RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 HPS4Q9NQG7 708 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.12□□□□□ -1.27
CD44-221ENST00000526000 SH2B1Q9NRF2 756 aaPredicted RBP7.12□□□□□ -1.27
CD44-221ENST00000526000 TMLHEQ9NVH6 421 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 CIZ1Q9ULV3 898 aaPredicted RBP7.12□□□□□ -1.27
CD44-221ENST00000526000 MAFFQ9ULX9 164 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 TBX20Q9UMR3 447 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 STK24Q9Y6E0 443 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 ACACBO00763 2458 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 FANCMQ8IYD8 2048 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 CNOT1A5YKK6 2376 aaKnown RBP7.11□□□□□ -1.27
CD44-221ENST00000526000 PIRO00625 290 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 SCAMP3O14828 347 aaKnown RBP7.11□□□□□ -1.27
CD44-221ENST00000526000 XPOTO43592 962 aaKnown RBP7.11□□□□□ -1.27
CD44-221ENST00000526000 HCRTO43612 131 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 TRAK2O60296 914 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 RNF40O75150 1001 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 TOP3BO95985 862 aaKnown RBP7.11□□□□□ -1.27
CD44-221ENST00000526000 ZNF806P0C7X5 589 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 HAPLN1P10915 354 aaPredicted RBP7.11□□□□□ -1.27
CD44-221ENST00000526000 TYMPP19971 482 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 CYP3A5P20815 502 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 ACAT1P24752 427 aaKnown RBP7.11□□□□□ -1.27
CD44-221ENST00000526000 CNR2P34972 360 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 TUFMP49411 452 aaKnown RBP7.11□□□□□ -1.27
CD44-221ENST00000526000 AARSP49588 968 aaKnown RBP eCLIP7.11□□□□□ -1.27
CD44-221ENST00000526000 NCKAP1LP55160 1127 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 HMGN5P82970 282 aaKnown RBP7.11□□□□□ -1.27
CD44-221ENST00000526000 CREB5Q02930 508 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 GRIN1Q05586 938 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 GRSF1Q12849 480 aaKnown RBP eCLIP7.11□□□□□ -1.27
CD44-221ENST00000526000 BFSP1Q12934 665 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 CCINQ13939 588 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 MYBPC2Q14324 1141 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 TMEM132DQ14C87 1099 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 CCDC142Q17RM4 750 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 ADALQ6DHV7 355 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 CACNA2D4Q7Z3S7 1137 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 SCN4BQ8IWT1 228 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 CMTM8Q8IZV2 173 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 ZSWIM2Q8NEG5 633 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 GAB3Q8WWW8 586 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 FAM83CQ9BQN1 747 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 ZCWPW1Q9H0M4 648 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 LINC00597Q9H2U6 94 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 DPP3Q9NY33 737 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 TBC1D7Q9P0N9 293 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 LARSQ9P2J5 1176 aaKnown RBP7.11□□□□□ -1.27
CD44-221ENST00000526000 ASB3Q9Y575 518 aa7.11□□□□□ -1.27
CD44-221ENST00000526000 EPG5Q9HCE0 2579 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 A0A0B4J269 797 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 ANO9A1A5B4 782 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 GOLGA8IPA6NC78 632 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 GOLGA8JA6NMD2 632 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 C4orf47A7E2U8 309 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 H3BQV1 296 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 LRP3O75074 770 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 KCNK5O95279 499 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 F11P03951 625 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 CYP2F1P24903 491 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 CDC25CP30307 473 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 GBP1P32455 592 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 AVPR1AP37288 418 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 UBA7P41226 1012 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 DGKEP52429 567 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 MLLT6P55198 1093 aaPredicted RBP7.1□□□□□ -1.27
CD44-221ENST00000526000 SEC13P55735 322 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 NLRP12P59046 1061 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 TFAMQ00059 246 aaKnown RBP7.1□□□□□ -1.27
CD44-221ENST00000526000 PLCB2Q00722 1185 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 KARSQ15046 597 aaKnown RBP7.1□□□□□ -1.27
CD44-221ENST00000526000 UAP1L1Q3KQV9 507 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 PLK5Q496M5 336 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 TMEM119Q4V9L6 283 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 TMEM196Q5HYL7 178 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 RNF43Q68DV7 783 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 PSAPL1Q6NUJ1 521 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 CC2D1AQ6P1N0 951 aaPredicted RBP7.1□□□□□ -1.27
CD44-221ENST00000526000 DYMQ7RTS9 669 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 TMEM150AQ86TG1 271 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 CCDC33Q8N5R6 958 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 RASSF8Q8NHQ8 419 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 RPLP0P6Q8NHW5 317 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 MRPS31Q92665 395 aaKnown RBP7.1□□□□□ -1.27
CD44-221ENST00000526000 SNX21Q969T3 373 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 ERLEC1Q96DZ1 483 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 SLC22A12Q96S37 553 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 P2RY13Q9BPV8 354 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 IER2Q9BTL4 223 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 TIPINQ9BVW5 301 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 OXCT2Q9BYC2 517 aaPredicted RBP7.1□□□□□ -1.27
CD44-221ENST00000526000 PANK2Q9BZ23 570 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 TPSD1Q9BZJ3 242 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 TDP1Q9NUW8 608 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 KCNG1Q9UIX4 513 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 CPSF3Q9UKF6 684 aaKnown RBP7.1□□□□□ -1.27
CD44-221ENST00000526000 GTF3C4Q9UKN8 822 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 ANGPTL2Q9UKU9 493 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 WNT6Q9Y6F9 365 aa7.1□□□□□ -1.27
CD44-221ENST00000526000 KPNA7A9QM74 516 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms