RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 PHLPP1O60346 1717 aa2.36□□□□□ -2.03
CD44-212ENST00000524922 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.36□□□□□ -2.03
CD44-212ENST00000524922 ASXL1Q8IXJ9 1541 aa2.36□□□□□ -2.03
CD44-212ENST00000524922 WASHC2CQ9Y4E1 1318 aa2.36□□□□□ -2.03
CD44-212ENST00000524922 CDC42BPAQ5VT25 1732 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 FAM171A2A8MVW0 826 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 E9PLN8 166 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 FZD9O00144 591 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 YY2O15391 372 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 HAUS5O94927 633 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 LATS1O95835 1130 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 CELA2AP08217 269 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 ALAS1P13196 640 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 KCNA2P16389 499 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 LPOP22079 712 aaPredicted RBP2.35□□□□□ -2.03
CD44-212ENST00000524922 GRIA3P42263 894 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 SLC5A3P53794 718 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 PER3P56645 1201 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 TMPRSS15P98073 1019 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 PTPRRQ15256 657 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 TXNRD1Q16881 649 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 GIMAP6Q6P9H5 292 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.35□□□□□ -2.03
CD44-212ENST00000524922 TSHZ1Q6ZSZ6 1077 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 KRT26Q7Z3Y9 468 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 COLGALT2Q8IYK4 626 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 ADGRG5Q8IZF4 528 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 IL17RDQ8NFM7 739 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 SLC30A5Q8TAD4 765 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 MYCBPAPQ8TBZ2 947 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 TBC1D15Q8TC07 691 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 NRG4Q8WWG1 115 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 RAB24Q969Q5 203 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 AHCYL2Q96HN2 611 aaKnown RBP2.35□□□□□ -2.03
CD44-212ENST00000524922 VKORC1Q9BQB6 163 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 ADI1Q9BV57 179 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 C11orf54Q9H0W9 315 aaPredicted RBP2.35□□□□□ -2.03
CD44-212ENST00000524922 KMT5AQ9NQR1 393 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 LRIT1Q9P2V4 623 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 ZNF70Q9UC06 446 aaPredicted RBP2.35□□□□□ -2.03
CD44-212ENST00000524922 SLC45A2Q9UMX9 530 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 EHBP1L1Q8N3D4 1523 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 DUOX2Q9NRD8 1548 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 SETBP1Q9Y6X0 1596 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 PNPLA6Q8IY17 1366 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 CCNB3Q8WWL7 1395 aa2.35□□□□□ -2.03
CD44-212ENST00000524922 ABCC5O15440 1437 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 SLIT2O94813 1529 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 TRGV11A0A075B6L2 103 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 TLDC2A0PJX2 215 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 PRSS29PA6NIE9 313 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 LINC00473A8K010 186 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 GRM6O15303 877 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 PEX1O43933 1283 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 PCDHGA12O60330 932 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 SLC43A1O75387 559 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 AGFG2O95081 481 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 ERBB2P04626 1255 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 SOX5P35711 763 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 ABCG1P45844 678 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 ZNF280AP59817 542 aaPredicted RBP2.34□□□□□ -2.03
CD44-212ENST00000524922 DYRK1AQ13627 763 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 FAM180AQ6UWF9 173 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 MICALCLQ6ZW33 695 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 SPATS2Q86XZ4 545 aaKnown RBP2.34□□□□□ -2.03
CD44-212ENST00000524922 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.34□□□□□ -2.03
CD44-212ENST00000524922 TMIEQ8NEW7 156 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 CHAC2Q8WUX2 184 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 TFAP2BQ92481 460 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 RFKQ969G6 155 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 KRTAP1-5Q9BYS1 174 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 INTS13Q9NVM9 706 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 RNF7Q9UBF6 113 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 CFDP1Q9UEE9 299 aaPredicted RBP2.34□□□□□ -2.03
CD44-212ENST00000524922 SERGEFQ9UGK8 458 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 LIMCH1Q9UPQ0 1083 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 MTO1Q9Y2Z2 717 aaKnown RBP2.34□□□□□ -2.03
CD44-212ENST00000524922 PCDHB1Q9Y5F3 818 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 PCDHGA9Q9Y5G4 932 aaKnown RBP2.34□□□□□ -2.03
CD44-212ENST00000524922 PCDHGA8Q9Y5G5 932 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 PCDHGA7Q9Y5G6 932 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 PCDHGA6Q9Y5G7 932 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 PCDHGA3Q9Y5H0 932 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 ADGRB2O60241 1585 aa2.34□□□□□ -2.03
CD44-212ENST00000524922 AFF2P51816 1311 aa2.34□□□□□ -2.04
CD44-212ENST00000524922 MST1RQ04912 1400 aa2.34□□□□□ -2.04
CD44-212ENST00000524922 ADGRL3Q9HAR2 1447 aa2.34□□□□□ -2.04
CD44-212ENST00000524922 TRPM2O94759 1503 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 MANSC4A6NHS7 340 aaPredicted RBP2.33□□□□□ -2.04
CD44-212ENST00000524922 NT5C1B-RDH14C9J2C7 533 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 KIAA0391O15091 583 aaKnown RBP2.33□□□□□ -2.04
CD44-212ENST00000524922 C5AR1P21730 350 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 HSD3B2P26439 372 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 TOB1P50616 345 aaPredicted RBP2.33□□□□□ -2.04
CD44-212ENST00000524922 ANXA11P50995 505 aaKnown RBP2.33□□□□□ -2.04
CD44-212ENST00000524922 POU6F2P78424 691 aaPredicted RBP2.33□□□□□ -2.04
CD44-212ENST00000524922 CDC42EP1Q00587 391 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 TLE1Q04724 770 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 TCF15Q12870 199 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 FAPQ12884 760 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms