RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 LRRC3Q9BY71 257 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 CYP4F11Q9HBI6 524 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 TMEM8AQ9HCN3 771 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 CRTAC1Q9NQ79 661 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 AVENQ9NQS1 362 aaPredicted RBP12.82□□□□□ -0.36
CLN8-207ENST00000524258 HCFC1R1Q9NWW0 138 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 DDX43Q9NXZ2 648 aaKnown RBP12.82□□□□□ -0.36
CLN8-207ENST00000524258 HSFX1Q9UBD0 423 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 RWDD2AQ9UIY3 292 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 INSL5Q9Y5Q6 135 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 DENND4AQ7Z401 1863 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 MYBPHLA2RUH7 354 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 C2CD4DB7Z1M9 353 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 PMM2O15305 246 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 ATP2C2O75185 946 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 MOSPD3O75425 235 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 EPB41P11171 864 aaKnown RBP12.81□□□□□ -0.36
CLN8-207ENST00000524258 KRT13P13646 458 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 ACAT1P24752 427 aaKnown RBP12.81□□□□□ -0.36
CLN8-207ENST00000524258 LHX1P48742 406 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 CDR1P51861 262 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 CDH8P55286 799 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 NLRP12P59046 1061 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 BIRC3Q13489 604 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 TRPC3Q13507 836 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 SGSM1Q2NKQ1 1148 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 SLC39A12Q504Y0 691 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 INTS6LQ5JSJ4 861 aaKnown RBP12.81□□□□□ -0.36
CLN8-207ENST00000524258 LIN9Q5TKA1 542 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 ELMSAN1Q6PJG2 1045 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 GRASPQ7Z6J2 395 aaPredicted RBP12.81□□□□□ -0.36
CLN8-207ENST00000524258 TRIM59Q8IWR1 403 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 THEM5Q8N1Q8 247 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 TAF4BQ92750 862 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 MYADMQ96S97 322 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 LPIN3Q9BQK8 851 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 PI4K2AQ9BTU6 479 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 BCO2Q9BYV7 579 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 SMYD3Q9H7B4 428 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 USTQ9Y2C2 406 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 SLC27A5Q9Y2P5 690 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 YIPF1Q9Y548 306 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 CLUHO75153 1309 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 DOCK8Q8NF50 2099 aa12.81□□□□□ -0.36
CLN8-207ENST00000524258 BICDL2A1A5D9 508 aa12.8□□□□□ -0.36
CLN8-207ENST00000524258 DLL1O00548 723 aa12.8□□□□□ -0.36
CLN8-207ENST00000524258 PHACTR2O75167 634 aa12.8□□□□□ -0.36
CLN8-207ENST00000524258 SOAT2O75908 522 aa12.8□□□□□ -0.36
CLN8-207ENST00000524258 HAPLN1P10915 354 aaPredicted RBP12.8□□□□□ -0.36
CLN8-207ENST00000524258 CCR2P41597 374 aa12.8□□□□□ -0.36
CLN8-207ENST00000524258 ASPAP45381 313 aa12.8□□□□□ -0.36
CLN8-207ENST00000524258 EPHA5P54756 1037 aa12.8□□□□□ -0.36
CLN8-207ENST00000524258 SMARCB1Q12824 385 aa12.8□□□□□ -0.36
CLN8-207ENST00000524258 SLC5A9Q2M3M2 681 aa12.8□□□□□ -0.36
CLN8-207ENST00000524258 ZNF699Q32M78 642 aa12.8□□□□□ -0.36
CLN8-207ENST00000524258 PRSS36Q5K4E3 855 aa12.8□□□□□ -0.36
CLN8-207ENST00000524258 KRT39Q6A163 491 aa12.8□□□□□ -0.36
CLN8-207ENST00000524258 ZDHHC14Q8IZN3 488 aa12.8□□□□□ -0.36
CLN8-207ENST00000524258 LMO3Q8TAP4 145 aa12.8□□□□□ -0.36
CLN8-207ENST00000524258 RPGRIP1Q96KN7 1286 aa12.8□□□□□ -0.36
CLN8-207ENST00000524258 SRRTQ9BXP5 876 aaKnown RBP12.8□□□□□ -0.36
CLN8-207ENST00000524258 TMEM63CQ9P1W3 806 aa12.8□□□□□ -0.36
CLN8-207ENST00000524258 NXF1Q9UBU9 619 aaKnown RBP12.8□□□□□ -0.36
CLN8-207ENST00000524258 ARMCX3Q9UH62 379 aaPredicted RBP12.8□□□□□ -0.36
CLN8-207ENST00000524258 GTF3C4Q9UKN8 822 aa12.8□□□□□ -0.36
CLN8-207ENST00000524258 TNFRSF10AO00220 468 aa12.79□□□□□ -0.36
CLN8-207ENST00000524258 PRRG1O14668 218 aa12.79□□□□□ -0.36
CLN8-207ENST00000524258 RHOP08100 348 aa12.79□□□□□ -0.36
CLN8-207ENST00000524258 PDGFRBP09619 1106 aa12.79□□□□□ -0.36
CLN8-207ENST00000524258 ATF6P18850 670 aa12.79□□□□□ -0.36
CLN8-207ENST00000524258 ELF1P32519 619 aa12.79□□□□□ -0.36
CLN8-207ENST00000524258 GNL1P36915 607 aaPredicted RBP12.79□□□□□ -0.36
CLN8-207ENST00000524258 RAP1GAPP47736 663 aa12.79□□□□□ -0.36
CLN8-207ENST00000524258 MXI1P50539 228 aa12.79□□□□□ -0.36
CLN8-207ENST00000524258 MYL7Q01449 175 aa12.79□□□□□ -0.36
CLN8-207ENST00000524258 TWF1Q12792 350 aa12.79□□□□□ -0.36
CLN8-207ENST00000524258 ZNF667Q5HYK9 610 aa12.79□□□□□ -0.36
CLN8-207ENST00000524258 TMC8Q8IU68 726 aa12.79□□□□□ -0.36
CLN8-207ENST00000524258 RNF135Q8IUD6 432 aa12.79□□□□□ -0.36
CLN8-207ENST00000524258 DCP1BQ8IZD4 617 aaKnown RBP12.79□□□□□ -0.36
CLN8-207ENST00000524258 HS6ST3Q8IZP7 471 aa12.79□□□□□ -0.36
CLN8-207ENST00000524258 ITFG1Q8TB96 612 aa12.79□□□□□ -0.36
CLN8-207ENST00000524258 SPPL2BQ8TCT7 592 aa12.79□□□□□ -0.36
CLN8-207ENST00000524258 WHAMMQ8TF30 809 aa12.79□□□□□ -0.36
CLN8-207ENST00000524258 C2orf15Q8WU43 125 aaKnown RBP12.79□□□□□ -0.36
CLN8-207ENST00000524258 MMS19Q96T76 1030 aa12.79□□□□□ -0.36
CLN8-207ENST00000524258 SYT15Q9BQS2 421 aa12.79□□□□□ -0.36
CLN8-207ENST00000524258 DPEP3Q9H4B8 488 aa12.79□□□□□ -0.36
CLN8-207ENST00000524258 METTL14Q9HCE5 456 aaKnown RBP12.79□□□□□ -0.36
CLN8-207ENST00000524258 TMEM30AQ9NV96 361 aa12.79□□□□□ -0.36
CLN8-207ENST00000524258 CDH9Q9ULB4 789 aa12.79□□□□□ -0.36
CLN8-207ENST00000524258 GOLGA6L22H0YM25 854 aa12.78□□□□□ -0.36
CLN8-207ENST00000524258 XYLBO75191 536 aa12.78□□□□□ -0.36
CLN8-207ENST00000524258 MBD3O95983 291 aa12.78□□□□□ -0.36
CLN8-207ENST00000524258 SP100P23497 879 aaPredicted RBP12.78□□□□□ -0.36
CLN8-207ENST00000524258 ERCC5P28715 1186 aaPredicted RBP12.78□□□□□ -0.36
CLN8-207ENST00000524258 PCSK1P29120 753 aa12.78□□□□□ -0.36
CLN8-207ENST00000524258 PIK3CAP42336 1068 aa12.78□□□□□ -0.36
CLN8-207ENST00000524258 FMO5P49326 533 aa12.78□□□□□ -0.36
CLN8-207ENST00000524258 PSMC1P62191 440 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms