RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 IGSF1Q8N6C5 1336 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 MYBBP1AQ9BQG0 1328 aaKnown RBP3.86□□□□□ -1.79
CSDE1-208ENST00000524652 COL11A2P13942 1736 aaPredicted RBP3.86□□□□□ -1.79
CSDE1-208ENST00000524652 CACNA1AO00555 2505 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 TAF1LQ8IZX4 1826 aa3.86□□□□□ -1.79
CSDE1-208ENST00000524652 PCNTO95613 3336 aa3.85□□□□□ -1.79
CSDE1-208ENST00000524652 PAPPAQ13219 1627 aa3.85□□□□□ -1.79
CSDE1-208ENST00000524652 NHSQ6T4R5 1651 aa3.85□□□□□ -1.79
CSDE1-208ENST00000524652 LY75O60449 1722 aa3.85□□□□□ -1.79
CSDE1-208ENST00000524652 KDM3BQ7LBC6 1761 aa3.85□□□□□ -1.79
CSDE1-208ENST00000524652 UBR2Q8IWV8 1755 aa3.85□□□□□ -1.79
CSDE1-208ENST00000524652 GOLGA8AA7E2F4 631 aa3.85□□□□□ -1.79
CSDE1-208ENST00000524652 WNT10BO00744 389 aa3.85□□□□□ -1.79
CSDE1-208ENST00000524652 POMCP01189 267 aa3.85□□□□□ -1.79
CSDE1-208ENST00000524652 RAP2AP10114 183 aa3.85□□□□□ -1.79
CSDE1-208ENST00000524652 MCAMP43121 646 aa3.85□□□□□ -1.79
CSDE1-208ENST00000524652 ALDH1A3P47895 512 aa3.85□□□□□ -1.79
CSDE1-208ENST00000524652 CCT2P78371 535 aaKnown RBP3.85□□□□□ -1.79
CSDE1-208ENST00000524652 PPP3CAQ08209 521 aa3.85□□□□□ -1.79
CSDE1-208ENST00000524652 MGAT2Q10469 447 aa3.85□□□□□ -1.79
CSDE1-208ENST00000524652 MEX3CQ5U5Q3 659 aaKnown RBP3.85□□□□□ -1.79
CSDE1-208ENST00000524652 FBXO42Q6P3S6 717 aa3.85□□□□□ -1.79
CSDE1-208ENST00000524652 SEM1Q6ZVN7 128 aa3.85□□□□□ -1.79
CSDE1-208ENST00000524652 GPR149Q86SP6 731 aa3.85□□□□□ -1.79
CSDE1-208ENST00000524652 AFAP1L2Q8N4X5 818 aa3.85□□□□□ -1.79
CSDE1-208ENST00000524652 FAM98AQ8NCA5 519 aaKnown RBP3.85□□□□□ -1.79
CSDE1-208ENST00000524652 TGFBRAP1Q8WUH2 860 aa3.85□□□□□ -1.79
CSDE1-208ENST00000524652 SLKQ9H2G2 1235 aaPredicted RBP3.85□□□□□ -1.79
CSDE1-208ENST00000524652 TMEM140Q9NV12 185 aa3.85□□□□□ -1.79
CSDE1-208ENST00000524652 TBCCD1Q9NVR7 557 aa3.85□□□□□ -1.79
CSDE1-208ENST00000524652 USP35Q9P2H5 1018 aa3.85□□□□□ -1.79
CSDE1-208ENST00000524652 TESQ9UGI8 421 aaKnown RBP3.85□□□□□ -1.79
CSDE1-208ENST00000524652 ZBTB21Q9ULJ3 1066 aa3.85□□□□□ -1.79
CSDE1-208ENST00000524652 TUBGCP6Q96RT7 1819 aa3.85□□□□□ -1.79
CSDE1-208ENST00000524652 KDRP35968 1356 aa3.85□□□□□ -1.79
CSDE1-208ENST00000524652 OVOS2A0A0G2JMS6 1433 aa3.85□□□□□ -1.79
CSDE1-208ENST00000524652 UNC79Q9P2D8 2635 aa3.85□□□□□ -1.79
CSDE1-208ENST00000524652 C5P01031 1676 aa3.84□□□□□ -1.79
CSDE1-208ENST00000524652 ANP32CO43423 234 aa3.84□□□□□ -1.79
CSDE1-208ENST00000524652 C1RP00736 705 aa3.84□□□□□ -1.79
CSDE1-208ENST00000524652 HMOX1P09601 288 aa3.84□□□□□ -1.79
CSDE1-208ENST00000524652 FGFR4P22455 802 aa3.84□□□□□ -1.79
CSDE1-208ENST00000524652 LMO1P25800 156 aa3.84□□□□□ -1.79
CSDE1-208ENST00000524652 SLC5A3P53794 718 aa3.84□□□□□ -1.79
CSDE1-208ENST00000524652 CXADRP78310 365 aa3.84□□□□□ -1.79
CSDE1-208ENST00000524652 UBXN2BQ14CS0 331 aa3.84□□□□□ -1.79
CSDE1-208ENST00000524652 LRCH2Q5VUJ6 765 aa3.84□□□□□ -1.79
CSDE1-208ENST00000524652 ZKSCAN2Q63HK3 967 aa3.84□□□□□ -1.79
CSDE1-208ENST00000524652 Q6ZNX1 250 aa3.84□□□□□ -1.79
CSDE1-208ENST00000524652 TOM1L2Q6ZVM7 507 aa3.84□□□□□ -1.79
CSDE1-208ENST00000524652 STRA8Q7Z7C7 330 aa3.84□□□□□ -1.79
CSDE1-208ENST00000524652 CMIPQ8IY22 773 aa3.84□□□□□ -1.79
CSDE1-208ENST00000524652 BOLLQ8N9W6 283 aaKnown RBP3.84□□□□□ -1.79
CSDE1-208ENST00000524652 FBXO18Q8NFZ0 1043 aa3.84□□□□□ -1.79
CSDE1-208ENST00000524652 CHAC2Q8WUX2 184 aa3.84□□□□□ -1.79
CSDE1-208ENST00000524652 CYFIP2Q96F07 1278 aa3.84□□□□□ -1.79
CSDE1-208ENST00000524652 Q96MF0 132 aa3.84□□□□□ -1.79
CSDE1-208ENST00000524652 ZSWIM1Q9BR11 485 aa3.84□□□□□ -1.79
CSDE1-208ENST00000524652 DUSP26Q9BV47 211 aa3.84□□□□□ -1.79
CSDE1-208ENST00000524652 ADI1Q9BV57 179 aa3.84□□□□□ -1.79
CSDE1-208ENST00000524652 GALNT9Q9HCQ5 603 aa3.84□□□□□ -1.79
CSDE1-208ENST00000524652 DMRT3Q9NQL9 472 aa3.84□□□□□ -1.79
CSDE1-208ENST00000524652 AJAP1Q9UKB5 411 aaPredicted RBP3.84□□□□□ -1.79
CSDE1-208ENST00000524652 TLK1Q9UKI8 766 aa3.84□□□□□ -1.79
CSDE1-208ENST00000524652 SIK3Q9Y2K2 1263 aa3.84□□□□□ -1.79
CSDE1-208ENST00000524652 TNS2Q63HR2 1409 aa3.84□□□□□ -1.79
CSDE1-208ENST00000524652 RREB1Q92766 1687 aa3.84□□□□□ -1.8
CSDE1-208ENST00000524652 COL5A3P25940 1745 aaPredicted RBP3.84□□□□□ -1.8
CSDE1-208ENST00000524652 A0A0C4DFX4 3053 aa3.84□□□□□ -1.8
CSDE1-208ENST00000524652 MYH14Q7Z406 1995 aaKnown RBP3.83□□□□□ -1.8
CSDE1-208ENST00000524652 MYADML2A6NDP7 307 aa3.83□□□□□ -1.8
CSDE1-208ENST00000524652 FAM171A2A8MVW0 826 aa3.83□□□□□ -1.8
CSDE1-208ENST00000524652 GPANK1O95872 356 aa3.83□□□□□ -1.8
CSDE1-208ENST00000524652 ALAS1P13196 640 aa3.83□□□□□ -1.8
CSDE1-208ENST00000524652 CPEP16870 476 aa3.83□□□□□ -1.8
CSDE1-208ENST00000524652 ZNF37AP17032 561 aaPredicted RBP3.83□□□□□ -1.8
CSDE1-208ENST00000524652 SCAND1P57086 179 aa3.83□□□□□ -1.8
CSDE1-208ENST00000524652 SIM1P81133 766 aaPredicted RBP3.83□□□□□ -1.8
CSDE1-208ENST00000524652 HNRNPA0Q13151 305 aaKnown RBP3.83□□□□□ -1.8
CSDE1-208ENST00000524652 STAT4Q14765 748 aa3.83□□□□□ -1.8
CSDE1-208ENST00000524652 ZNF169Q14929 603 aaPredicted RBP3.83□□□□□ -1.8
CSDE1-208ENST00000524652 TOR2AQ5JU69 321 aa3.83□□□□□ -1.8
CSDE1-208ENST00000524652 ZNF772Q68DY9 489 aaPredicted RBP3.83□□□□□ -1.8
CSDE1-208ENST00000524652 ZNF529Q6P280 563 aa3.83□□□□□ -1.8
CSDE1-208ENST00000524652 UBR7Q8N806 425 aa3.83□□□□□ -1.8
CSDE1-208ENST00000524652 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.83□□□□□ -1.8
CSDE1-208ENST00000524652 PNISRQ8TF01 805 aaKnown RBP3.83□□□□□ -1.8
CSDE1-208ENST00000524652 RNF31Q96EP0 1072 aa3.83□□□□□ -1.8
CSDE1-208ENST00000524652 PLEKHF1Q96S99 279 aa3.83□□□□□ -1.8
CSDE1-208ENST00000524652 RSAD1Q9HA92 442 aa3.83□□□□□ -1.8
CSDE1-208ENST00000524652 C14orf119Q9NWQ9 140 aa3.83□□□□□ -1.8
CSDE1-208ENST00000524652 SLC23A1Q9UHI7 598 aa3.83□□□□□ -1.8
CSDE1-208ENST00000524652 TRPC5Q9UL62 973 aaPredicted RBP3.83□□□□□ -1.8
CSDE1-208ENST00000524652 KDM6AO15550 1401 aaPredicted RBP3.83□□□□□ -1.8
CSDE1-208ENST00000524652 TJP1Q07157 1748 aa3.83□□□□□ -1.8
CSDE1-208ENST00000524652 NUP188Q5SRE5 1749 aa3.83□□□□□ -1.8
CSDE1-208ENST00000524652 LAMB4A4D0S4 1761 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 RGPD3A6NKT7 1758 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-208ENST00000524652 RGPD4Q7Z3J3 1758 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 MRC1P22897 1456 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms