RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 LIMS2Q7Z4I7 341 aa13.51□□□□□ -0.25
SMCO4-202ENST00000525141 CBWD2Q8IUF1 395 aa13.51□□□□□ -0.25
SMCO4-202ENST00000525141 MAML2Q8IZL2 1156 aaPredicted RBP13.51□□□□□ -0.25
SMCO4-202ENST00000525141 ZNF687Q8N1G0 1237 aa13.51□□□□□ -0.25
SMCO4-202ENST00000525141 CSGALNACT2Q8N6G5 542 aa13.51□□□□□ -0.25
SMCO4-202ENST00000525141 OR5B17Q8NGF7 314 aa13.51□□□□□ -0.25
SMCO4-202ENST00000525141 SCFD1Q8WVM8 642 aa13.51□□□□□ -0.25
SMCO4-202ENST00000525141 CCDC47Q96A33 483 aaKnown RBP13.51□□□□□ -0.25
SMCO4-202ENST00000525141 IRF2BPLQ9H1B7 796 aa13.51□□□□□ -0.25
SMCO4-202ENST00000525141 TRPV4Q9HBA0 871 aa13.51□□□□□ -0.25
SMCO4-202ENST00000525141 RBAKQ9NYW8 714 aaPredicted RBP13.51□□□□□ -0.25
SMCO4-202ENST00000525141 HOOK1Q9UJC3 728 aaKnown RBP13.51□□□□□ -0.25
SMCO4-202ENST00000525141 PTPRZ1P23471 2315 aaPredicted RBP13.51□□□□□ -0.25
SMCO4-202ENST00000525141 F5P12259 2224 aa13.51□□□□□ -0.25
SMCO4-202ENST00000525141 RIF1Q5UIP0 2472 aaKnown RBP13.5□□□□□ -0.25
SMCO4-202ENST00000525141 UBE4BO95155 1302 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 HCRTO43612 131 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 KINO60870 393 aaKnown RBP13.5□□□□□ -0.25
SMCO4-202ENST00000525141 RHOBTB3O94955 611 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 CST3P01034 146 aaPredicted RBP13.5□□□□□ -0.25
SMCO4-202ENST00000525141 ITGB3P05106 788 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 ATF6P18850 670 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 POLR2BP30876 1174 aaKnown RBP13.5□□□□□ -0.25
SMCO4-202ENST00000525141 NBL1P41271 181 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 EPHB3P54753 998 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 SNRPFP62306 86 aaKnown RBP13.5□□□□□ -0.25
SMCO4-202ENST00000525141 GRM2Q14416 872 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 KCNB1Q14721 858 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 ANGPT1Q15389 498 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 MLF2Q15773 248 aaPredicted RBP13.5□□□□□ -0.25
SMCO4-202ENST00000525141 KMT5BQ4FZB7 885 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 STXBP5Q5T5C0 1151 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 LMBRD2Q68DH5 695 aaPredicted RBP13.5□□□□□ -0.25
SMCO4-202ENST00000525141 VITQ6UXI7 678 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 ASCL5Q7RTU5 278 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 OSTM1Q86WC4 334 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 GPD1LQ8N335 351 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 PDCL2Q8N4E4 241 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 ZNF516Q92618 1163 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 SMARCD2Q92925 531 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 PSMG2Q969U7 264 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 GBP4Q96PP9 640 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 PKMYT1Q99640 499 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 LPIN3Q9BQK8 851 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 GZF1Q9H116 711 aaPredicted RBP13.5□□□□□ -0.25
SMCO4-202ENST00000525141 IL21Q9HBE4 155 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 ZFP14Q9HCL3 533 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 EXOC1Q9NV70 894 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 HSFX1Q9UBD0 423 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 L1RE1Q9UN81 338 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 DMDP11532 3685 aa13.5□□□□□ -0.25
SMCO4-202ENST00000525141 TSC2P49815 1807 aa13.49□□□□□ -0.25
SMCO4-202ENST00000525141 A0A1W2PRU2 124 aa13.49□□□□□ -0.25
SMCO4-202ENST00000525141 KANSL1LA0AUZ9 987 aa13.49□□□□□ -0.25
SMCO4-202ENST00000525141 FAM170BA6NMN3 283 aa13.49□□□□□ -0.25
SMCO4-202ENST00000525141 CLIC2O15247 247 aa13.49□□□□□ -0.25
SMCO4-202ENST00000525141 HAPLN1P10915 354 aaPredicted RBP13.49□□□□□ -0.25
SMCO4-202ENST00000525141 ALDH1A3P47895 512 aa13.49□□□□□ -0.25
SMCO4-202ENST00000525141 CLCN6P51797 869 aa13.49□□□□□ -0.25
SMCO4-202ENST00000525141 PRKCQQ04759 706 aa13.49□□□□□ -0.25
SMCO4-202ENST00000525141 STK4Q13043 487 aa13.49□□□□□ -0.25
SMCO4-202ENST00000525141 BMT2Q1RMZ1 405 aa13.49□□□□□ -0.25
SMCO4-202ENST00000525141 FRMD5Q7Z6J6 570 aa13.49□□□□□ -0.25
SMCO4-202ENST00000525141 TMEM150AQ86TG1 271 aa13.49□□□□□ -0.25
SMCO4-202ENST00000525141 THEM5Q8N1Q8 247 aa13.49□□□□□ -0.25
SMCO4-202ENST00000525141 ELMOD1Q8N336 334 aa13.49□□□□□ -0.25
SMCO4-202ENST00000525141 PJA1Q8NG27 643 aa13.49□□□□□ -0.25
SMCO4-202ENST00000525141 SPATA20Q8TB22 786 aa13.49□□□□□ -0.25
SMCO4-202ENST00000525141 ZSCAN18Q8TBC5 510 aaPredicted RBP13.49□□□□□ -0.25
SMCO4-202ENST00000525141 GIPC2Q8TF65 315 aa13.49□□□□□ -0.25
SMCO4-202ENST00000525141 CACTINQ8WUQ7 758 aaKnown RBP13.49□□□□□ -0.25
SMCO4-202ENST00000525141 GSDMAQ96QA5 445 aa13.49□□□□□ -0.25
SMCO4-202ENST00000525141 SLC39A2Q9NP94 309 aa13.49□□□□□ -0.25
SMCO4-202ENST00000525141 ASAH2Q9NR71 780 aa13.49□□□□□ -0.25
SMCO4-202ENST00000525141 HEBP1Q9NRV9 189 aa13.49□□□□□ -0.25
SMCO4-202ENST00000525141 INTS13Q9NVM9 706 aa13.49□□□□□ -0.25
SMCO4-202ENST00000525141 GDAP2Q9NXN4 497 aa13.49□□□□□ -0.25
SMCO4-202ENST00000525141 HSPBP1Q9NZL4 362 aa13.49□□□□□ -0.25
SMCO4-202ENST00000525141 DSEQ9UL01 958 aa13.49□□□□□ -0.25
SMCO4-202ENST00000525141 ASB3Q9Y575 518 aa13.49□□□□□ -0.25
SMCO4-202ENST00000525141 WDR87Q6ZQQ6 2873 aa13.48□□□□□ -0.25
SMCO4-202ENST00000525141 VPS13AQ96RL7 3174 aa13.48□□□□□ -0.25
SMCO4-202ENST00000525141 MYO15AQ9UKN7 3530 aa13.48□□□□□ -0.25
SMCO4-202ENST00000525141 ZNF233A6NK53 670 aa13.48□□□□□ -0.25
SMCO4-202ENST00000525141 TULP1O00294 542 aaPredicted RBP13.48□□□□□ -0.25
SMCO4-202ENST00000525141 ARNTLO00327 626 aa13.48□□□□□ -0.25
SMCO4-202ENST00000525141 GABRDO14764 452 aa13.48□□□□□ -0.25
SMCO4-202ENST00000525141 KIAA0391O15091 583 aaKnown RBP13.48□□□□□ -0.25
SMCO4-202ENST00000525141 SMC2O95347 1197 aa13.48□□□□□ -0.25
SMCO4-202ENST00000525141 HMGA1P17096 107 aaKnown RBP13.48□□□□□ -0.25
SMCO4-202ENST00000525141 TUFMP49411 452 aaKnown RBP13.48□□□□□ -0.25
SMCO4-202ENST00000525141 GPR15P49685 360 aa13.48□□□□□ -0.25
SMCO4-202ENST00000525141 RBP5P82980 135 aa13.48□□□□□ -0.25
SMCO4-202ENST00000525141 PNOCQ13519 176 aa13.48□□□□□ -0.25
SMCO4-202ENST00000525141 CCDC142Q17RM4 750 aa13.48□□□□□ -0.25
SMCO4-202ENST00000525141 SOWAHAQ2M3V2 549 aa13.48□□□□□ -0.25
SMCO4-202ENST00000525141 SV2CQ496J9 727 aa13.48□□□□□ -0.25
SMCO4-202ENST00000525141 METTL23Q86XA0 190 aa13.48□□□□□ -0.25
SMCO4-202ENST00000525141 MFSD6LQ8IWD5 586 aa13.48□□□□□ -0.25
SMCO4-202ENST00000525141 RDH13Q8NBN7 331 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms