RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 SGO2Q562F6 1265 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 OVOS1Q6IE37 1185 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 PSRC1Q6PGN9 363 aaPredicted RBP9.94□□□□□ -0.82
SDCBP-212ENST00000523483 CCDC170Q8IYT3 715 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 RSPH1Q8WYR4 309 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 TMEM169Q96HH4 297 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 PGLYRP2Q96PD5 576 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 C11orf70Q9BRQ4 267 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 BCO2Q9BYV7 579 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 CYP3A43Q9HB55 503 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 ADAM28Q9UKQ2 775 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 PAXBP1Q9Y5B6 917 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 PCDHA13Q9Y5I0 950 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 TRIOBPQ9H2D6 2365 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 TRAPPC3O43617 180 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 RGS7P49802 495 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 CDR2Q01850 454 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 KIF5AQ12840 1032 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 MDH1BQ5I0G3 518 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 C9orf50Q5SZB4 431 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 OSTM1Q86WC4 334 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 SLC4A11Q8NBS3 891 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 C1orf131Q8NDD1 294 aaKnown RBP9.94□□□□□ -0.82
SDCBP-212ENST00000523483 RNPC3Q96LT9 517 aaKnown RBP9.94□□□□□ -0.82
SDCBP-212ENST00000523483 COLEC11Q9BWP8 271 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 GPR62Q9BZJ7 368 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 LUC7LQ9NQ29 371 aaKnown RBP9.94□□□□□ -0.82
SDCBP-212ENST00000523483 NAGPAQ9UK23 515 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 SSU72P8A0A1W2PR75 194 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 CLDN5O00501 218 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 FTLP02792 175 aaPredicted RBP9.94□□□□□ -0.82
SDCBP-212ENST00000523483 GALTP07902 379 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 NSFP46459 744 aaKnown RBP9.94□□□□□ -0.82
SDCBP-212ENST00000523483 FMO1Q01740 532 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 CCAR2Q8N163 923 aaKnown RBP9.94□□□□□ -0.82
SDCBP-212ENST00000523483 KBTBD7Q8WVZ9 684 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 PPP1R13BQ96KQ4 1090 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 PCDHB18PQ96TA0 734 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 MTIF3Q9H2K0 278 aaKnown RBP9.94□□□□□ -0.82
SDCBP-212ENST00000523483 RNF216Q9NWF9 866 aaPredicted RBP9.94□□□□□ -0.82
SDCBP-212ENST00000523483 CHD7Q9P2D1 2997 aa9.94□□□□□ -0.82
SDCBP-212ENST00000523483 EFCAB14O75071 495 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 PRKCIP41743 596 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 MAGEA10P43363 369 aaPredicted RBP9.93□□□□□ -0.82
SDCBP-212ENST00000523483 DSC1Q08554 894 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 BMS1Q14692 1282 aaKnown RBP9.93□□□□□ -0.82
SDCBP-212ENST00000523483 LLGL2Q6P1M3 1020 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 SLC2A14Q8TDB8 520 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 UROC1Q96N76 676 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 LACRTQ9GZZ8 138 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 VRTNQ9H8Y1 702 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 CERS4Q9HA82 394 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 HESX1Q9UBX0 185 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 NOCTQ9UK39 431 aaKnown RBP9.93□□□□□ -0.82
SDCBP-212ENST00000523483 TSPAN16Q9UKR8 245 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 STXBP5LQ9Y2K9 1186 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 MRPL42Q9Y6G3 142 aaKnown RBP9.93□□□□□ -0.82
SDCBP-212ENST00000523483 GJB5O95377 273 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 TNNT1P13805 278 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 MYOGP15173 224 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 GOLGA7BQ2TAP0 167 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 PPP1R26Q5T8A7 1209 aaPredicted RBP9.93□□□□□ -0.82
SDCBP-212ENST00000523483 FUT10Q6P4F1 479 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 KCNT2Q6UVM3 1135 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 WHAMMQ8TF30 809 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 CTNNBL1Q8WYA6 563 aaPredicted RBP9.93□□□□□ -0.82
SDCBP-212ENST00000523483 TNIP3Q96KP6 325 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 TSPAN18Q96SJ8 248 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 SYT15Q9BQS2 421 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 REXO2Q9Y3B8 237 aaKnown RBP9.93□□□□□ -0.82
SDCBP-212ENST00000523483 RCCD1A6NED2 376 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 EIF3CLB5ME19 914 aaKnown RBP9.93□□□□□ -0.82
SDCBP-212ENST00000523483 BAIAP3O94812 1187 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 H2AFZP0C0S5 128 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 CPB1P15086 417 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 CAPN2P17655 700 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 CHRNB2P17787 502 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 RPL17P18621 184 aaKnown RBP9.93□□□□□ -0.82
SDCBP-212ENST00000523483 FAM109BQ6ICB4 259 aaPredicted RBP9.93□□□□□ -0.82
SDCBP-212ENST00000523483 H2AFVQ71UI9 128 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 FIBCD1Q8N539 461 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 B3GALNT2Q8NCR0 500 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 AUTS2Q8WXX7 1259 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 ZNF558Q96NG5 402 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 TMEM209Q96SK2 561 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 EIF3CQ99613 913 aaKnown RBP9.93□□□□□ -0.82
SDCBP-212ENST00000523483 ZSWIM1Q9BR11 485 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 GDAP2Q9NXN4 497 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 NME7Q9Y5B8 376 aa9.93□□□□□ -0.82
SDCBP-212ENST00000523483 MYBPHLA2RUH7 354 aa9.92□□□□□ -0.82
SDCBP-212ENST00000523483 LCHNA4D1U4 455 aa9.92□□□□□ -0.82
SDCBP-212ENST00000523483 TMEM110-MUSTN1A8MSY1 372 aa9.92□□□□□ -0.82
SDCBP-212ENST00000523483 GOLGA8SH3BPF8 625 aa9.92□□□□□ -0.82
SDCBP-212ENST00000523483 MCCD1P59942 119 aaPredicted RBP9.92□□□□□ -0.82
SDCBP-212ENST00000523483 RNASE9P60153 205 aaKnown RBP9.92□□□□□ -0.82
SDCBP-212ENST00000523483 CTXN3Q4LDR2 81 aa9.92□□□□□ -0.82
SDCBP-212ENST00000523483 CYP4A22Q5TCH4 519 aa9.92□□□□□ -0.82
SDCBP-212ENST00000523483 DENND1BQ6P3S1 775 aa9.92□□□□□ -0.82
SDCBP-212ENST00000523483 PRSS55Q6UWB4 352 aaPredicted RBP9.92□□□□□ -0.82
SDCBP-212ENST00000523483 MMS22LQ6ZRQ5 1243 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms