RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 SMAD4Q13485 552 aaKnown RBP13.73□□□□□ -0.21
VEGFA-224ENST00000523873 ANO6Q4KMQ2 910 aa13.73□□□□□ -0.21
VEGFA-224ENST00000523873 INTS6LQ5JSJ4 861 aaKnown RBP13.73□□□□□ -0.21
VEGFA-224ENST00000523873 PPM1LQ5SGD2 360 aa13.73□□□□□ -0.21
VEGFA-224ENST00000523873 LIN9Q5TKA1 542 aa13.73□□□□□ -0.21
VEGFA-224ENST00000523873 DPH6Q7L8W6 267 aa13.73□□□□□ -0.21
VEGFA-224ENST00000523873 TMEM86AQ8N2M4 240 aa13.73□□□□□ -0.21
VEGFA-224ENST00000523873 ATAD1Q8NBU5 361 aa13.73□□□□□ -0.21
VEGFA-224ENST00000523873 FBXL13Q8NEE6 735 aa13.73□□□□□ -0.21
VEGFA-224ENST00000523873 OR6B3Q8NGW1 331 aa13.73□□□□□ -0.21
VEGFA-224ENST00000523873 TATDN2Q93075 761 aa13.73□□□□□ -0.21
VEGFA-224ENST00000523873 FUCA2Q9BTY2 467 aa13.73□□□□□ -0.21
VEGFA-224ENST00000523873 DPEP3Q9H4B8 488 aa13.73□□□□□ -0.21
VEGFA-224ENST00000523873 THAP9Q9H5L6 903 aa13.73□□□□□ -0.21
VEGFA-224ENST00000523873 RAB20Q9NX57 234 aa13.73□□□□□ -0.21
VEGFA-224ENST00000523873 AFF4Q9UHB7 1163 aaKnown RBP13.73□□□□□ -0.21
VEGFA-224ENST00000523873 SLC27A5Q9Y2P5 690 aa13.73□□□□□ -0.21
VEGFA-224ENST00000523873 NFE2L3Q9Y4A8 694 aa13.73□□□□□ -0.21
VEGFA-224ENST00000523873 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.73□□□□□ -0.211e-11■□□□□ 9.4
VEGFA-224ENST00000523873 MYO16Q9Y6X6 1858 aa13.72□□□□□ -0.21
VEGFA-224ENST00000523873 MYBPHLA2RUH7 354 aa13.72□□□□□ -0.21
VEGFA-224ENST00000523873 PRRG1O14668 218 aa13.72□□□□□ -0.21
VEGFA-224ENST00000523873 TACC1O75410 805 aa13.72□□□□□ -0.21
VEGFA-224ENST00000523873 AFPP02771 609 aaKnown RBP13.72□□□□□ -0.21
VEGFA-224ENST00000523873 ATF2P15336 505 aa13.72□□□□□ -0.21
VEGFA-224ENST00000523873 HOXB8P17481 243 aaPredicted RBP13.72□□□□□ -0.21
VEGFA-224ENST00000523873 ELF1P32519 619 aa13.72□□□□□ -0.21
VEGFA-224ENST00000523873 DUSP4Q13115 394 aa13.72□□□□□ -0.21
VEGFA-224ENST00000523873 GPR17Q13304 367 aa13.72□□□□□ -0.21
VEGFA-224ENST00000523873 CT47A1Q5JQC4 288 aaPredicted RBP13.72□□□□□ -0.21
VEGFA-224ENST00000523873 ENOX1Q8TC92 643 aaKnown RBP13.72□□□□□ -0.21
VEGFA-224ENST00000523873 HDAC7Q8WUI4 952 aa13.72□□□□□ -0.21
VEGFA-224ENST00000523873 TAF4BQ92750 862 aa13.72□□□□□ -0.21
VEGFA-224ENST00000523873 ZNF707Q96C28 371 aaPredicted RBP13.72□□□□□ -0.21
VEGFA-224ENST00000523873 ARID3AQ99856 593 aa13.72□□□□□ -0.21
VEGFA-224ENST00000523873 SYT15Q9BQS2 421 aa13.72□□□□□ -0.21
VEGFA-224ENST00000523873 IMPG2Q9BZV3 1241 aa13.72□□□□□ -0.21
VEGFA-224ENST00000523873 ADAM7Q9H2U9 754 aa13.72□□□□□ -0.21
VEGFA-224ENST00000523873 SNX25Q9H3E2 840 aa13.72□□□□□ -0.21
VEGFA-224ENST00000523873 PLEKHA4Q9H4M7 779 aa13.72□□□□□ -0.21
VEGFA-224ENST00000523873 CRTAC1Q9NQ79 661 aa13.72□□□□□ -0.21
VEGFA-224ENST00000523873 ABI2Q9NYB9 513 aaPredicted RBP13.72□□□□□ -0.21
VEGFA-224ENST00000523873 HMGXB4Q9UGU5 601 aa13.72□□□□□ -0.21
VEGFA-224ENST00000523873 GTF3C4Q9UKN8 822 aa13.72□□□□□ -0.21
VEGFA-224ENST00000523873 ANAPC1Q9H1A4 1944 aa13.72□□□□□ -0.21
VEGFA-224ENST00000523873 PATJQ8NI35 1801 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 A8MXQ7 604 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 KCNJ18B7U540 433 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 BMP1P13497 986 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 SP100P23497 879 aaPredicted RBP13.71□□□□□ -0.21
VEGFA-224ENST00000523873 GNL1P36915 607 aaPredicted RBP13.71□□□□□ -0.21
VEGFA-224ENST00000523873 LHX1P48742 406 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 GPR15P49685 360 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 NTHL1P78549 312 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 TSPY1Q01534 308 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 KCNJ12Q14500 433 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 AAK1Q2M2I8 961 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 TPGS2Q68CL5 300 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 GPR149Q86SP6 731 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 AOPEPQ8N6M6 819 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 CCDC150Q8NCX0 1101 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 SUSD6Q92537 303 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 SMG7Q92540 1137 aaKnown RBP13.71□□□□□ -0.21
VEGFA-224ENST00000523873 NECAB3Q96P71 396 aaPredicted RBP13.71□□□□□ -0.21
VEGFA-224ENST00000523873 PKMYT1Q99640 499 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 ACBD6Q9BR61 282 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 OXCT2Q9BYC2 517 aaPredicted RBP13.71□□□□□ -0.21
VEGFA-224ENST00000523873 BCO2Q9BYV7 579 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 RHOBTB2Q9BYZ6 727 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 NIF3L1Q9GZT8 377 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 POMKQ9H5K3 350 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 PIDD1Q9HB75 910 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 FANCLQ9NW38 375 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 HCFC1R1Q9NWW0 138 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 TAB2Q9NYJ8 693 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 MAGEC2Q9UBF1 373 aaPredicted RBP13.71□□□□□ -0.21
VEGFA-224ENST00000523873 COQ4Q9Y3A0 265 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 YIPF1Q9Y548 306 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 INSL5Q9Y5Q6 135 aa13.71□□□□□ -0.21
VEGFA-224ENST00000523873 SPTBN5Q9NRC6 3674 aaKnown RBP13.7□□□□□ -0.22
VEGFA-224ENST00000523873 N4BP1O75113 896 aaKnown RBP13.7□□□□□ -0.22
VEGFA-224ENST00000523873 C1RP00736 705 aa13.7□□□□□ -0.22
VEGFA-224ENST00000523873 P4HA1P13674 534 aa13.7□□□□□ -0.22
VEGFA-224ENST00000523873 CD58P19256 250 aa13.7□□□□□ -0.22
VEGFA-224ENST00000523873 PCSK1P29120 753 aa13.7□□□□□ -0.22
VEGFA-224ENST00000523873 ITIH3Q06033 890 aa13.7□□□□□ -0.22
VEGFA-224ENST00000523873 TWF1Q12792 350 aa13.7□□□□□ -0.22
VEGFA-224ENST00000523873 NCAPHQ15003 741 aa13.7□□□□□ -0.22
VEGFA-224ENST00000523873 SKOR2Q2VWA4 1001 aaPredicted RBP13.7□□□□□ -0.22
VEGFA-224ENST00000523873 ZSCAN23Q3MJ62 389 aa13.7□□□□□ -0.22
VEGFA-224ENST00000523873 MDH1BQ5I0G3 518 aa13.7□□□□□ -0.22
VEGFA-224ENST00000523873 WDR44Q5JSH3 913 aa13.7□□□□□ -0.22
VEGFA-224ENST00000523873 CES5AQ6NT32 575 aa13.7□□□□□ -0.22
VEGFA-224ENST00000523873 ELMSAN1Q6PJG2 1045 aa13.7□□□□□ -0.22
VEGFA-224ENST00000523873 CCDC149Q6ZUS6 474 aa13.7□□□□□ -0.22
VEGFA-224ENST00000523873 FAM114A1Q8IWE2 563 aa13.7□□□□□ -0.22
VEGFA-224ENST00000523873 TCEAL8Q8IYN2 117 aa13.7□□□□□ -0.22
VEGFA-224ENST00000523873 DCP1BQ8IZD4 617 aaKnown RBP13.7□□□□□ -0.22
VEGFA-224ENST00000523873 STKLD1Q8NE28 680 aa13.7□□□□□ -0.22
VEGFA-224ENST00000523873 CMASQ8NFW8 434 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms