RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 PYM1Q9BRP8 204 aaKnown RBP18.52■□□□□ 0.56
TSKU-202ENST00000525167 RBM12Q9NTZ6 932 aaKnown RBP18.52■□□□□ 0.56
TSKU-202ENST00000525167 DPP3Q9NY33 737 aa18.52■□□□□ 0.56
TSKU-202ENST00000525167 SMC3Q9UQE7 1217 aa18.52■□□□□ 0.56
TSKU-202ENST00000525167 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.52■□□□□ 0.56
TSKU-202ENST00000525167 ANKRD63C9JTQ0 380 aa18.51■□□□□ 0.55
TSKU-202ENST00000525167 HRO43593 1189 aa18.51■□□□□ 0.55
TSKU-202ENST00000525167 IL18RAPO95256 599 aa18.51■□□□□ 0.55
TSKU-202ENST00000525167 HAPLN1P10915 354 aaPredicted RBP18.51■□□□□ 0.55
TSKU-202ENST00000525167 DDIT3P35638 169 aa18.51■□□□□ 0.55
TSKU-202ENST00000525167 PNPLA4P41247 253 aa18.51■□□□□ 0.55
TSKU-202ENST00000525167 POSTNQ15063 836 aa18.51■□□□□ 0.55
TSKU-202ENST00000525167 TAF12Q16514 161 aa18.51■□□□□ 0.55
TSKU-202ENST00000525167 CSRP2Q16527 193 aa18.51■□□□□ 0.55
TSKU-202ENST00000525167 LPAL2Q16609 132 aa18.51■□□□□ 0.55
TSKU-202ENST00000525167 WDR44Q5JSH3 913 aa18.51■□□□□ 0.55
TSKU-202ENST00000525167 Q6ZS52 159 aa18.51■□□□□ 0.55
TSKU-202ENST00000525167 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.51■□□□□ 0.55
TSKU-202ENST00000525167 KRI1Q8N9T8 703 aaKnown RBP18.51■□□□□ 0.55
TSKU-202ENST00000525167 ZFYVE19Q96K21 471 aa18.51■□□□□ 0.55
TSKU-202ENST00000525167 ZNF560Q96MR9 790 aa18.51■□□□□ 0.55
TSKU-202ENST00000525167 SEMA4GQ9NTN9 838 aa18.51■□□□□ 0.55
TSKU-202ENST00000525167 SEL1LQ9UBV2 794 aa18.51■□□□□ 0.55
TSKU-202ENST00000525167 KIF26AQ9ULI4 1882 aaPredicted RBP18.5■□□□□ 0.55
TSKU-202ENST00000525167 KPNA7A9QM74 516 aa18.5■□□□□ 0.55
TSKU-202ENST00000525167 SLC30A4O14863 429 aa18.5■□□□□ 0.55
TSKU-202ENST00000525167 CYP4F8P98187 520 aa18.5■□□□□ 0.55
TSKU-202ENST00000525167 DMWDQ09019 674 aa18.5■□□□□ 0.55
TSKU-202ENST00000525167 PON2Q15165 354 aa18.5■□□□□ 0.55
TSKU-202ENST00000525167 ZC2HC1CQ53FD0 456 aaPredicted RBP18.5■□□□□ 0.55
TSKU-202ENST00000525167 LARP1BQ659C4 914 aaKnown RBP18.5■□□□□ 0.55
TSKU-202ENST00000525167 ZNF720Q7Z2F6 126 aa18.5■□□□□ 0.55
TSKU-202ENST00000525167 WDR5BQ86VZ2 330 aa18.5■□□□□ 0.55
TSKU-202ENST00000525167 CMTM8Q8IZV2 173 aa18.5■□□□□ 0.55
TSKU-202ENST00000525167 SLC46A2Q9BY10 475 aa18.5■□□□□ 0.55
TSKU-202ENST00000525167 KIF9Q9HAQ2 790 aa18.5■□□□□ 0.55
TSKU-202ENST00000525167 ANK1P16157 1881 aa18.5■□□□□ 0.55
TSKU-202ENST00000525167 CCDC163A0A0D9SF12 145 aa18.49■□□□□ 0.55
TSKU-202ENST00000525167 AVPR1AP37288 418 aa18.49■□□□□ 0.55
TSKU-202ENST00000525167 AMPD2Q01433 879 aa18.49■□□□□ 0.55
TSKU-202ENST00000525167 TNK2Q07912 1038 aa18.49■□□□□ 0.55
TSKU-202ENST00000525167 NFE2Q16621 373 aaPredicted RBP18.49■□□□□ 0.55
TSKU-202ENST00000525167 WSCD1Q658N2 575 aa18.49■□□□□ 0.55
TSKU-202ENST00000525167 CRELD2Q6UXH1 353 aaPredicted RBP18.49■□□□□ 0.55
TSKU-202ENST00000525167 PRR23CQ6ZRP0 262 aa18.49■□□□□ 0.55
TSKU-202ENST00000525167 LRRTM3Q86VH5 581 aa18.49■□□□□ 0.55
TSKU-202ENST00000525167 GPIHBP1Q8IV16 184 aa18.49■□□□□ 0.55
TSKU-202ENST00000525167 LEO1Q8WVC0 666 aaPredicted RBP18.49■□□□□ 0.55
TSKU-202ENST00000525167 POMGNT1Q8WZA1 660 aa18.49■□□□□ 0.55
TSKU-202ENST00000525167 FAM83CQ9BQN1 747 aa18.49■□□□□ 0.55
TSKU-202ENST00000525167 ABI2Q9NYB9 513 aaPredicted RBP18.49■□□□□ 0.55
TSKU-202ENST00000525167 STK17AQ9UEE5 414 aa18.49■□□□□ 0.55
TSKU-202ENST00000525167 PCDHB5Q9Y5E4 795 aa18.49■□□□□ 0.55
TSKU-202ENST00000525167 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.49■□□□□ 0.55
TSKU-202ENST00000525167 TISP43B9A030 160 aa18.48■□□□□ 0.55
TSKU-202ENST00000525167 PPP1R37O75864 691 aa18.48■□□□□ 0.55
TSKU-202ENST00000525167 F11P03951 625 aa18.48■□□□□ 0.55
TSKU-202ENST00000525167 CSH1P0DML2 217 aa18.48■□□□□ 0.55
TSKU-202ENST00000525167 CSH2P0DML3 217 aa18.48■□□□□ 0.55
TSKU-202ENST00000525167 NLRP12P59046 1061 aa18.48■□□□□ 0.55
TSKU-202ENST00000525167 TSPY1Q01534 308 aa18.48■□□□□ 0.55
TSKU-202ENST00000525167 GRIN1Q05586 938 aa18.48■□□□□ 0.55
TSKU-202ENST00000525167 SF3A1Q15459 793 aaKnown RBP18.48■□□□□ 0.55
TSKU-202ENST00000525167 EFCAB13Q8IY85 973 aa18.48■□□□□ 0.55
TSKU-202ENST00000525167 TTC8Q8TAM2 541 aa18.48■□□□□ 0.55
TSKU-202ENST00000525167 STRA6Q9BX79 667 aa18.48■□□□□ 0.55
TSKU-202ENST00000525167 ABCB6Q9NP58 842 aa18.48■□□□□ 0.55
TSKU-202ENST00000525167 GKN1Q9NS71 199 aa18.48■□□□□ 0.55
TSKU-202ENST00000525167 EXOC7Q9UPT5 735 aa18.48■□□□□ 0.55
TSKU-202ENST00000525167 SCN1AP35498 2009 aa18.48■□□□□ 0.55
TSKU-202ENST00000525167 DCDC2BA2VCK2 349 aa18.47■□□□□ 0.55
TSKU-202ENST00000525167 ATG13O75143 517 aa18.47■□□□□ 0.55
TSKU-202ENST00000525167 CD2BP2O95400 341 aaKnown RBP18.47■□□□□ 0.55
TSKU-202ENST00000525167 HMGA1P17096 107 aaKnown RBP18.47■□□□□ 0.55
TSKU-202ENST00000525167 GAP43P17677 238 aa18.47■□□□□ 0.55
TSKU-202ENST00000525167 ADSSP30520 456 aa18.47■□□□□ 0.55
TSKU-202ENST00000525167 GRSF1Q12849 480 aaKnown RBP eCLIP18.47■□□□□ 0.55
TSKU-202ENST00000525167 BFSP1Q12934 665 aa18.47■□□□□ 0.55
TSKU-202ENST00000525167 RUNX3Q13761 415 aa18.47■□□□□ 0.55
TSKU-202ENST00000525167 ZNF268Q14587 947 aaPredicted RBP18.47■□□□□ 0.55
TSKU-202ENST00000525167 TMEM196Q5HYL7 178 aa18.47■□□□□ 0.55
TSKU-202ENST00000525167 CEP68Q76N32 757 aa18.47■□□□□ 0.55
TSKU-202ENST00000525167 TMEM150AQ86TG1 271 aa18.47■□□□□ 0.55
TSKU-202ENST00000525167 SFR1Q86XK3 245 aa18.47■□□□□ 0.55
TSKU-202ENST00000525167 FAM160A2Q8N612 972 aaPredicted RBP18.47■□□□□ 0.55
TSKU-202ENST00000525167 SPATA18Q8TC71 538 aa18.47■□□□□ 0.55
TSKU-202ENST00000525167 GIPC2Q8TF65 315 aa18.47■□□□□ 0.55
TSKU-202ENST00000525167 DDX1Q92499 740 aaKnown RBP18.47■□□□□ 0.55
TSKU-202ENST00000525167 EXOC4Q96A65 974 aa18.47■□□□□ 0.55
TSKU-202ENST00000525167 LOXL4Q96JB6 756 aa18.47■□□□□ 0.55
TSKU-202ENST00000525167 UPF2Q9HAU5 1272 aaKnown RBP18.47■□□□□ 0.55
TSKU-202ENST00000525167 TDP1Q9NUW8 608 aa18.47■□□□□ 0.55
TSKU-202ENST00000525167 CCDC39Q9UFE4 941 aa18.47■□□□□ 0.55
TSKU-202ENST00000525167 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.46■□□□□ 0.55
TSKU-202ENST00000525167 TRDMT1O14717 391 aaKnown RBP18.46■□□□□ 0.55
TSKU-202ENST00000525167 LDHAP00338 332 aaKnown RBP18.46■□□□□ 0.55
TSKU-202ENST00000525167 ADRB1P08588 477 aa18.46■□□□□ 0.55
TSKU-202ENST00000525167 SRSF5Q13243 272 aaKnown RBP18.46■□□□□ 0.55
TSKU-202ENST00000525167 HEATR6Q6AI08 1181 aaKnown RBP18.46■□□□□ 0.55
TSKU-202ENST00000525167 MON1AQ86VX9 555 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms