RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 STRIP2Q9ULQ0 834 aa16.18■□□□□ 0.18
BEST1-204ENST00000524926 GOLGA8SH3BPF8 625 aa16.18■□□□□ 0.18
BEST1-204ENST00000524926 PPEF2O14830 753 aa16.18■□□□□ 0.18
BEST1-204ENST00000524926 VDRP11473 427 aa16.18■□□□□ 0.18
BEST1-204ENST00000524926 PRKCZQ05513 592 aa16.18■□□□□ 0.18
BEST1-204ENST00000524926 DHX34Q14147 1143 aaKnown RBP16.18■□□□□ 0.18
BEST1-204ENST00000524926 ZBTB6Q15916 424 aa16.18■□□□□ 0.18
BEST1-204ENST00000524926 PTPN20Q4JDL3 420 aa16.18■□□□□ 0.18
BEST1-204ENST00000524926 TAF2Q6P1X5 1199 aa16.18■□□□□ 0.18
BEST1-204ENST00000524926 CCDC137Q6PK04 289 aaKnown RBP16.18■□□□□ 0.18
BEST1-204ENST00000524926 TSEN2Q8NCE0 465 aaKnown RBP16.18■□□□□ 0.18
BEST1-204ENST00000524926 CYTH4Q9UIA0 394 aa16.18■□□□□ 0.18
BEST1-204ENST00000524926 TCRBV5S1A1TA0A578 114 aa16.17■□□□□ 0.18
BEST1-204ENST00000524926 M0QYV0 167 aa16.17■□□□□ 0.18
BEST1-204ENST00000524926 PSTPIP1O43586 416 aa16.17■□□□□ 0.18
BEST1-204ENST00000524926 MICAL2O94851 1124 aa16.17■□□□□ 0.18
BEST1-204ENST00000524926 ALDH1A1P00352 501 aa16.17■□□□□ 0.18
BEST1-204ENST00000524926 RARBP10826 455 aa16.17■□□□□ 0.18
BEST1-204ENST00000524926 HOXC8P31273 242 aa16.17■□□□□ 0.18
BEST1-204ENST00000524926 GGCXP38435 758 aa16.17■□□□□ 0.18
BEST1-204ENST00000524926 TRIM32Q13049 653 aa16.17■□□□□ 0.18
BEST1-204ENST00000524926 NBPF20Q3BBV1 942 aa16.17■□□□□ 0.18
BEST1-204ENST00000524926 SGO2Q562F6 1265 aa16.17■□□□□ 0.18
BEST1-204ENST00000524926 FAM47CQ5HY64 1035 aa16.17■□□□□ 0.18
BEST1-204ENST00000524926 ZFYVE27Q5T4F4 411 aa16.17■□□□□ 0.18
BEST1-204ENST00000524926 ALKAL1Q6UXT8 129 aa16.17■□□□□ 0.18
BEST1-204ENST00000524926 EIF1ADQ8N9N8 165 aaKnown RBP16.17■□□□□ 0.18
BEST1-204ENST00000524926 C3orf20Q8ND61 904 aa16.17■□□□□ 0.18
BEST1-204ENST00000524926 SMC1BQ8NDV3 1235 aa16.17■□□□□ 0.18
BEST1-204ENST00000524926 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.17■□□□□ 0.18
BEST1-204ENST00000524926 NT5C1AQ9BXI3 368 aa16.17■□□□□ 0.18
BEST1-204ENST00000524926 RNF39Q9H2S5 420 aa16.17■□□□□ 0.18
BEST1-204ENST00000524926 MED4Q9NPJ6 270 aa16.17■□□□□ 0.18
BEST1-204ENST00000524926 CNTN3Q9P232 1028 aa16.17■□□□□ 0.18
BEST1-204ENST00000524926 TJP2Q9UDY2 1190 aa16.17■□□□□ 0.18
BEST1-204ENST00000524926 M0QZ92 97 aa16.17■□□□□ 0.18
BEST1-204ENST00000524926 AARSP49588 968 aaKnown RBP eCLIP16.17■□□□□ 0.18
BEST1-204ENST00000524926 PSMC1P62191 440 aaKnown RBP16.17■□□□□ 0.18
BEST1-204ENST00000524926 TAP1Q03518 808 aa16.17■□□□□ 0.18
BEST1-204ENST00000524926 INCA1Q0VD86 236 aa16.17■□□□□ 0.18
BEST1-204ENST00000524926 CCDC105Q8IYK2 499 aa16.17■□□□□ 0.18
BEST1-204ENST00000524926 TTC39CQ8N584 583 aa16.17■□□□□ 0.18
BEST1-204ENST00000524926 RIN2Q8WYP3 895 aaPredicted RBP16.17■□□□□ 0.18
BEST1-204ENST00000524926 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.17■□□□□ 0.18
BEST1-204ENST00000524926 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.17■□□□□ 0.18
BEST1-204ENST00000524926 SCN1AP35498 2009 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 SMIM28A0A1B0GU29 152 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 FAM187AA6NFU0 413 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 FSCN2O14926 492 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 ECHS1P30084 290 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 MAN1A1P33908 653 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 GABPB1Q06547 395 aaPredicted RBP16.16■□□□□ 0.18
BEST1-204ENST00000524926 CNGA2Q16280 664 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 UBXN11Q5T124 520 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 TWF2Q6IBS0 349 aaKnown RBP16.16■□□□□ 0.18
BEST1-204ENST00000524926 TTC27Q6P3X3 843 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 SESTD1Q86VW0 696 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 JAMLQ86YT9 394 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 UBA3Q8TBC4 463 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 HHIPL1Q96JK4 782 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 CPXM1Q96SM3 734 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 ERP44Q9BS26 406 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 FAM114A2Q9NRY5 505 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 VPS18Q9P253 973 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 RASAL2Q9UJF2 1139 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 UBQLN1Q9UMX0 589 aaKnown RBP16.16■□□□□ 0.18
BEST1-204ENST00000524926 BHMG1C9JSJ3 638 aaPredicted RBP16.16■□□□□ 0.18
BEST1-204ENST00000524926 F8VP50 259 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 SEPT4O43236 478 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 HSF2BPO75031 334 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 SYF2O95926 243 aaKnown RBP16.16■□□□□ 0.18
BEST1-204ENST00000524926 HMGCRP04035 888 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 KRT3P12035 628 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 OGDHQ02218 1023 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 SIX1Q15475 284 aaPredicted RBP16.16■□□□□ 0.18
BEST1-204ENST00000524926 PPP1R15BQ5SWA1 713 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 FAM71BQ8TC56 605 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 MRPL45Q9BRJ2 306 aaKnown RBP16.16■□□□□ 0.18
BEST1-204ENST00000524926 HEMGNQ9BXL5 484 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 NEUROG2Q9H2A3 272 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 PCYOX1Q9UHG3 505 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 GTF2IRD1Q9UHL9 959 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 PTPN22Q9Y2R2 807 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 IPPQ9Y573 584 aa16.16■□□□□ 0.18
BEST1-204ENST00000524926 AGPSO00116 658 aa16.15■□□□□ 0.18
BEST1-204ENST00000524926 ATF7P17544 494 aaPredicted RBP16.15■□□□□ 0.18
BEST1-204ENST00000524926 COILP38432 576 aaPredicted RBP16.15■□□□□ 0.18
BEST1-204ENST00000524926 KCNJ1P48048 391 aa16.15■□□□□ 0.18
BEST1-204ENST00000524926 GYS2P54840 703 aa16.15■□□□□ 0.18
BEST1-204ENST00000524926 CACNB2Q08289 660 aaPredicted RBP16.15■□□□□ 0.18
BEST1-204ENST00000524926 ZNF252P-AS1Q0IIN9 211 aa16.15■□□□□ 0.18
BEST1-204ENST00000524926 C9orf57Q5W0N0 161 aa16.15■□□□□ 0.18
BEST1-204ENST00000524926 GDF6Q6KF10 455 aaPredicted RBP16.15■□□□□ 0.18
BEST1-204ENST00000524926 FAM228AQ86W67 206 aa16.15■□□□□ 0.18
BEST1-204ENST00000524926 LRRC52Q8N7C0 313 aa16.15■□□□□ 0.18
BEST1-204ENST00000524926 C12orf29Q8N999 325 aa16.15■□□□□ 0.18
BEST1-204ENST00000524926 C1orf54Q8WWF1 131 aa16.15■□□□□ 0.18
BEST1-204ENST00000524926 SEC14L1Q92503 715 aa16.15■□□□□ 0.18
BEST1-204ENST00000524926 FAN1Q9Y2M0 1017 aa16.15■□□□□ 0.18
BEST1-204ENST00000524926 CDY2AQ9Y6F7 541 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms