RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	RBM12	Q9NTZ6	932 aa	Known RBP	5.74	□□□□□ -1.49
SREK1-213	ENST00000523655	DNM3	Q9UQ16	869 aa		5.74	□□□□□ -1.49
SREK1-213	ENST00000523655	DAAM1	Q9Y4D1	1078 aa		5.74	□□□□□ -1.49
SREK1-213	ENST00000523655	DHX29	Q7Z478	1369 aa	Known RBP	5.74	□□□□□ -1.49
SREK1-213	ENST00000523655	TET3	O43151	1660 aa		5.74	□□□□□ -1.49
SREK1-213	ENST00000523655	WASHC2A	Q641Q2	1341 aa		5.74	□□□□□ -1.49
SREK1-213	ENST00000523655	GAGE12B	A1L429	117 aa		5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	GAGE12H	A6NDE8	117 aa		5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	MARCH11	A6NNE9	402 aa		5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	MCAM	P43121	646 aa		5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	SCAP	Q12770	1279 aa		5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	ARHGAP29	Q52LW3	1261 aa		5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	COBLL1	Q53SF7	1204 aa		5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	RRP12	Q5JTH9	1297 aa	Known RBP	5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	B3GNTL1	Q67FW5	361 aa	Predicted RBP	5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	DPY19L2P1	Q6NXN4	242 aa		5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	CLEC4G	Q6UXB4	293 aa		5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	TOGARAM2	Q6ZUX3	1019 aa		5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	GPR149	Q86SP6	731 aa		5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	PNMA8A	Q86V59	439 aa	Predicted RBP	5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	NME8	Q8N427	588 aa		5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	ZGPAT	Q8N5A5	531 aa	Known RBP	5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	SUPT20H	Q8NEM7	779 aa		5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	CCHCR1	Q8TD31	782 aa		5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	TTC17	Q96AE7	1141 aa		5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	RUNDC1	Q96C34	613 aa		5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	HSPBAP1	Q96EW2	488 aa		5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	SENP6	Q9GZR1	1112 aa	Predicted RBP	5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	TOR3A	Q9H497	397 aa		5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	RIOX1	Q9H6W3	641 aa		5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	PPCS	Q9HAB8	311 aa		5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	CASS4	Q9NQ75	786 aa		5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	DDX20	Q9UHI6	824 aa	Known RBP	5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	ATP11B	Q9Y2G3	1177 aa		5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	ATP10D	Q9P241	1426 aa		5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	FRMPD2	Q68DX3	1309 aa	Predicted RBP	5.73	□□□□□ -1.49
SREK1-213	ENST00000523655	NRK	Q7Z2Y5	1582 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	PIPSL	A2A3N6	862 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	TRIM75P	A6NK02	468 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	DIRC3	C9JPN6	131 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	PJA2	O43164	708 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	PCDHGA12	O60330	932 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	PPFIA2	O75334	1257 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	TCEA3	O75764	348 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	AMY1A	P04745	511 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	CFI	P05156	583 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	SNRPA1	P09661	255 aa	Known RBP	5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	ITGAM	P11215	1152 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	SERPINB3	P29508	390 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	GUCY1A2	P33402	732 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	MTNR1B	P49286	362 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	SEC24C	P53992	1094 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	USP14	P54578	494 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	OCA2	Q04671	838 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	MALL	Q13021	153 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	ZNF529	Q6P280	563 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	PGM2L1	Q6PCE3	622 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	MAPKAPK5	Q8IW41	473 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	RHOT2	Q8IXI1	618 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	TMEM132C	Q8N3T6	1108 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	SLC44A3	Q8N4M1	653 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	ENAH	Q8N8S7	591 aa	Predicted RBP	5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	NTN5	Q8WTR8	489 aa	Predicted RBP	5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	CAVIN3	Q969G5	261 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	NAP1L4	Q99733	375 aa	Known RBP	5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	ADI1	Q9BV57	179 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	BCCIP	Q9P287	314 aa	Known RBP eCLIP	5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	PCDHGA9	Q9Y5G4	932 aa	Known RBP	5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	PCDHGA8	Q9Y5G5	932 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	PCDHGA7	Q9Y5G6	932 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	PCDHGA6	Q9Y5G7	932 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	PCDHGA3	Q9Y5H0	932 aa		5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	TRO	Q12816	1431 aa	Predicted RBP	5.72	□□□□□ -1.49
SREK1-213	ENST00000523655	ERVK-7	P63135	1459 aa		5.71	□□□□□ -1.49
SREK1-213	ENST00000523655	PARD3	Q8TEW0	1356 aa		5.71	□□□□□ -1.5
SREK1-213	ENST00000523655	TBX3	O15119	743 aa		5.71	□□□□□ -1.5
SREK1-213	ENST00000523655	RHOBTB3	O94955	611 aa		5.71	□□□□□ -1.5
SREK1-213	ENST00000523655	SPATA31D3	P0C874	917 aa		5.71	□□□□□ -1.5
SREK1-213	ENST00000523655	EGR2	P11161	476 aa	Predicted RBP	5.71	□□□□□ -1.5
SREK1-213	ENST00000523655	ATP5J	P18859	108 aa		5.71	□□□□□ -1.5
SREK1-213	ENST00000523655	FGFR4	P22455	802 aa		5.71	□□□□□ -1.5
SREK1-213	ENST00000523655	HSD11B2	P80365	405 aa		5.71	□□□□□ -1.5
SREK1-213	ENST00000523655	SP140	Q13342	867 aa		5.71	□□□□□ -1.5
SREK1-213	ENST00000523655	UBXN2B	Q14CS0	331 aa		5.71	□□□□□ -1.5
SREK1-213	ENST00000523655	B3GNT9	Q6UX72	402 aa		5.71	□□□□□ -1.5
SREK1-213	ENST00000523655	SPATA31D4	Q6ZUB0	917 aa		5.71	□□□□□ -1.5
SREK1-213	ENST00000523655	MYRIP	Q8NFW9	859 aa		5.71	□□□□□ -1.5
SREK1-213	ENST00000523655	LINC00476	Q8WZB0	136 aa		5.71	□□□□□ -1.5
SREK1-213	ENST00000523655	GJA10	Q969M2	543 aa		5.71	□□□□□ -1.5
SREK1-213	ENST00000523655	RNF31	Q96EP0	1072 aa		5.71	□□□□□ -1.5
SREK1-213	ENST00000523655	PAWR	Q96IZ0	340 aa	Known RBP	5.71	□□□□□ -1.5
SREK1-213	ENST00000523655	ALOXE3	Q9BYJ1	711 aa		5.71	□□□□□ -1.5
SREK1-213	ENST00000523655	C1orf112	Q9NSG2	853 aa		5.71	□□□□□ -1.5
SREK1-213	ENST00000523655	MKS1	Q9NXB0	559 aa		5.71	□□□□□ -1.5
SREK1-213	ENST00000523655	RNF181	Q9P0P0	153 aa		5.71	□□□□□ -1.5
SREK1-213	ENST00000523655	MRFAP1	Q9Y605	127 aa		5.71	□□□□□ -1.5
SREK1-213	ENST00000523655	CLIP1	P30622	1438 aa		5.71	□□□□□ -1.5
SREK1-213	ENST00000523655	RGPD1	P0DJD0	1748 aa		5.71	□□□□□ -1.5

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