000526280 APOL5Q9BWW9 433 aa13.8□□□□□ -0.2
SMPD1-202ENST00000526280 INTS2Q9H0H0 1204 aaKnown RBP13.8□□□□□ -0.2
SMPD1-202ENST00000526280 CRISPLD1Q9H336 500 aa13.8□□□□□ -0.2
SMPD1-202ENST00000526280 DPEP3Q9H4B8 488 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms