RNA–Protein interactions for RNA: ENST00000523814.5

SPIDR-221, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-221ENST00000523814 ATRIPQ8WXE1 791 aa18.1■□□□□ 0.49
SPIDR-221ENST00000523814 RUBCNQ92622 972 aa18.1■□□□□ 0.49
SPIDR-221ENST00000523814 LPIN3Q9BQK8 851 aa18.1■□□□□ 0.49
SPIDR-221ENST00000523814 IER2Q9BTL4 223 aa18.1■□□□□ 0.49
SPIDR-221ENST00000523814 LRRC27Q9C0I9 530 aa18.1■□□□□ 0.49
SPIDR-221ENST00000523814 TASP1Q9H6P5 420 aa18.1■□□□□ 0.49
SPIDR-221ENST00000523814 LMAN1LQ9HAT1 526 aa18.1■□□□□ 0.49
SPIDR-221ENST00000523814 KBTBD4Q9NVX7 518 aa18.1■□□□□ 0.49
SPIDR-221ENST00000523814 TFIP11Q9UBB9 837 aaKnown RBP18.1■□□□□ 0.49
SPIDR-221ENST00000523814 AGAP1Q9UPQ3 857 aa18.1■□□□□ 0.49
SPIDR-221ENST00000523814 FANCMQ8IYD8 2048 aa18.1■□□□□ 0.49
SPIDR-221ENST00000523814 F5P12259 2224 aa18.09■□□□□ 0.49
SPIDR-221ENST00000523814 GOLGA8IPA6NC78 632 aa18.09■□□□□ 0.49
SPIDR-221ENST00000523814 GOLGA8JA6NMD2 632 aa18.09■□□□□ 0.49
SPIDR-221ENST00000523814 KIAA0391O15091 583 aaKnown RBP18.09■□□□□ 0.49
SPIDR-221ENST00000523814 SPTLC2O15270 562 aa18.09■□□□□ 0.49
SPIDR-221ENST00000523814 PPP6R2O75170 966 aa18.09■□□□□ 0.49
SPIDR-221ENST00000523814 PRPF6O94906 941 aaKnown RBP18.09■□□□□ 0.49
SPIDR-221ENST00000523814 ITGB3P05106 788 aa18.09■□□□□ 0.49
SPIDR-221ENST00000523814 CDC25CP30307 473 aa18.09■□□□□ 0.49
SPIDR-221ENST00000523814 POLR2BP30876 1174 aaKnown RBP18.09■□□□□ 0.49
SPIDR-221ENST00000523814 CDR1P51861 262 aa18.09■□□□□ 0.49
SPIDR-221ENST00000523814 E2F4Q16254 413 aa18.09■□□□□ 0.49
SPIDR-221ENST00000523814 C1orf228Q6PIY5 440 aa18.09■□□□□ 0.49
SPIDR-221ENST00000523814 PDCL2Q8N4E4 241 aa18.09■□□□□ 0.49
SPIDR-221ENST00000523814 CSGALNACT2Q8N6G5 542 aa18.09■□□□□ 0.49
SPIDR-221ENST00000523814 CSGALNACT1Q8TDX6 532 aa18.09■□□□□ 0.49
SPIDR-221ENST00000523814 MSANTD3Q96H12 275 aa18.09■□□□□ 0.49
SPIDR-221ENST00000523814 ACBD6Q9BR61 282 aa18.09■□□□□ 0.49
SPIDR-221ENST00000523814 FAM126AQ9BYI3 521 aaPredicted RBP18.09■□□□□ 0.49
SPIDR-221ENST00000523814 TNMDQ9H2S6 317 aa18.09■□□□□ 0.49
SPIDR-221ENST00000523814 CUEDC2Q9H467 287 aa18.09■□□□□ 0.49
SPIDR-221ENST00000523814 C8orf33Q9H7E9 229 aaPredicted RBP18.09■□□□□ 0.49
SPIDR-221ENST00000523814 PDE11AQ9HCR9 933 aa18.09■□□□□ 0.49
SPIDR-221ENST00000523814 GDAP2Q9NXN4 497 aa18.09■□□□□ 0.49
SPIDR-221ENST00000523814 ITGA11Q9UKX5 1188 aa18.09■□□□□ 0.49
SPIDR-221ENST00000523814 PCDHB5Q9Y5E4 795 aa18.09■□□□□ 0.49
SPIDR-221ENST00000523814 TSC2P49815 1807 aa18.09■□□□□ 0.49
SPIDR-221ENST00000523814 PATJQ8NI35 1801 aa18.09■□□□□ 0.49
SPIDR-221ENST00000523814 COL4A2P08572 1712 aa18.09■□□□□ 0.49
SPIDR-221ENST00000523814 HUS1O60921 280 aa18.08■□□□□ 0.48
SPIDR-221ENST00000523814 LILRB5O75023 590 aa18.08■□□□□ 0.48
SPIDR-221ENST00000523814 CHRNB1P11230 501 aa18.08■□□□□ 0.48
SPIDR-221ENST00000523814 CCNE1P24864 410 aa18.08■□□□□ 0.48
SPIDR-221ENST00000523814 RBP5P82980 135 aa18.08■□□□□ 0.48
SPIDR-221ENST00000523814 FOXK2Q01167 660 aa18.08■□□□□ 0.48
SPIDR-221ENST00000523814 NFE2Q16621 373 aaPredicted RBP18.08■□□□□ 0.48
SPIDR-221ENST00000523814 ARHGAP29Q52LW3 1261 aa18.08■□□□□ 0.48
SPIDR-221ENST00000523814 SCARA3Q6AZY7 606 aa18.08■□□□□ 0.48
SPIDR-221ENST00000523814 CNNM4Q6P4Q7 775 aa18.08■□□□□ 0.48
SPIDR-221ENST00000523814 TMEM86AQ8N2M4 240 aa18.08■□□□□ 0.48
SPIDR-221ENST00000523814 GPD1LQ8N335 351 aa18.08■□□□□ 0.48
SPIDR-221ENST00000523814 GIPC2Q8TF65 315 aa18.08■□□□□ 0.48
SPIDR-221ENST00000523814 ZNF396Q96N95 335 aaPredicted RBP18.08■□□□□ 0.48
SPIDR-221ENST00000523814 SLC46A2Q9BY10 475 aa18.08■□□□□ 0.48
SPIDR-221ENST00000523814 PCIF1Q9H4Z3 704 aa18.08■□□□□ 0.48
SPIDR-221ENST00000523814 TMLHEQ9NVH6 421 aa18.08■□□□□ 0.48
SPIDR-221ENST00000523814 ABI2Q9NYB9 513 aaPredicted RBP18.08■□□□□ 0.48
SPIDR-221ENST00000523814 ZMYM5Q9UJ78 669 aa18.08■□□□□ 0.48
SPIDR-221ENST00000523814 L1RE1Q9UN81 338 aa18.08■□□□□ 0.48
SPIDR-221ENST00000523814 FRYLO94915 3013 aa18.08■□□□□ 0.48
SPIDR-221ENST00000523814 DPYSL4O14531 572 aa18.07■□□□□ 0.48
SPIDR-221ENST00000523814 TDGF1P13385 188 aa18.07■□□□□ 0.48
SPIDR-221ENST00000523814 HMGA1P17096 107 aaKnown RBP18.07■□□□□ 0.48
SPIDR-221ENST00000523814 HOXD13P35453 343 aa18.07■□□□□ 0.48
SPIDR-221ENST00000523814 ID4P47928 161 aa18.07■□□□□ 0.48
SPIDR-221ENST00000523814 KPNA1P52294 538 aaPredicted RBP18.07■□□□□ 0.48
SPIDR-221ENST00000523814 TSPY1Q01534 308 aa18.07■□□□□ 0.48
SPIDR-221ENST00000523814 TAF12Q16514 161 aa18.07■□□□□ 0.48
SPIDR-221ENST00000523814 TSSK4Q6SA08 328 aa18.07■□□□□ 0.48
SPIDR-221ENST00000523814 STXBP4Q6ZWJ1 553 aa18.07■□□□□ 0.48
SPIDR-221ENST00000523814 TMEM150AQ86TG1 271 aa18.07■□□□□ 0.48
SPIDR-221ENST00000523814 SPATA18Q8TC71 538 aa18.07■□□□□ 0.48
SPIDR-221ENST00000523814 LEO1Q8WVC0 666 aaPredicted RBP18.07■□□□□ 0.48
SPIDR-221ENST00000523814 SNX21Q969T3 373 aa18.07■□□□□ 0.48
SPIDR-221ENST00000523814 TRIM9Q9C026 710 aa18.07■□□□□ 0.48
SPIDR-221ENST00000523814 ABCB6Q9NP58 842 aa18.07■□□□□ 0.48
SPIDR-221ENST00000523814 DDX43Q9NXZ2 648 aaKnown RBP18.07■□□□□ 0.48
SPIDR-221ENST00000523814 SIX4Q9UIU6 781 aa18.07■□□□□ 0.48
SPIDR-221ENST00000523814 MYBPHLA2RUH7 354 aa18.06■□□□□ 0.48
SPIDR-221ENST00000523814 SOBPA7XYQ1 873 aa18.06■□□□□ 0.48
SPIDR-221ENST00000523814 TULP1O00294 542 aaPredicted RBP18.06■□□□□ 0.48
SPIDR-221ENST00000523814 PRAMEF12O95522 483 aa18.06■□□□□ 0.48
SPIDR-221ENST00000523814 YEATS4O95619 227 aa18.06■□□□□ 0.48
SPIDR-221ENST00000523814 F11P03951 625 aa18.06■□□□□ 0.48
SPIDR-221ENST00000523814 NRLP54845 237 aa18.06■□□□□ 0.48
SPIDR-221ENST00000523814 NLRP12P59046 1061 aa18.06■□□□□ 0.48
SPIDR-221ENST00000523814 CYP4F8P98187 520 aa18.06■□□□□ 0.48
SPIDR-221ENST00000523814 AMPD3Q01432 767 aa18.06■□□□□ 0.48
SPIDR-221ENST00000523814 RALGPS2Q86X27 583 aaPredicted RBP18.06■□□□□ 0.48
SPIDR-221ENST00000523814 KIAA2013Q8IYS2 634 aa18.06■□□□□ 0.48
SPIDR-221ENST00000523814 CMTM8Q8IZV2 173 aa18.06■□□□□ 0.48
SPIDR-221ENST00000523814 TOP6BLQ8N6T0 577 aa18.06■□□□□ 0.48
SPIDR-221ENST00000523814 IQUBQ8NA54 791 aa18.06■□□□□ 0.48
SPIDR-221ENST00000523814 GLIS3Q8NEA6 775 aa18.06■□□□□ 0.48
SPIDR-221ENST00000523814 BPIFB1Q8TDL5 484 aa18.06■□□□□ 0.48
SPIDR-221ENST00000523814 HPS3Q969F9 1004 aa18.06■□□□□ 0.48
SPIDR-221ENST00000523814 FAM84AQ96KN4 292 aa18.06■□□□□ 0.48
SPIDR-221ENST00000523814 GCNAQ96QF7 691 aa18.06■□□□□ 0.48
SPIDR-221ENST00000523814 PKMYT1Q99640 499 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms