RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-225	ENST00000524141	PYROXD1	Q8WU10	500 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	CHURC1	Q8WUH1	139 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	PAFAH2	Q99487	392 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	C11orf70	Q9BRQ4	267 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	RANBP17	Q9H2T7	1088 aa	Known RBP	10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	ACSS3	Q9H6R3	686 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	KANSL3	Q9P2N6	904 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	POLI	Q9UNA4	740 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	UST	Q9Y2C2	406 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	SLX4	Q8IY92	1834 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141		F8W8V4	182 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	TLR3	O15455	904 aa	Known RBP	10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	TBX10	O75333	385 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	KRT1	P04264	644 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	ECE1	P42892	770 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	CACNA2D1	P54289	1103 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	ARL4C	P56559	192 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	NOMO3	P69849	1222 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	OVGP1	Q12889	678 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	OASL	Q15646	514 aa	Known RBP	10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	KAZN	Q674X7	775 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	FAM196A	Q6ZSG2	479 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	PHLDB2	Q86SQ0	1253 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	ZNF276	Q8N554	614 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	PDCD7	Q8N8D1	485 aa	Known RBP	10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	SMC1B	Q8NDV3	1235 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	TMEM161B	Q8NDZ6	487 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	RNF217	Q8TC41	542 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	NRG4	Q8WWG1	115 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	GATA6	Q92908	595 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	MRRF	Q96E11	262 aa	Known RBP	10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	DHRS4	Q9BTZ2	278 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	PPP1R12C	Q9BZL4	782 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	KCNH7	Q9NS40	1196 aa		10.8	□□□□□ -0.68
SPIDR-225	ENST00000524141	KLRG2	A4D1S0	409 aa	Predicted RBP	10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	SMAP	O00193	183 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	ZSCAN5DP	P0CG00	497 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	RARB	P10826	455 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	TSHR	P16473	764 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	GLRA2	P23416	452 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	SERPINB3	P29508	390 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	PIK3CA	P42336	1068 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	PPP1R15B	Q5SWA1	713 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	LLGL2	Q6P1M3	1020 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	GPD1L	Q8N335	351 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	FEZF2	Q8TBJ5	459 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	POMGNT1	Q8WZA1	660 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	TMEM120A	Q9BXJ8	343 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	TAS2R1	Q9NYW7	299 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	NUMBL	Q9Y6R0	609 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	WDR91	A4D1P6	747 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	SGK1	O00141	431 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	KRT10	P13645	584 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	ITGB5	P18084	799 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	RAP1GDS1	P52306	607 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	GPX6	P59796	221 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	NOP14	P78316	857 aa	Known RBP	10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	DOK7	Q18PE1	504 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	FAM102B	Q5T8I3	360 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	C6orf163	Q5TEZ5	329 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	NLRX1	Q86UT6	975 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	PPIL6	Q8IXY8	311 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	C4orf19	Q8IY42	314 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	ABRA	Q8N0Z2	381 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	GBP5	Q96PP8	586 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	PI4K2A	Q9BTU6	479 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	PIDD1	Q9HB75	910 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	CLUH	O75153	1309 aa		10.79	□□□□□ -0.68
SPIDR-225	ENST00000524141	MYH9	P35579	1960 aa	Known RBP	10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	DENND3	A2RUS2	1198 aa		10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	MAP3K13	O43283	966 aa		10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	MAGEC1	O60732	1142 aa		10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	CALCA	P01258	141 aa		10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	DLD	P09622	509 aa	Known RBP	10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	DSG3	P32926	999 aa		10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	NPTX2	P47972	431 aa		10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	RBM5	P52756	815 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	CUL3	Q13618	768 aa		10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	TFDP1	Q14186	410 aa		10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	C2CD6	Q53TS8	623 aa		10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	TFDP3	Q5H9I0	405 aa		10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	MFSD7	Q6UXD7	560 aa		10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	SPOCD1	Q6ZMY3	1216 aa		10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	C3orf62	Q6ZUJ4	267 aa		10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	ANKMY2	Q8IV38	441 aa		10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	CCDC110	Q8TBZ0	833 aa		10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	MZB1	Q8WU39	189 aa		10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	DEFB129	Q9H1M3	183 aa		10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	C17orf75	Q9HAS0	396 aa		10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	GPRC5C	Q9NQ84	441 aa		10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	DDX43	Q9NXZ2	648 aa	Known RBP	10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	DDX56	Q9NY93	547 aa	Known RBP	10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	DNAJB4	Q9UDY4	337 aa		10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	FARP1	Q9Y4F1	1045 aa	Predicted RBP	10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	IQANK1	A0A1B0GTG1	560 aa		10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	PI4K2B	G5E9Z4	385 aa		10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	DHX15	O43143	795 aa	Known RBP	10.78	□□□□□ -0.68
SPIDR-225	ENST00000524141	LPXN	O60711	386 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms