RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 SYT15Q9BQS2 421 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 ACBD6Q9BR61 282 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 SRRTQ9BXP5 876 aaKnown RBP5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 NIF3L1Q9GZT8 377 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 NAT10Q9H0A0 1025 aaKnown RBP5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 ZCWPW1Q9H0M4 648 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 S1PR5Q9H228 398 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 VRTNQ9H8Y1 702 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 ABCB6Q9NP58 842 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 ASAH2Q9NR71 780 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 ANO10Q9NW15 660 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 HSFX1Q9UBD0 423 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 CDH9Q9ULB4 789 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 USTQ9Y2C2 406 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 YIPF1Q9Y548 306 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 PCDHB5Q9Y5E4 795 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 INSL5Q9Y5Q6 135 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 MTMR11A4FU01 709 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 PES1O00541 588 aaKnown RBP5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 ZNF197O14709 1029 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 P4HA2O15460 535 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 TACC1O75410 805 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 LETM1O95202 739 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 ASS1P00966 412 aaKnown RBP5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 CST3P01034 146 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 WEE2P0C1S8 567 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 PRKCSHP14314 528 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 PTPN2P17706 415 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 BMP6P22004 513 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 SP100P23497 879 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 ACAT1P24752 427 aaKnown RBP5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 ANXA13P27216 316 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 GNL1P36915 607 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 MTIF2P46199 727 aaKnown RBP5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 RPL10AP62906 217 aaKnown RBP5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 CYP27A1Q02318 531 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 ZP2Q05996 745 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 PPP3CAQ08209 521 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 TWF1Q12792 350 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 DUSP4Q13115 394 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 DPCR1Q3MIW9 517 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 ARHGAP15Q53QZ3 475 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 CAVIN1Q6NZI2 390 aaKnown RBP5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 RSPO2Q6UXX9 243 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 PDZD4Q76G19 769 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 GET4Q7L5D6 327 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 GRASPQ7Z6J2 395 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 GJD3Q8N144 294 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 CXorf38Q8TB03 319 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 PLEKHO2Q8TD55 490 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 TAS1R2Q8TE23 839 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 BORCS6Q96GS4 357 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 FUBP3Q96I24 572 aaKnown RBP eCLIP5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 FAXDC2Q96IV6 333 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 CNOT6LQ96LI5 555 aaKnown RBP5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 DUSP9Q99956 384 aaKnown RBP5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 CORO1BQ9BR76 489 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 MED10Q9BTT4 135 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 GZF1Q9H116 711 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 XYLT2Q9H1B5 865 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 POMKQ9H5K3 350 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 THAP9Q9H5L6 903 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 SMYD3Q9H7B4 428 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 CYP3A43Q9HB55 503 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 WDR6Q9NNW5 1121 aaKnown RBP5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 RAB20Q9NX57 234 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 EHD2Q9NZN4 543 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 MRPS23Q9Y3D9 190 aaKnown RBP5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 ASB3Q9Y575 518 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 ZFP37Q9Y6Q3 630 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 CHD9Q3L8U1 2897 aa5.77□□□□□ -1.49
HMGB1P40-201ENST00000525121 TNFRSF10AO00220 468 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 DLL1O00548 723 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 GABRDO14764 452 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 TRIM66O15016 1216 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 SEC24AO95486 1093 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 VNN1O95497 513 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 AFPP02771 609 aaKnown RBP5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 RHOP08100 348 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 PDGFRBP09619 1106 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 MYL4P12829 197 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 TBXAS1P24557 533 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 RAP1GAPP47736 663 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 FMO5P49326 533 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 MARSP56192 900 aaKnown RBP5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 SLC8A3P57103 927 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 PSMC1P62191 440 aaKnown RBP5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 KLHL40Q2TBA0 621 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 SKOR2Q2VWA4 1001 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 CFAP221Q4G0U5 840 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 MDH1BQ5I0G3 518 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 C1orf220Q5T0J3 134 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 VSTM1Q6UX27 236 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 MTSS1LQ765P7 747 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 UNC93AQ86WB7 457 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 TRIM59Q8IWR1 403 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 SCN4BQ8IWT1 228 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 ZDHHC14Q8IZN3 488 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms