RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 GARTP22102 1010 aa12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 PAX3P23760 479 aa12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 MAGEA9P43362 315 aa12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 RPS9P46781 194 aaKnown RBP12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 POU5F1Q01860 360 aaKnown RBP12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 STK38Q15208 465 aa12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 E2F4Q16254 413 aa12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 SV2CQ496J9 727 aa12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 SDHAF4Q5VUM1 108 aa12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 METTL23Q86XA0 190 aa12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 ARID3BQ8IVW6 561 aaPredicted RBP12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 SYCP3Q8IZU3 236 aa12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 PDCL2Q8N4E4 241 aa12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 SUMF1Q8NBK3 374 aa12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 TTC8Q8TAM2 541 aa12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 FAM200AQ8TCP9 573 aa12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 FAM3CQ92520 227 aa12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 ZNF560Q96MR9 790 aa12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 MTMR12Q9C0I1 747 aa12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 SMG9Q9H0W8 520 aaKnown RBP12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 ZSCAN16Q9H4T2 348 aaPredicted RBP12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 PDE11AQ9HCR9 933 aa12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 TRPV5Q9NQA5 729 aa12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 ABI2Q9NYB9 513 aaPredicted RBP12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 HSFX1Q9UBD0 423 aa12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 SIX4Q9UIU6 781 aa12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 FBXO4Q9UKT5 387 aa12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 DSEQ9UL01 958 aa12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 AGAP1Q9UPQ3 857 aa12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 EXOC7Q9UPT5 735 aa12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 ASB3Q9Y575 518 aa12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 EML5Q05BV3 1969 aa12.74□□□□□ -0.37
CLNS1A-202ENST00000525064 RALGAPA1Q6GYQ0 2036 aa12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 SLC38A8A6NNN8 435 aa12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 SPTLC2O15270 562 aa12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 EXTL3O43909 919 aa12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 TDGF1P13385 188 aa12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 ACAT1P24752 427 aaKnown RBP12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 CCNE1P24864 410 aa12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 HOXD13P35453 343 aa12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 FCHO2Q0JRZ9 810 aa12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 BFSP1Q12934 665 aa12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 GAS6Q14393 721 aa12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 ZNF528Q3MIS6 628 aa12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 FOXD4L6Q3SYB3 417 aaPredicted RBP12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 ZC3H14Q6PJT7 736 aaKnown RBP12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 TXNDC11Q6PKC3 985 aa12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 FOXD4L3Q6VB84 417 aaPredicted RBP12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 TMEM150AQ86TG1 271 aa12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 NT5DC4Q86YG4 428 aa12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 THEM5Q8N1Q8 247 aa12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 SPPL2BQ8TCT7 592 aa12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 DHX58Q96C10 678 aa12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 PI4K2AQ9BTU6 479 aa12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 GPR88Q9GZN0 384 aa12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 CHRDQ9H2X0 955 aa12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 SEMA4AQ9H3S1 761 aa12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 RBM12Q9NTZ6 932 aaKnown RBP12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 MRPS17Q9Y2R5 130 aaKnown RBP12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 PCDHB13Q9Y5F0 798 aa12.73□□□□□ -0.37
CLNS1A-202ENST00000525064 MAN2B1O00754 1011 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 CHADO15335 359 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 NCAM2O15394 837 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 KINO60870 393 aaKnown RBP12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 TADA3O75528 432 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 CHRNB1P11230 501 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 HMGA1P17096 107 aaKnown RBP12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 CASP1P29466 404 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 HOXC13P31276 330 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 TUFMP49411 452 aaKnown RBP12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 ALCAMQ13740 583 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 VEPH1Q14D04 833 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 SHC4Q6S5L8 630 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 ITIH5Q86UX2 942 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 CBWD2Q8IUF1 395 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 CCDC65Q8IXS2 484 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 YAF2Q8IY57 180 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 KIAA2013Q8IYS2 634 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 GPD1LQ8N335 351 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 CSGALNACT2Q8N6G5 542 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 ZBTB44Q8NCP5 570 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 OR5B17Q8NGF7 314 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 RIN3Q8TB24 985 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 NELL1Q92832 810 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 NELL2Q99435 816 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 PKMYT1Q99640 499 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 TRIM9Q9C026 710 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 TNMDQ9H2S6 317 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 LMAN1LQ9HAT1 526 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 KBTBD4Q9NVX7 518 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 DDX43Q9NXZ2 648 aaKnown RBP12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 GTSE1Q9NYZ3 720 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 DNAH14Q0VDD8 3507 aa12.72□□□□□ -0.37
CLNS1A-202ENST00000525064 LILRB5O75023 590 aa12.71□□□□□ -0.37
CLNS1A-202ENST00000525064 PPP6R2O75170 966 aa12.71□□□□□ -0.37
CLNS1A-202ENST00000525064 LDHAP00338 332 aaKnown RBP12.71□□□□□ -0.37
CLNS1A-202ENST00000525064 F11P03951 625 aa12.71□□□□□ -0.37
CLNS1A-202ENST00000525064 KRT19P08727 400 aa12.71□□□□□ -0.37
CLNS1A-202ENST00000525064 TMEM191BP0C7N4 346 aa12.71□□□□□ -0.37
CLNS1A-202ENST00000525064 CDC25CP30307 473 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms